RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 TRPM3Q9HCF6 1732 aaPredicted RBP18.26■□□□□ 0.51
TOP3A-205ENST00000477508 USP6P35125 1406 aa18.25■□□□□ 0.51
TOP3A-205ENST00000477508 CPSF1Q10570 1443 aaKnown RBP18.25■□□□□ 0.51
TOP3A-205ENST00000477508 LMOD2Q6P5Q4 547 aa18.25■□□□□ 0.51
TOP3A-205ENST00000477508 SLC12A5Q9H2X9 1139 aa18.25■□□□□ 0.51
TOP3A-205ENST00000477508 COL22A1Q8NFW1 1626 aaPredicted RBP18.24■□□□□ 0.51
TOP3A-205ENST00000477508 KTN1Q86UP2 1357 aaKnown RBP18.23■□□□□ 0.51
TOP3A-205ENST00000477508 NCBP3Q53F19 620 aaKnown RBP18.23■□□□□ 0.51
TOP3A-205ENST00000477508 AKAP12Q02952 1782 aa18.22■□□□□ 0.51
TOP3A-205ENST00000477508 TTC21AQ8NDW8 1320 aa18.22■□□□□ 0.51
TOP3A-205ENST00000477508 ALS2Q96Q42 1657 aa18.22■□□□□ 0.51
TOP3A-205ENST00000477508 NUTM2BA6NNL0 878 aaPredicted RBP18.21■□□□□ 0.51
TOP3A-205ENST00000477508 NUTM2EB1AL46 878 aaPredicted RBP18.21■□□□□ 0.51
TOP3A-205ENST00000477508 NUTM2AQ8IVF1 878 aaPredicted RBP18.21■□□□□ 0.51
TOP3A-205ENST00000477508 ABTB2Q8N961 1025 aa18.21■□□□□ 0.51
TOP3A-205ENST00000477508 SSH2Q76I76 1423 aa18.21■□□□□ 0.51
TOP3A-205ENST00000477508 ANKRD36BQ8N2N9 1353 aa18.2■□□□□ 0.5
TOP3A-205ENST00000477508 MED1Q15648 1581 aaPredicted RBP18.2■□□□□ 0.5
TOP3A-205ENST00000477508 TTC21BQ7Z4L5 1316 aa18.2■□□□□ 0.5
TOP3A-205ENST00000477508 CD163L1Q9NR16 1453 aa18.2■□□□□ 0.5
TOP3A-205ENST00000477508 HAP1P54257 671 aaPredicted RBP18.19■□□□□ 0.5
TOP3A-205ENST00000477508 MEX3CQ5U5Q3 659 aaKnown RBP18.19■□□□□ 0.5
TOP3A-205ENST00000477508 NLRP13Q86W25 1043 aa18.19■□□□□ 0.5
TOP3A-205ENST00000477508 A0A1W2PP64 1363 aa18.18■□□□□ 0.5
TOP3A-205ENST00000477508 MON2Q7Z3U7 1717 aa18.18■□□□□ 0.5
TOP3A-205ENST00000477508 EDC4Q6P2E9 1401 aaKnown RBP18.18■□□□□ 0.5
TOP3A-205ENST00000477508 POLR3GLQ9BT43 218 aa18.18■□□□□ 0.5
TOP3A-205ENST00000477508 LRP6O75581 1613 aa18.16■□□□□ 0.5
TOP3A-205ENST00000477508 C11orf95C9JLR9 678 aaPredicted RBP18.15■□□□□ 0.5
TOP3A-205ENST00000477508 NLRP6P59044 892 aa18.15■□□□□ 0.5
TOP3A-205ENST00000477508 NRKQ7Z2Y5 1582 aa18.14■□□□□ 0.49
TOP3A-205ENST00000477508 ADAMTS2O95450 1211 aa18.14■□□□□ 0.49
TOP3A-205ENST00000477508 CABLES1Q8TDN4 633 aa18.14■□□□□ 0.49
TOP3A-205ENST00000477508 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.13■□□□□ 0.49
TOP3A-205ENST00000477508 USP19O94966 1318 aa18.13■□□□□ 0.49
TOP3A-205ENST00000477508 KIF7Q2M1P5 1343 aa18.13■□□□□ 0.49
TOP3A-205ENST00000477508 MYOM1P52179 1685 aa18.12■□□□□ 0.49
TOP3A-205ENST00000477508 NUTM2GQ5VZR2 741 aa18.12■□□□□ 0.49
TOP3A-205ENST00000477508 NGLY1Q96IV0 654 aa18.11■□□□□ 0.49
TOP3A-205ENST00000477508 C8orf37Q96NL8 207 aa18.11■□□□□ 0.49
TOP3A-205ENST00000477508 USP31Q70CQ4 1352 aa18.11■□□□□ 0.49
TOP3A-205ENST00000477508 ABCA3Q99758 1704 aa18.1■□□□□ 0.49
TOP3A-205ENST00000477508 PIK3C2AO00443 1686 aa18.1■□□□□ 0.49
TOP3A-205ENST00000477508 PLEKHG5O94827 1062 aa18.1■□□□□ 0.49
TOP3A-205ENST00000477508 KCNH5Q8NCM2 988 aa18.1■□□□□ 0.49
TOP3A-205ENST00000477508 MARF1Q9Y4F3 1742 aaKnown RBP18.09■□□□□ 0.49
TOP3A-205ENST00000477508 CCDC7Q96M83 1385 aa18.09■□□□□ 0.49
TOP3A-205ENST00000477508 GCP02774 474 aa18.09■□□□□ 0.49
TOP3A-205ENST00000477508 ZNF772Q68DY9 489 aaPredicted RBP18.09■□□□□ 0.49
TOP3A-205ENST00000477508 CRYBG1Q9Y4K1 1723 aa18.09■□□□□ 0.49
TOP3A-205ENST00000477508 NME9Q86XW9 330 aa18.08■□□□□ 0.48
TOP3A-205ENST00000477508 FNBP4Q8N3X1 1017 aaPredicted RBP18.08■□□□□ 0.48
TOP3A-205ENST00000477508 WASHC2AQ641Q2 1341 aa18.07■□□□□ 0.48
TOP3A-205ENST00000477508 CARD14Q9BXL6 1004 aa18.07■□□□□ 0.48
TOP3A-205ENST00000477508 PANK3Q9H999 370 aa18.07■□□□□ 0.48
TOP3A-205ENST00000477508 PHRF1Q9P1Y6 1649 aaKnown RBP18.07■□□□□ 0.48
TOP3A-205ENST00000477508 SLIT3O75094 1523 aa18.07■□□□□ 0.48
TOP3A-205ENST00000477508 CPDO75976 1380 aa18.06■□□□□ 0.48
TOP3A-205ENST00000477508 AFF2P51816 1311 aa18.06■□□□□ 0.48
TOP3A-205ENST00000477508 CGNL1Q0VF96 1302 aa18.06■□□□□ 0.48
TOP3A-205ENST00000477508 COG3Q96JB2 828 aa18.06■□□□□ 0.48
TOP3A-205ENST00000477508 NSD3Q9BZ95 1437 aa18.06■□□□□ 0.48
TOP3A-205ENST00000477508 USP54Q70EL1 1684 aa18.06■□□□□ 0.48
TOP3A-205ENST00000477508 PRDM11Q9NQV5 511 aa18.05■□□□□ 0.48
TOP3A-205ENST00000477508 FAM83GA6ND36 823 aa18.04■□□□□ 0.48
TOP3A-205ENST00000477508 FYB1O15117 783 aa18.04■□□□□ 0.48
TOP3A-205ENST00000477508 ZC3H6P61129 1189 aaKnown RBP18.04■□□□□ 0.48
TOP3A-205ENST00000477508 USP21Q9UK80 565 aa18.04■□□□□ 0.48
TOP3A-205ENST00000477508 KIAA0232Q92628 1395 aa18.04■□□□□ 0.48
TOP3A-205ENST00000477508 OVOS2A0A0J9YW53 1432 aa18.03■□□□□ 0.48
TOP3A-205ENST00000477508 OVOS2Q6IE36 1432 aa18.03■□□□□ 0.48
TOP3A-205ENST00000477508 COL14A1Q05707 1796 aaKnown RBP18.02■□□□□ 0.48
TOP3A-205ENST00000477508 RGS17Q9UGC6 210 aaPredicted RBP18.02■□□□□ 0.48
TOP3A-205ENST00000477508 ZRANB1Q9UGI0 708 aa18.02■□□□□ 0.48
TOP3A-205ENST00000477508 KNSTRNQ9Y448 316 aa18.02■□□□□ 0.48
TOP3A-205ENST00000477508 SLIT2O94813 1529 aa18.02■□□□□ 0.47
TOP3A-205ENST00000477508 UNC5CLQ8IV45 518 aa18.01■□□□□ 0.47
TOP3A-205ENST00000477508 NWD2Q9ULI1 1742 aa18.01■□□□□ 0.47
TOP3A-205ENST00000477508 GGNBP2Q9H3C7 697 aa18■□□□□ 0.47
TOP3A-205ENST00000477508 TRPC5Q9UL62 973 aaPredicted RBP18■□□□□ 0.47
TOP3A-205ENST00000477508 NSD2O96028 1365 aa18■□□□□ 0.47
TOP3A-205ENST00000477508 KIF20BQ96Q89 1820 aa18■□□□□ 0.47
TOP3A-205ENST00000477508 ARHGEF25Q86VW2 580 aa17.99■□□□□ 0.47
TOP3A-205ENST00000477508 AATKQ6ZMQ8 1374 aa17.99■□□□□ 0.47
TOP3A-205ENST00000477508 BCL9LQ86UU0 1499 aa17.99■□□□□ 0.47
TOP3A-205ENST00000477508 QTRT2Q9H974 415 aaKnown RBP17.98■□□□□ 0.47
TOP3A-205ENST00000477508 BTG4Q9NY30 223 aa17.98■□□□□ 0.47
TOP3A-205ENST00000477508 NFAT5O94916 1531 aa17.98■□□□□ 0.47
TOP3A-205ENST00000477508 SOX12O15370 315 aa17.97■□□□□ 0.47
TOP3A-205ENST00000477508 CHRNA2Q15822 529 aa17.97■□□□□ 0.47
TOP3A-205ENST00000477508 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.97■□□□□ 0.47
TOP3A-205ENST00000477508 PLCH1Q4KWH8 1693 aa17.96■□□□□ 0.47
TOP3A-205ENST00000477508 POTEAQ6S8J7 498 aa17.96■□□□□ 0.47
TOP3A-205ENST00000477508 ABCC6O95255 1503 aa17.95■□□□□ 0.46
TOP3A-205ENST00000477508 ZBTB7CA1YPR0 619 aa17.95■□□□□ 0.46
TOP3A-205ENST00000477508 PER1O15534 1290 aaPredicted RBP17.95■□□□□ 0.46
TOP3A-205ENST00000477508 EVA1CP58658 441 aa17.95■□□□□ 0.46
TOP3A-205ENST00000477508 VPS72Q15906 364 aa17.95■□□□□ 0.46
TOP3A-205ENST00000477508 ATRNO75882 1429 aa17.95■□□□□ 0.46
TOP3A-205ENST00000477508 RXRBP28702 533 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms