RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 METP08581 1390 aa13.6□□□□□ -0.23
MINDY3-206ENST00000477891 NBR1Q14596 966 aa13.59□□□□□ -0.23
MINDY3-206ENST00000477891 TXNDC2Q86VQ3 553 aa13.59□□□□□ -0.23
MINDY3-206ENST00000477891 MYH16Q9H6N6 1097 aa13.59□□□□□ -0.23
MINDY3-206ENST00000477891 C8orf34Q49A92 452 aa13.59□□□□□ -0.23
MINDY3-206ENST00000477891 MED14O60244 1454 aa13.59□□□□□ -0.23
MINDY3-206ENST00000477891 DIAPH1O60610 1272 aaKnown RBP13.58□□□□□ -0.23
MINDY3-206ENST00000477891 PNPLA6Q8IY17 1366 aa13.58□□□□□ -0.24
MINDY3-206ENST00000477891 PPM1GO15355 546 aaPredicted RBP13.58□□□□□ -0.24
MINDY3-206ENST00000477891 POLKQ9UBT6 870 aa13.58□□□□□ -0.24
MINDY3-206ENST00000477891 NCKAP5LQ9HCH0 1330 aa13.58□□□□□ -0.24
MINDY3-206ENST00000477891 ESF1Q9H501 851 aaKnown RBP13.57□□□□□ -0.24
MINDY3-206ENST00000477891 WASLO00401 505 aaPredicted RBP13.57□□□□□ -0.24
MINDY3-206ENST00000477891 FAM161AQ3B820 660 aa13.57□□□□□ -0.24
MINDY3-206ENST00000477891 PCDHB15Q9Y5E8 787 aa13.57□□□□□ -0.24
MINDY3-206ENST00000477891 ADGRB2O60241 1585 aa13.57□□□□□ -0.24
MINDY3-206ENST00000477891 MAPK8IP3Q9UPT6 1336 aa13.56□□□□□ -0.24
MINDY3-206ENST00000477891 RIPK4P57078 832 aa13.56□□□□□ -0.24
MINDY3-206ENST00000477891 DLC1Q96QB1 1528 aa13.56□□□□□ -0.24
MINDY3-206ENST00000477891 EXOSC9Q06265 439 aaKnown RBP13.56□□□□□ -0.24
MINDY3-206ENST00000477891 ZRANB1Q9UGI0 708 aa13.56□□□□□ -0.24
MINDY3-206ENST00000477891 SETD1AO15047 1707 aaKnown RBP13.55□□□□□ -0.24
MINDY3-206ENST00000477891 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.55□□□□□ -0.24
MINDY3-206ENST00000477891 NME9Q86XW9 330 aa13.54□□□□□ -0.24
MINDY3-206ENST00000477891 NRXN3Q9Y4C0 1643 aa13.54□□□□□ -0.24
MINDY3-206ENST00000477891 ANKRD26Q9UPS8 1709 aa13.53□□□□□ -0.24
MINDY3-206ENST00000477891 FCHSD2O94868 740 aa13.53□□□□□ -0.24
MINDY3-206ENST00000477891 NUDT16Q96DE0 195 aaKnown RBP13.53□□□□□ -0.24
MINDY3-206ENST00000477891 EMILIN1Q9Y6C2 1016 aa13.53□□□□□ -0.24
MINDY3-206ENST00000477891 SSH1Q8WYL5 1049 aa13.52□□□□□ -0.24
MINDY3-206ENST00000477891 CPSF1Q10570 1443 aaKnown RBP13.52□□□□□ -0.24
MINDY3-206ENST00000477891 PPIP5K1Q6PFW1 1433 aa13.52□□□□□ -0.24
MINDY3-206ENST00000477891 ATP7BP35670 1465 aa13.52□□□□□ -0.25
MINDY3-206ENST00000477891 PRKAR2BP31323 418 aa13.52□□□□□ -0.25
MINDY3-206ENST00000477891 PHACTR3Q96KR7 559 aa13.52□□□□□ -0.25
MINDY3-206ENST00000477891 RSPH6AQ9H0K4 717 aa13.52□□□□□ -0.25
MINDY3-206ENST00000477891 KIF13AQ9H1H9 1805 aa13.51□□□□□ -0.25
MINDY3-206ENST00000477891 HMOX1P09601 288 aa13.51□□□□□ -0.25
MINDY3-206ENST00000477891 ZKSCAN2Q63HK3 967 aa13.51□□□□□ -0.25
MINDY3-206ENST00000477891 SMC4Q9NTJ3 1288 aa13.51□□□□□ -0.25
MINDY3-206ENST00000477891 CCDC61Q9Y6R9 512 aa13.51□□□□□ -0.25
MINDY3-206ENST00000477891 CT47B1P0C2W7 299 aaPredicted RBP13.51□□□□□ -0.25
MINDY3-206ENST00000477891 MVPQ14764 893 aaKnown RBP13.51□□□□□ -0.25
MINDY3-206ENST00000477891 SLC4A3P48751 1232 aa13.5□□□□□ -0.25
MINDY3-206ENST00000477891 TNRQ92752 1358 aa13.5□□□□□ -0.25
MINDY3-206ENST00000477891 IL16Q14005 1332 aa13.5□□□□□ -0.25
MINDY3-206ENST00000477891 TRIM27P14373 513 aa13.5□□□□□ -0.25
MINDY3-206ENST00000477891 HDGFP51858 240 aaKnown RBP13.5□□□□□ -0.25
MINDY3-206ENST00000477891 DZIP1LQ8IYY4 767 aaKnown RBP13.5□□□□□ -0.25
MINDY3-206ENST00000477891 PNNQ9H307 717 aaKnown RBP13.5□□□□□ -0.25
MINDY3-206ENST00000477891 KIF20BQ96Q89 1820 aa13.49□□□□□ -0.25
MINDY3-206ENST00000477891 LAS1LQ9Y4W2 734 aaKnown RBP13.49□□□□□ -0.25
MINDY3-206ENST00000477891 PRR36Q9H6K5 1346 aa13.49□□□□□ -0.25
MINDY3-206ENST00000477891 TMEM2Q9UHN6 1383 aa13.49□□□□□ -0.25
MINDY3-206ENST00000477891 LTKP29376 864 aa13.48□□□□□ -0.25
MINDY3-206ENST00000477891 IL13P35225 146 aa13.48□□□□□ -0.25
MINDY3-206ENST00000477891 CEBPAP49715 358 aaPredicted RBP13.48□□□□□ -0.25
MINDY3-206ENST00000477891 AAMPQ13685 434 aa13.48□□□□□ -0.25
MINDY3-206ENST00000477891 RRS1Q15050 365 aaKnown RBP13.48□□□□□ -0.25
MINDY3-206ENST00000477891 FTSJ3Q8IY81 847 aaKnown RBP13.48□□□□□ -0.25
MINDY3-206ENST00000477891 PMFBP1Q8TBY8 1022 aa13.48□□□□□ -0.25
MINDY3-206ENST00000477891 SIRT1Q96EB6 747 aa13.48□□□□□ -0.25
MINDY3-206ENST00000477891 THUMPD2Q9BTF0 503 aaKnown RBP13.48□□□□□ -0.25
MINDY3-206ENST00000477891 NOB1Q9ULX3 412 aaKnown RBP13.48□□□□□ -0.25
MINDY3-206ENST00000477891 EDC4Q6P2E9 1401 aaKnown RBP13.48□□□□□ -0.25
MINDY3-206ENST00000477891 MAP2P11137 1827 aaKnown RBP13.48□□□□□ -0.25
MINDY3-206ENST00000477891 ROBO2Q9HCK4 1378 aa13.47□□□□□ -0.25
MINDY3-206ENST00000477891 FAM135BQ49AJ0 1406 aa13.47□□□□□ -0.25
MINDY3-206ENST00000477891 SEC24BO95487 1268 aa13.47□□□□□ -0.25
MINDY3-206ENST00000477891 DDRGK1Q96HY6 314 aa13.47□□□□□ -0.25
MINDY3-206ENST00000477891 CPS1P31327 1500 aa13.47□□□□□ -0.25
MINDY3-206ENST00000477891 LRRC7Q96NW7 1537 aa13.47□□□□□ -0.25
MINDY3-206ENST00000477891 NUTM2FA1L443 756 aa13.46□□□□□ -0.25
MINDY3-206ENST00000477891 ATF7IPQ6VMQ6 1270 aa13.46□□□□□ -0.25
MINDY3-206ENST00000477891 PDZRN3Q9UPQ7 1066 aa13.46□□□□□ -0.25
MINDY3-206ENST00000477891 TECPR2O15040 1411 aa13.46□□□□□ -0.25
MINDY3-206ENST00000477891 COG3Q96JB2 828 aa13.46□□□□□ -0.26
MINDY3-206ENST00000477891 RWDD1Q9H446 243 aaPredicted RBP13.46□□□□□ -0.26
MINDY3-206ENST00000477891 NFE2L2Q16236 605 aa13.45□□□□□ -0.26
MINDY3-206ENST00000477891 ADAMTS13Q76LX8 1427 aa13.45□□□□□ -0.26
MINDY3-206ENST00000477891 SLC26A8Q96RN1 970 aa13.45□□□□□ -0.26
MINDY3-206ENST00000477891 USP19O94966 1318 aa13.45□□□□□ -0.26
MINDY3-206ENST00000477891 CDC42BPGQ6DT37 1551 aa13.44□□□□□ -0.26
MINDY3-206ENST00000477891 NEFMP07197 916 aa13.44□□□□□ -0.26
MINDY3-206ENST00000477891 DEKP35659 375 aaKnown RBP13.44□□□□□ -0.26
MINDY3-206ENST00000477891 ITPRIPQ8IWB1 547 aa13.44□□□□□ -0.26
MINDY3-206ENST00000477891 TMEM57Q8N5G2 664 aa13.44□□□□□ -0.26
MINDY3-206ENST00000477891 ZNF692Q9BU19 519 aaPredicted RBP13.44□□□□□ -0.26
MINDY3-206ENST00000477891 AATKQ6ZMQ8 1374 aa13.43□□□□□ -0.26
MINDY3-206ENST00000477891 PLPPR3Q6T4P5 718 aa13.43□□□□□ -0.26
MINDY3-206ENST00000477891 TSPYL6Q8N831 410 aa13.43□□□□□ -0.26
MINDY3-206ENST00000477891 ELL2O00472 640 aaPredicted RBP13.41□□□□□ -0.26
MINDY3-206ENST00000477891 VAMP4O75379 141 aa13.41□□□□□ -0.26
MINDY3-206ENST00000477891 DDX19BQ9UMR2 479 aa13.41□□□□□ -0.26
MINDY3-206ENST00000477891 UBR1Q8IWV7 1749 aa13.41□□□□□ -0.26
MINDY3-206ENST00000477891 ACEP12821 1306 aa13.41□□□□□ -0.26
MINDY3-206ENST00000477891 FAM83GA6ND36 823 aa13.41□□□□□ -0.26
MINDY3-206ENST00000477891 ALDH1L2Q3SY69 923 aa13.41□□□□□ -0.26
MINDY3-206ENST00000477891 ZBTB40Q9NUA8 1239 aa13.41□□□□□ -0.26
MINDY3-206ENST00000477891 RTL5Q5HYW3 569 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms