RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 PCDHB15Q9Y5E8 787 aa27.09■■□□□ 1.93
LIMS2-214ENST00000476932 CDC42BPGQ6DT37 1551 aa27.08■■□□□ 1.93
LIMS2-214ENST00000476932 A2ML1A8K2U0 1454 aa27.08■■□□□ 1.93
LIMS2-214ENST00000476932 PPM1GO15355 546 aaPredicted RBP27.08■■□□□ 1.93
LIMS2-214ENST00000476932 MAPK8IP3Q9UPT6 1336 aa27.08■■□□□ 1.93
LIMS2-214ENST00000476932 PNPLA6Q8IY17 1366 aa27.08■■□□□ 1.92
LIMS2-214ENST00000476932 NEFMP07197 916 aa27.07■■□□□ 1.92
LIMS2-214ENST00000476932 TMPOP42166 694 aaKnown RBP27.07■■□□□ 1.92
LIMS2-214ENST00000476932 TRIM35Q9UPQ4 493 aa27.07■■□□□ 1.92
LIMS2-214ENST00000476932 USP35Q9P2H5 1018 aa27.06■■□□□ 1.92
LIMS2-214ENST00000476932 U2SURPO15042 1029 aaKnown RBP27.06■■□□□ 1.92
LIMS2-214ENST00000476932 CDK19Q9BWU1 502 aa27.06■■□□□ 1.92
LIMS2-214ENST00000476932 SLC4A3P48751 1232 aa27.05■■□□□ 1.92
LIMS2-214ENST00000476932 TSR2Q969E8 191 aaKnown RBP27.05■■□□□ 1.92
LIMS2-214ENST00000476932 FAM69CQ0P6D2 419 aa27.05■■□□□ 1.92
LIMS2-214ENST00000476932 PMFBP1Q8TBY8 1022 aa27.04■■□□□ 1.92
LIMS2-214ENST00000476932 USP19O94966 1318 aa27.04■■□□□ 1.92
LIMS2-214ENST00000476932 NRXN3Q9Y4C0 1643 aa27.03■■□□□ 1.92
LIMS2-214ENST00000476932 CT47B1P0C2W7 299 aaPredicted RBP27.03■■□□□ 1.92
LIMS2-214ENST00000476932 LRRC7Q96NW7 1537 aa27.02■■□□□ 1.92
LIMS2-214ENST00000476932 HDGFL2Q7Z4V5 671 aaPredicted RBP27.01■■□□□ 1.91
LIMS2-214ENST00000476932 CABP1Q9NZU7 370 aa27.01■■□□□ 1.91
LIMS2-214ENST00000476932 ATP7BP35670 1465 aa27.01■■□□□ 1.91
LIMS2-214ENST00000476932 RIMS2Q9UQ26 1411 aa27■■□□□ 1.91
LIMS2-214ENST00000476932 MVPQ14764 893 aaKnown RBP27■■□□□ 1.91
LIMS2-214ENST00000476932 EXOSC9Q06265 439 aaKnown RBP26.99■■□□□ 1.91
LIMS2-214ENST00000476932 MAP2P11137 1827 aaKnown RBP26.99■■□□□ 1.91
LIMS2-214ENST00000476932 ZMYM3Q14202 1370 aa26.99■■□□□ 1.91
LIMS2-214ENST00000476932 IL16Q14005 1332 aa26.99■■□□□ 1.91
LIMS2-214ENST00000476932 ZKSCAN2Q63HK3 967 aa26.99■■□□□ 1.91
LIMS2-214ENST00000476932 STAG3Q9UJ98 1225 aa26.99■■□□□ 1.91
LIMS2-214ENST00000476932 PPP6R1Q9UPN7 881 aa26.99■■□□□ 1.91
LIMS2-214ENST00000476932 DIAPH1O60610 1272 aaKnown RBP26.97■■□□□ 1.91
LIMS2-214ENST00000476932 SEC24BO95487 1268 aa26.96■■□□□ 1.91
LIMS2-214ENST00000476932 WAPLQ7Z5K2 1190 aa26.95■■□□□ 1.9
LIMS2-214ENST00000476932 DZIP1LQ8IYY4 767 aaKnown RBP26.95■■□□□ 1.9
LIMS2-214ENST00000476932 PDZRN3Q9UPQ7 1066 aa26.95■■□□□ 1.9
LIMS2-214ENST00000476932 FAM135BQ49AJ0 1406 aa26.94■■□□□ 1.9
LIMS2-214ENST00000476932 SSH1Q8WYL5 1049 aa26.93■■□□□ 1.9
LIMS2-214ENST00000476932 SMC4Q9NTJ3 1288 aa26.93■■□□□ 1.9
LIMS2-214ENST00000476932 TRIM27P14373 513 aa26.92■■□□□ 1.9
LIMS2-214ENST00000476932 RIPK4P57078 832 aa26.92■■□□□ 1.9
LIMS2-214ENST00000476932 KNDC1Q76NI1 1749 aa26.91■■□□□ 1.9
LIMS2-214ENST00000476932 RWDD1Q9H446 243 aaPredicted RBP26.91■■□□□ 1.9
LIMS2-214ENST00000476932 DAXXQ9UER7 740 aaPredicted RBP26.91■■□□□ 1.9
LIMS2-214ENST00000476932 FTSJ3Q8IY81 847 aaKnown RBP26.91■■□□□ 1.9
LIMS2-214ENST00000476932 CPSF1Q10570 1443 aaKnown RBP26.9■■□□□ 1.9
LIMS2-214ENST00000476932 NFKBIBQ15653 356 aa26.9■■□□□ 1.9
LIMS2-214ENST00000476932 POLKQ9UBT6 870 aa26.9■■□□□ 1.9
LIMS2-214ENST00000476932 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.89■■□□□ 1.9
LIMS2-214ENST00000476932 MON2Q7Z3U7 1717 aa26.89■■□□□ 1.89
LIMS2-214ENST00000476932 RSPH6AQ9H0K4 717 aa26.88■■□□□ 1.89
LIMS2-214ENST00000476932 FBLN1P23142 703 aa26.88■■□□□ 1.89
LIMS2-214ENST00000476932 FCHSD2O94868 740 aa26.87■■□□□ 1.89
LIMS2-214ENST00000476932 PNNQ9H307 717 aaKnown RBP26.87■■□□□ 1.89
LIMS2-214ENST00000476932 ATF7IPQ6VMQ6 1270 aa26.86■■□□□ 1.89
LIMS2-214ENST00000476932 EDC4Q6P2E9 1401 aaKnown RBP26.86■■□□□ 1.89
LIMS2-214ENST00000476932 METP08581 1390 aa26.85■■□□□ 1.89
LIMS2-214ENST00000476932 AKAP12Q02952 1782 aa26.85■■□□□ 1.89
LIMS2-214ENST00000476932 PPIP5K1Q6PFW1 1433 aa26.84■■□□□ 1.89
LIMS2-214ENST00000476932 NOB1Q9ULX3 412 aaKnown RBP26.84■■□□□ 1.89
LIMS2-214ENST00000476932 PRKAR2BP31323 418 aa26.83■■□□□ 1.89
LIMS2-214ENST00000476932 CDK12Q9NYV4 1490 aaPredicted RBP26.83■■□□□ 1.89
LIMS2-214ENST00000476932 DDX19BQ9UMR2 479 aa26.82■■□□□ 1.88
LIMS2-214ENST00000476932 DLG5Q8TDM6 1919 aa26.82■■□□□ 1.88
LIMS2-214ENST00000476932 HDAC1Q13547 482 aaPredicted RBP26.82■■□□□ 1.88
LIMS2-214ENST00000476932 MLECQ14165 292 aa26.82■■□□□ 1.88
LIMS2-214ENST00000476932 C3P01024 1663 aa26.81■■□□□ 1.88
LIMS2-214ENST00000476932 WASLO00401 505 aaPredicted RBP26.81■■□□□ 1.88
LIMS2-214ENST00000476932 CPS1P31327 1500 aa26.81■■□□□ 1.88
LIMS2-214ENST00000476932 ITPRIPQ8IWB1 547 aa26.81■■□□□ 1.88
LIMS2-214ENST00000476932 ITSN1Q15811 1721 aa26.81■■□□□ 1.88
LIMS2-214ENST00000476932 KIF13AQ9H1H9 1805 aa26.8■■□□□ 1.88
LIMS2-214ENST00000476932 TECPR2O15040 1411 aa26.8■■□□□ 1.88
LIMS2-214ENST00000476932 KIF16BQ96L93 1317 aa26.8■■□□□ 1.88
LIMS2-214ENST00000476932 TMEM57Q8N5G2 664 aa26.79■■□□□ 1.88
LIMS2-214ENST00000476932 PHACTR3Q96KR7 559 aa26.78■■□□□ 1.88
LIMS2-214ENST00000476932 EMILIN1Q9Y6C2 1016 aa26.78■■□□□ 1.88
LIMS2-214ENST00000476932 ALDH1L2Q3SY69 923 aa26.78■■□□□ 1.88
LIMS2-214ENST00000476932 NME9Q86XW9 330 aa26.77■■□□□ 1.88
LIMS2-214ENST00000476932 AATKQ6ZMQ8 1374 aa26.77■■□□□ 1.88
LIMS2-214ENST00000476932 TBC1D32Q96NH3 1257 aa26.77■■□□□ 1.88
LIMS2-214ENST00000476932 NFE2L2Q16236 605 aa26.76■■□□□ 1.87
LIMS2-214ENST00000476932 ZBTB40Q9NUA8 1239 aa26.76■■□□□ 1.87
LIMS2-214ENST00000476932 IL13P35225 146 aa26.76■■□□□ 1.87
LIMS2-214ENST00000476932 ZRANB1Q9UGI0 708 aa26.76■■□□□ 1.87
LIMS2-214ENST00000476932 HMOX1P09601 288 aa26.75■■□□□ 1.87
LIMS2-214ENST00000476932 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.74■■□□□ 1.87
LIMS2-214ENST00000476932 UBR1Q8IWV7 1749 aa26.74■■□□□ 1.87
LIMS2-214ENST00000476932 TXNDC2Q86VQ3 553 aa26.74■■□□□ 1.87
LIMS2-214ENST00000476932 SMC5Q8IY18 1101 aa26.74■■□□□ 1.87
LIMS2-214ENST00000476932 BRPF1P55201 1214 aaPredicted RBP26.73■■□□□ 1.87
LIMS2-214ENST00000476932 NCKAP5LQ9HCH0 1330 aa26.73■■□□□ 1.87
LIMS2-214ENST00000476932 IPO8O15397 1037 aaKnown RBP26.72■■□□□ 1.87
LIMS2-214ENST00000476932 NUDT16Q96DE0 195 aaKnown RBP26.72■■□□□ 1.87
LIMS2-214ENST00000476932 NRKQ7Z2Y5 1582 aa26.72■■□□□ 1.87
LIMS2-214ENST00000476932 THUMPD2Q9BTF0 503 aaKnown RBP26.72■■□□□ 1.87
LIMS2-214ENST00000476932 FRAT2O75474 233 aaPredicted RBP26.7■■□□□ 1.87
LIMS2-214ENST00000476932 ZNF428Q96B54 188 aa26.7■■□□□ 1.86
LIMS2-214ENST00000476932 SIRT1Q96EB6 747 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms