RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 SETBP1Q9Y6X0 1596 aa9.92□□□□□ -0.82
LINC00173-202ENST00000477702 PRDM15P57071 1507 aaPredicted RBP9.92□□□□□ -0.82
LINC00173-202ENST00000477702 TMEM2Q9UHN6 1383 aa9.91□□□□□ -0.82
LINC00173-202ENST00000477702 GRXCR2A6NFK2 248 aa9.91□□□□□ -0.82
LINC00173-202ENST00000477702 TBC1D12O60347 775 aa9.91□□□□□ -0.82
LINC00173-202ENST00000477702 TIAM1Q13009 1591 aa9.91□□□□□ -0.82
LINC00173-202ENST00000477702 CCDC141Q6ZP82 1450 aa9.91□□□□□ -0.82
LINC00173-202ENST00000477702 FGD6Q6ZV73 1430 aa9.9□□□□□ -0.82
LINC00173-202ENST00000477702 DOK7Q18PE1 504 aa9.9□□□□□ -0.82
LINC00173-202ENST00000477702 RBM26Q5T8P6 1007 aaKnown RBP9.9□□□□□ -0.82
LINC00173-202ENST00000477702 NUDT7P0C024 238 aa9.89□□□□□ -0.83
LINC00173-202ENST00000477702 C14orf37Q86TY3 774 aa9.89□□□□□ -0.83
LINC00173-202ENST00000477702 QTRT2Q9H974 415 aaKnown RBP9.89□□□□□ -0.83
LINC00173-202ENST00000477702 NKTRP30414 1462 aaKnown RBP9.88□□□□□ -0.83
LINC00173-202ENST00000477702 PRIM1P49642 420 aaKnown RBP9.88□□□□□ -0.83
LINC00173-202ENST00000477702 RBM6P78332 1123 aaKnown RBP9.88□□□□□ -0.83
LINC00173-202ENST00000477702 GPR153Q6NV75 609 aa9.88□□□□□ -0.83
LINC00173-202ENST00000477702 C8orf37Q96NL8 207 aa9.88□□□□□ -0.83
LINC00173-202ENST00000477702 CAMSAP2Q08AD1 1489 aa9.87□□□□□ -0.83
LINC00173-202ENST00000477702 TSPY4P0CV99 314 aa9.87□□□□□ -0.83
LINC00173-202ENST00000477702 TSPY10P0CW01 314 aa9.87□□□□□ -0.83
LINC00173-202ENST00000477702 ZNF710Q8N1W2 664 aa9.87□□□□□ -0.83
LINC00173-202ENST00000477702 ANO8Q9HCE9 1232 aaPredicted RBP9.87□□□□□ -0.83
LINC00173-202ENST00000477702 CEP152O94986 1710 aa9.87□□□□□ -0.83
LINC00173-202ENST00000477702 SHPRHQ149N8 1683 aa9.87□□□□□ -0.83
LINC00173-202ENST00000477702 PIK3C2BO00750 1634 aa9.86□□□□□ -0.83
LINC00173-202ENST00000477702 PTGER2P43116 358 aa9.86□□□□□ -0.83
LINC00173-202ENST00000477702 TET3O43151 1660 aa9.86□□□□□ -0.83
LINC00173-202ENST00000477702 ATAD2Q6PL18 1390 aa9.86□□□□□ -0.83
LINC00173-202ENST00000477702 MROH1Q8NDA8 1641 aa9.85□□□□□ -0.83
LINC00173-202ENST00000477702 NWD1Q149M9 1564 aa9.85□□□□□ -0.83
LINC00173-202ENST00000477702 TULP1O00294 542 aaPredicted RBP9.85□□□□□ -0.83
LINC00173-202ENST00000477702 OSBPP22059 807 aa9.85□□□□□ -0.83
LINC00173-202ENST00000477702 RSPH4AQ5TD94 716 aa9.85□□□□□ -0.83
LINC00173-202ENST00000477702 SMYD5Q6GMV2 418 aa9.85□□□□□ -0.83
LINC00173-202ENST00000477702 KDM5AP29375 1690 aaKnown RBP9.84□□□□□ -0.83
LINC00173-202ENST00000477702 EFCAB6Q5THR3 1501 aa9.84□□□□□ -0.83
LINC00173-202ENST00000477702 IDI1Q13907 227 aa9.84□□□□□ -0.83
LINC00173-202ENST00000477702 AHDC1Q5TGY3 1603 aaPredicted RBP9.84□□□□□ -0.83
LINC00173-202ENST00000477702 RIMBP2O15034 1052 aa9.83□□□□□ -0.84
LINC00173-202ENST00000477702 ATF3P18847 181 aa9.83□□□□□ -0.84
LINC00173-202ENST00000477702 BRINP3Q76B58 766 aa9.83□□□□□ -0.84
LINC00173-202ENST00000477702 ADAMTS2O95450 1211 aa9.82□□□□□ -0.84
LINC00173-202ENST00000477702 NGLY1Q96IV0 654 aa9.82□□□□□ -0.84
LINC00173-202ENST00000477702 DIP2AQ14689 1571 aa9.82□□□□□ -0.84
LINC00173-202ENST00000477702 CEP162Q5TB80 1403 aa9.82□□□□□ -0.84
LINC00173-202ENST00000477702 EP400Q96L91 3159 aa9.81□□□□□ -0.84
LINC00173-202ENST00000477702 MAST1Q9Y2H9 1570 aa9.81□□□□□ -0.84
LINC00173-202ENST00000477702 ZNF316A6NFI3 1004 aaPredicted RBP9.81□□□□□ -0.84
LINC00173-202ENST00000477702 SNPHO15079 494 aa9.81□□□□□ -0.84
LINC00173-202ENST00000477702 ZC3H15Q8WU90 426 aaKnown RBP9.81□□□□□ -0.84
LINC00173-202ENST00000477702 ZSWIM6Q9HCJ5 1215 aa9.81□□□□□ -0.84
LINC00173-202ENST00000477702 PCDHGA10Q9Y5H3 936 aa9.81□□□□□ -0.84
LINC00173-202ENST00000477702 EHBP1L1Q8N3D4 1523 aa9.81□□□□□ -0.84
LINC00173-202ENST00000477702 ARHGAP31Q2M1Z3 1444 aa9.81□□□□□ -0.84
LINC00173-202ENST00000477702 C19orf44Q9H6X5 657 aa9.8□□□□□ -0.84
LINC00173-202ENST00000477702 LHX6Q9UPM6 363 aa9.8□□□□□ -0.84
LINC00173-202ENST00000477702 ARHGEF5Q12774 1597 aa9.8□□□□□ -0.84
LINC00173-202ENST00000477702 EIF2AK4Q9P2K8 1649 aaKnown RBP9.79□□□□□ -0.84
LINC00173-202ENST00000477702 DDX17Q92841 729 aaKnown RBP9.79□□□□□ -0.84
LINC00173-202ENST00000477702 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.79□□□□□ -0.84
LINC00173-202ENST00000477702 PPP1R15AO75807 674 aaPredicted RBP9.78□□□□□ -0.84
LINC00173-202ENST00000477702 HOXB1P14653 301 aaPredicted RBP9.78□□□□□ -0.84
LINC00173-202ENST00000477702 GPIHBP1Q8IV16 184 aa9.78□□□□□ -0.84
LINC00173-202ENST00000477702 CHD2O14647 1828 aaKnown RBP9.77□□□□□ -0.84
LINC00173-202ENST00000477702 SETD5Q9C0A6 1442 aa9.77□□□□□ -0.85
LINC00173-202ENST00000477702 PHF14O94880 888 aa9.77□□□□□ -0.85
LINC00173-202ENST00000477702 FOSBP53539 338 aa9.77□□□□□ -0.85
LINC00173-202ENST00000477702 ZNF454Q8N9F8 522 aa9.77□□□□□ -0.85
LINC00173-202ENST00000477702 LRRC59Q96AG4 307 aaKnown RBP9.77□□□□□ -0.85
LINC00173-202ENST00000477702 USP21Q9UK80 565 aa9.77□□□□□ -0.85
LINC00173-202ENST00000477702 PNPLA6Q8IY17 1366 aa9.76□□□□□ -0.85
LINC00173-202ENST00000477702 NCOA3Q9Y6Q9 1424 aa9.76□□□□□ -0.85
LINC00173-202ENST00000477702 NUTM2FA1L443 756 aa9.76□□□□□ -0.85
LINC00173-202ENST00000477702 ST18O60284 1047 aa9.76□□□□□ -0.85
LINC00173-202ENST00000477702 CDHR5Q9HBB8 845 aa9.76□□□□□ -0.85
LINC00173-202ENST00000477702 ASXL1Q8IXJ9 1541 aa9.76□□□□□ -0.85
LINC00173-202ENST00000477702 PLEKHG1Q9ULL1 1385 aa9.75□□□□□ -0.85
LINC00173-202ENST00000477702 GPR37O15354 613 aa9.75□□□□□ -0.85
LINC00173-202ENST00000477702 TSR1Q2NL82 804 aaKnown RBP9.75□□□□□ -0.85
LINC00173-202ENST00000477702 DEFB132Q7Z7B7 95 aa9.75□□□□□ -0.85
LINC00173-202ENST00000477702 CCDC125Q86Z20 511 aa9.75□□□□□ -0.85
LINC00173-202ENST00000477702 RRP7BPQ9NSQ0 103 aa9.75□□□□□ -0.85
LINC00173-202ENST00000477702 TRPC5Q9UL62 973 aaPredicted RBP9.75□□□□□ -0.85
LINC00173-202ENST00000477702 TBX22Q9Y458 520 aa9.75□□□□□ -0.85
LINC00173-202ENST00000477702 ADGRB3O60242 1522 aa9.75□□□□□ -0.85
LINC00173-202ENST00000477702 DUOX2Q9NRD8 1548 aa9.74□□□□□ -0.85
LINC00173-202ENST00000477702 EN1Q05925 392 aaPredicted RBP9.74□□□□□ -0.85
LINC00173-202ENST00000477702 FAM163AQ96GL9 167 aaPredicted RBP9.74□□□□□ -0.85
LINC00173-202ENST00000477702 KANK1Q14678 1352 aa9.74□□□□□ -0.85
LINC00173-202ENST00000477702 KIF15Q9NS87 1388 aa9.74□□□□□ -0.85
LINC00173-202ENST00000477702 RIMS2Q9UQ26 1411 aa9.73□□□□□ -0.85
LINC00173-202ENST00000477702 PSDA5PKW4 1024 aaPredicted RBP9.73□□□□□ -0.85
LINC00173-202ENST00000477702 MAP3K7O43318 606 aa9.73□□□□□ -0.85
LINC00173-202ENST00000477702 TYW1BQ6NUM6 668 aa9.73□□□□□ -0.85
LINC00173-202ENST00000477702 MARVELD3Q96A59 401 aa9.73□□□□□ -0.85
LINC00173-202ENST00000477702 EPAS1Q99814 870 aa9.73□□□□□ -0.85
LINC00173-202ENST00000477702 ADAM33Q9BZ11 813 aa9.73□□□□□ -0.85
LINC00173-202ENST00000477702 ZFYVE9O95405 1425 aa9.73□□□□□ -0.85
LINC00173-202ENST00000477702 ZMYND10O75800 440 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms