RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 PSDA5PKW4 1024 aaPredicted RBP16.36■□□□□ 0.21
NUDCD3-206ENST00000475952 NBPF1Q3BBV0 1214 aa16.36■□□□□ 0.21
NUDCD3-206ENST00000475952 SBNO1A3KN83 1393 aa16.36■□□□□ 0.21
NUDCD3-206ENST00000475952 VPS72Q15906 364 aa16.35■□□□□ 0.21
NUDCD3-206ENST00000475952 PMFBP1Q8TBY8 1022 aa16.35■□□□□ 0.21
NUDCD3-206ENST00000475952 PRR36Q9H6K5 1346 aa16.35■□□□□ 0.21
NUDCD3-206ENST00000475952 ARHGEF10O15013 1369 aa16.35■□□□□ 0.21
NUDCD3-206ENST00000475952 ONECUT3O60422 494 aaPredicted RBP16.34■□□□□ 0.21
NUDCD3-206ENST00000475952 GPRASP1Q5JY77 1395 aa16.34■□□□□ 0.21
NUDCD3-206ENST00000475952 KRT27Q7Z3Y8 459 aa16.33■□□□□ 0.2
NUDCD3-206ENST00000475952 CENPJQ9HC77 1338 aaPredicted RBP16.33■□□□□ 0.2
NUDCD3-206ENST00000475952 ROCK2O75116 1388 aaKnown RBP16.33■□□□□ 0.2
NUDCD3-206ENST00000475952 TONSLQ96HA7 1378 aa16.33■□□□□ 0.2
NUDCD3-206ENST00000475952 PHRF1Q9P1Y6 1649 aaKnown RBP16.33■□□□□ 0.2
NUDCD3-206ENST00000475952 HAP1P54257 671 aaPredicted RBP16.3■□□□□ 0.2
NUDCD3-206ENST00000475952 LMOD2Q6P5Q4 547 aa16.3■□□□□ 0.2
NUDCD3-206ENST00000475952 NGDNQ8NEJ9 315 aaKnown RBP16.3■□□□□ 0.2
NUDCD3-206ENST00000475952 NUDT16Q96DE0 195 aaKnown RBP16.3■□□□□ 0.2
NUDCD3-206ENST00000475952 CDK19Q9BWU1 502 aa16.3■□□□□ 0.2
NUDCD3-206ENST00000475952 AKAP12Q02952 1782 aa16.3■□□□□ 0.2
NUDCD3-206ENST00000475952 COL14A1Q05707 1796 aaKnown RBP16.3■□□□□ 0.2
NUDCD3-206ENST00000475952 BAG6P46379 1132 aa16.29■□□□□ 0.2
NUDCD3-206ENST00000475952 CABLES1Q8TDN4 633 aa16.29■□□□□ 0.2
NUDCD3-206ENST00000475952 CCDC9Q9Y3X0 531 aaKnown RBP16.29■□□□□ 0.2
NUDCD3-206ENST00000475952 THSD7AQ9UPZ6 1657 aa16.28■□□□□ 0.2
NUDCD3-206ENST00000475952 DISP2A7MBM2 1401 aa16.27■□□□□ 0.19
NUDCD3-206ENST00000475952 POLR3AO14802 1390 aaPredicted RBP16.26■□□□□ 0.19
NUDCD3-206ENST00000475952 SRPK2P78362 688 aaKnown RBP16.26■□□□□ 0.19
NUDCD3-206ENST00000475952 CCDC61Q9Y6R9 512 aa16.26■□□□□ 0.19
NUDCD3-206ENST00000475952 PPIP5K1Q6PFW1 1433 aa16.26■□□□□ 0.19
NUDCD3-206ENST00000475952 PLEKHG5O94827 1062 aa16.25■□□□□ 0.19
NUDCD3-206ENST00000475952 EN1Q05925 392 aaPredicted RBP16.25■□□□□ 0.19
NUDCD3-206ENST00000475952 A0A0G2JS52 829 aa16.24■□□□□ 0.19
NUDCD3-206ENST00000475952 PAK3O75914 559 aaPredicted RBP16.24■□□□□ 0.19
NUDCD3-206ENST00000475952 MYT1Q01538 1121 aa16.24■□□□□ 0.19
NUDCD3-206ENST00000475952 R3HDM1Q15032 1099 aaKnown RBP16.24■□□□□ 0.19
NUDCD3-206ENST00000475952 FAM98CQ17RN3 349 aaKnown RBP16.24■□□□□ 0.19
NUDCD3-206ENST00000475952 RREB1Q92766 1687 aa16.24■□□□□ 0.19
NUDCD3-206ENST00000475952 MON2Q7Z3U7 1717 aa16.23■□□□□ 0.19
NUDCD3-206ENST00000475952 NRKQ7Z2Y5 1582 aa16.23■□□□□ 0.19
NUDCD3-206ENST00000475952 FAM83GA6ND36 823 aa16.23■□□□□ 0.19
NUDCD3-206ENST00000475952 NBPF8Q3BBV2 869 aa16.23■□□□□ 0.19
NUDCD3-206ENST00000475952 ACEP12821 1306 aa16.22■□□□□ 0.19
NUDCD3-206ENST00000475952 EVC2Q86UK5 1308 aa16.22■□□□□ 0.19
NUDCD3-206ENST00000475952 NUP188Q5SRE5 1749 aa16.22■□□□□ 0.19
NUDCD3-206ENST00000475952 PLEKHG3A1L390 1219 aa16.21■□□□□ 0.19
NUDCD3-206ENST00000475952 FAM182BQ5T319 152 aa16.21■□□□□ 0.19
NUDCD3-206ENST00000475952 CABP2Q9NPB3 220 aa16.21■□□□□ 0.19
NUDCD3-206ENST00000475952 CARD11Q9BXL7 1154 aa16.2■□□□□ 0.18
NUDCD3-206ENST00000475952 SBNO2Q9Y2G9 1366 aa16.2■□□□□ 0.18
NUDCD3-206ENST00000475952 PIK3C2AO00443 1686 aa16.2■□□□□ 0.18
NUDCD3-206ENST00000475952 BRD4O60885 1362 aaPredicted RBP16.19■□□□□ 0.18
NUDCD3-206ENST00000475952 BTG4Q9NY30 223 aa16.19■□□□□ 0.18
NUDCD3-206ENST00000475952 UTRNP46939 3433 aa16.17■□□□□ 0.18
NUDCD3-206ENST00000475952 EZH2Q15910 746 aaKnown RBP16.17■□□□□ 0.18
NUDCD3-206ENST00000475952 USP6P35125 1406 aa16.17■□□□□ 0.18
NUDCD3-206ENST00000475952 SPATA31A5Q5VU36 1347 aa16.17■□□□□ 0.18
NUDCD3-206ENST00000475952 SPATA31A7Q8IWB4 1347 aa16.17■□□□□ 0.18
NUDCD3-206ENST00000475952 LMO7Q8WWI1 1683 aa16.14■□□□□ 0.18
NUDCD3-206ENST00000475952 YY1P25490 414 aa16.14■□□□□ 0.17
NUDCD3-206ENST00000475952 ABTB2Q8N961 1025 aa16.14■□□□□ 0.17
NUDCD3-206ENST00000475952 CAMKK2Q96RR4 588 aa16.14■□□□□ 0.17
NUDCD3-206ENST00000475952 CABP1Q9NZU7 370 aa16.14■□□□□ 0.17
NUDCD3-206ENST00000475952 USP54Q70EL1 1684 aa16.14■□□□□ 0.17
NUDCD3-206ENST00000475952 CLSPNQ9HAW4 1339 aa16.14■□□□□ 0.17
NUDCD3-206ENST00000475952 PRDM11Q9NQV5 511 aa16.13■□□□□ 0.17
NUDCD3-206ENST00000475952 RGPD5Q99666 1765 aa16.13■□□□□ 0.17
NUDCD3-206ENST00000475952 NUTM2GQ5VZR2 741 aa16.12■□□□□ 0.17
NUDCD3-206ENST00000475952 SLIT3O75094 1523 aa16.12■□□□□ 0.17
NUDCD3-206ENST00000475952 PARD3Q8TEW0 1356 aa16.12■□□□□ 0.17
NUDCD3-206ENST00000475952 KIAA0232Q92628 1395 aa16.12■□□□□ 0.17
NUDCD3-206ENST00000475952 CAMTA1Q9Y6Y1 1673 aa16.11■□□□□ 0.17
NUDCD3-206ENST00000475952 LTN1O94822 1766 aa16.11■□□□□ 0.17
NUDCD3-206ENST00000475952 PCGF6Q9BYE7 350 aa16.11■□□□□ 0.17
NUDCD3-206ENST00000475952 USP19O94966 1318 aa16.11■□□□□ 0.17
NUDCD3-206ENST00000475952 WNK3Q9BYP7 1800 aa16.1■□□□□ 0.17
NUDCD3-206ENST00000475952 TRIM37O94972 964 aa16.1■□□□□ 0.17
NUDCD3-206ENST00000475952 NLRP13Q86W25 1043 aa16.1■□□□□ 0.17
NUDCD3-206ENST00000475952 SSH2Q76I76 1423 aa16.1■□□□□ 0.17
NUDCD3-206ENST00000475952 SPATA31A1Q5TZJ5 1347 aa16.09■□□□□ 0.17
NUDCD3-206ENST00000475952 CPSF1Q10570 1443 aaKnown RBP16.09■□□□□ 0.17
NUDCD3-206ENST00000475952 ZNF692Q9BU19 519 aaPredicted RBP16.08■□□□□ 0.16
NUDCD3-206ENST00000475952 CPDO75976 1380 aa16.08■□□□□ 0.16
NUDCD3-206ENST00000475952 COL18A1P39060 1754 aa16.08■□□□□ 0.16
NUDCD3-206ENST00000475952 ZC3H6P61129 1189 aaKnown RBP16.07■□□□□ 0.16
NUDCD3-206ENST00000475952 FAM196AQ6ZSG2 479 aa16.07■□□□□ 0.16
NUDCD3-206ENST00000475952 TIMELESSQ9UNS1 1208 aa16.07■□□□□ 0.16
NUDCD3-206ENST00000475952 KTN1Q86UP2 1357 aaKnown RBP16.07■□□□□ 0.16
NUDCD3-206ENST00000475952 RGPD3A6NKT7 1758 aaPredicted RBP16.07■□□□□ 0.16
NUDCD3-206ENST00000475952 RGPD4Q7Z3J3 1758 aa16.07■□□□□ 0.16
NUDCD3-206ENST00000475952 TTC21AQ8NDW8 1320 aa16.06■□□□□ 0.16
NUDCD3-206ENST00000475952 SLC24A1O60721 1099 aa16.06■□□□□ 0.16
NUDCD3-206ENST00000475952 APBA3O96018 575 aa16.06■□□□□ 0.16
NUDCD3-206ENST00000475952 CD163L1Q9NR16 1453 aa16.05■□□□□ 0.16
NUDCD3-206ENST00000475952 USP47Q96K76 1375 aa16.05■□□□□ 0.16
NUDCD3-206ENST00000475952 NLRP6P59044 892 aa16.05■□□□□ 0.16
NUDCD3-206ENST00000475952 CHRNA2Q15822 529 aa16.05■□□□□ 0.16
NUDCD3-206ENST00000475952 SBF2Q86WG5 1849 aa16.05■□□□□ 0.16
NUDCD3-206ENST00000475952 CASZ1Q86V15 1759 aa16.05■□□□□ 0.16
NUDCD3-206ENST00000475952 PARP4Q9UKK3 1724 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms