RNA–Protein interactions for RNA: ENST00000473550.1

DUBR-203, DPPA2 upstream binding RNA, humanhuman

TSL 3 BASIC

Gene DUBR, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-203ENST00000473550 A0A1W2PP64 1363 aa13.22□□□□□ -0.29
DUBR-203ENST00000473550 AKAP12Q02952 1782 aa13.22□□□□□ -0.29
DUBR-203ENST00000473550 CD163L1Q9NR16 1453 aa13.22□□□□□ -0.29
DUBR-203ENST00000473550 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
DUBR-203ENST00000473550 NSD3Q9BZ95 1437 aa13.22□□□□□ -0.29
DUBR-203ENST00000473550 ZNF335Q9H4Z2 1342 aaPredicted RBP13.21□□□□□ -0.29
DUBR-203ENST00000473550 PRR36Q9H6K5 1346 aa13.21□□□□□ -0.29
DUBR-203ENST00000473550 MIER1Q8N108 512 aa13.21□□□□□ -0.29
DUBR-203ENST00000473550 MON2Q7Z3U7 1717 aa13.21□□□□□ -0.3
DUBR-203ENST00000473550 KIF1AQ12756 1690 aa13.21□□□□□ -0.3
DUBR-203ENST00000473550 POLR3AO14802 1390 aaPredicted RBP13.2□□□□□ -0.3
DUBR-203ENST00000473550 AMER1Q5JTC6 1135 aaPredicted RBP13.2□□□□□ -0.3
DUBR-203ENST00000473550 CARD14Q9BXL6 1004 aa13.2□□□□□ -0.3
DUBR-203ENST00000473550 PARD3Q8TEW0 1356 aa13.2□□□□□ -0.3
DUBR-203ENST00000473550 XIRP1Q702N8 1843 aaKnown RBP13.18□□□□□ -0.3
DUBR-203ENST00000473550 ACEP12821 1306 aa13.18□□□□□ -0.3
DUBR-203ENST00000473550 PHF8Q9UPP1 1060 aa13.18□□□□□ -0.3
DUBR-203ENST00000473550 C1orf167Q5SNV9 1468 aa13.17□□□□□ -0.3
DUBR-203ENST00000473550 TTC21AQ8NDW8 1320 aa13.17□□□□□ -0.3
DUBR-203ENST00000473550 MYBBP1AQ9BQG0 1328 aaKnown RBP13.17□□□□□ -0.3
DUBR-203ENST00000473550 NGDNQ8NEJ9 315 aaKnown RBP13.17□□□□□ -0.3
DUBR-203ENST00000473550 RGPD8O14715 1765 aaPredicted RBP13.17□□□□□ -0.3
DUBR-203ENST00000473550 ANKRD26Q9UPS8 1709 aa13.16□□□□□ -0.3
DUBR-203ENST00000473550 USP6P35125 1406 aa13.16□□□□□ -0.3
DUBR-203ENST00000473550 MST1RQ04912 1400 aa13.16□□□□□ -0.3
DUBR-203ENST00000473550 LTBP4Q8N2S1 1624 aa13.16□□□□□ -0.3
DUBR-203ENST00000473550 KIF20BQ96Q89 1820 aa13.16□□□□□ -0.3
DUBR-203ENST00000473550 NRKQ7Z2Y5 1582 aa13.15□□□□□ -0.3
DUBR-203ENST00000473550 NUTM2FA1L443 756 aa13.15□□□□□ -0.3
DUBR-203ENST00000473550 ESCO1Q5FWF5 840 aa13.15□□□□□ -0.3
DUBR-203ENST00000473550 RBM33Q96EV2 1170 aaKnown RBP13.15□□□□□ -0.3
DUBR-203ENST00000473550 CC2D1BQ5T0F9 858 aaKnown RBP13.14□□□□□ -0.31
DUBR-203ENST00000473550 MORC1Q86VD1 984 aa13.14□□□□□ -0.31
DUBR-203ENST00000473550 NLRP13Q86W25 1043 aa13.14□□□□□ -0.31
DUBR-203ENST00000473550 IQSEC2Q5JU85 1478 aa13.14□□□□□ -0.31
DUBR-203ENST00000473550 SSH2Q76I76 1423 aa13.13□□□□□ -0.31
DUBR-203ENST00000473550 TTC21BQ7Z4L5 1316 aa13.13□□□□□ -0.31
DUBR-203ENST00000473550 FYB1O15117 783 aa13.12□□□□□ -0.31
DUBR-203ENST00000473550 PSME1Q06323 249 aa13.12□□□□□ -0.31
DUBR-203ENST00000473550 PMFBP1Q8TBY8 1022 aa13.12□□□□□ -0.31
DUBR-203ENST00000473550 SLAIN2Q9P270 581 aa13.11□□□□□ -0.31
DUBR-203ENST00000473550 FBXO3Q9UK99 471 aa13.11□□□□□ -0.31
DUBR-203ENST00000473550 NPHP3Q7Z494 1330 aa13.11□□□□□ -0.31
DUBR-203ENST00000473550 USP31Q70CQ4 1352 aa13.1□□□□□ -0.31
DUBR-203ENST00000473550 USP54Q70EL1 1684 aa13.1□□□□□ -0.31
DUBR-203ENST00000473550 COG3Q96JB2 828 aa13.1□□□□□ -0.31
DUBR-203ENST00000473550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.09□□□□□ -0.31
DUBR-203ENST00000473550 AATKQ6ZMQ8 1374 aa13.08□□□□□ -0.31
DUBR-203ENST00000473550 PPP2R1AP30153 589 aa13.08□□□□□ -0.32
DUBR-203ENST00000473550 ORAI2Q96SN7 254 aa13.08□□□□□ -0.32
DUBR-203ENST00000473550 MRS2Q9HD23 443 aa13.08□□□□□ -0.32
DUBR-203ENST00000473550 SBNO1A3KN83 1393 aa13.07□□□□□ -0.32
DUBR-203ENST00000473550 CFAP53Q96M91 514 aa13.07□□□□□ -0.32
DUBR-203ENST00000473550 GGNBP2Q9H3C7 697 aa13.07□□□□□ -0.32
DUBR-203ENST00000473550 OVOS2A0A0J9YW53 1432 aa13.06□□□□□ -0.32
DUBR-203ENST00000473550 OVOS2Q6IE36 1432 aa13.06□□□□□ -0.32
DUBR-203ENST00000473550 FOXO3O43524 673 aa13.06□□□□□ -0.32
DUBR-203ENST00000473550 CNGB1Q14028 1251 aaPredicted RBP13.06□□□□□ -0.32
DUBR-203ENST00000473550 KRT28Q7Z3Y7 464 aa13.06□□□□□ -0.32
DUBR-203ENST00000473550 PROM2Q8N271 834 aa13.06□□□□□ -0.32
DUBR-203ENST00000473550 TOM1O60784 492 aa13.05□□□□□ -0.32
DUBR-203ENST00000473550 BRINP3Q76B58 766 aa13.05□□□□□ -0.32
DUBR-203ENST00000473550 NME9Q86XW9 330 aa13.05□□□□□ -0.32
DUBR-203ENST00000473550 PIK3C2AO00443 1686 aa13.05□□□□□ -0.32
DUBR-203ENST00000473550 INSRP06213 1382 aa13.05□□□□□ -0.32
DUBR-203ENST00000473550 TRPM3Q9HCF6 1732 aaPredicted RBP13.05□□□□□ -0.32
DUBR-203ENST00000473550 SPDYE2BA6NHP3 402 aa13.04□□□□□ -0.32
DUBR-203ENST00000473550 PAK3O75914 559 aaPredicted RBP13.04□□□□□ -0.32
DUBR-203ENST00000473550 SPDYE6P0CI01 402 aa13.04□□□□□ -0.32
DUBR-203ENST00000473550 SPDYE2Q495Y8 402 aa13.04□□□□□ -0.32
DUBR-203ENST00000473550 ABTB2Q8N961 1025 aa13.04□□□□□ -0.32
DUBR-203ENST00000473550 KCNH5Q8NCM2 988 aa13.04□□□□□ -0.32
DUBR-203ENST00000473550 KIF24Q5T7B8 1368 aa13.04□□□□□ -0.32
DUBR-203ENST00000473550 NLRP6P59044 892 aa13.03□□□□□ -0.32
DUBR-203ENST00000473550 ARHGEF10O15013 1369 aa13.03□□□□□ -0.32
DUBR-203ENST00000473550 NHSL1Q5SYE7 1610 aa13.02□□□□□ -0.32
DUBR-203ENST00000473550 SMG6Q86US8 1419 aaKnown RBP13.02□□□□□ -0.33
DUBR-203ENST00000473550 PXDNQ92626 1479 aa13.02□□□□□ -0.33
DUBR-203ENST00000473550 ALS2Q96Q42 1657 aa13.02□□□□□ -0.33
DUBR-203ENST00000473550 SOS2Q07890 1332 aaPredicted RBP13.01□□□□□ -0.33
DUBR-203ENST00000473550 TNS3Q68CZ2 1445 aa13.01□□□□□ -0.33
DUBR-203ENST00000473550 AHDC1Q5TGY3 1603 aaPredicted RBP13□□□□□ -0.33
DUBR-203ENST00000473550 MTHFSP49914 203 aa13□□□□□ -0.33
DUBR-203ENST00000473550 PNISRQ8TF01 805 aaKnown RBP13□□□□□ -0.33
DUBR-203ENST00000473550 SLIT3O75094 1523 aa12.99□□□□□ -0.33
DUBR-203ENST00000473550 CDK12Q9NYV4 1490 aaPredicted RBP12.99□□□□□ -0.33
DUBR-203ENST00000473550 PNPLA6Q8IY17 1366 aa12.99□□□□□ -0.33
DUBR-203ENST00000473550 SPATA31A3Q5VYP0 1347 aa12.99□□□□□ -0.33
DUBR-203ENST00000473550 TNNT2P45379 298 aaPredicted RBP12.99□□□□□ -0.33
DUBR-203ENST00000473550 WDR43Q15061 677 aaKnown RBP eCLIP12.99□□□□□ -0.33
DUBR-203ENST00000473550 NUDCQ9Y266 331 aa12.99□□□□□ -0.33
DUBR-203ENST00000473550 ROBO1Q9Y6N7 1651 aa12.99□□□□□ -0.33
DUBR-203ENST00000473550 USP19O94966 1318 aa12.98□□□□□ -0.33
DUBR-203ENST00000473550 MAP2P11137 1827 aaKnown RBP12.98□□□□□ -0.33
DUBR-203ENST00000473550 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
DUBR-203ENST00000473550 POLKQ9UBT6 870 aa12.98□□□□□ -0.33
DUBR-203ENST00000473550 MED1Q15648 1581 aaPredicted RBP12.98□□□□□ -0.33
DUBR-203ENST00000473550 RTL1A6NKG5 1358 aa12.97□□□□□ -0.33
DUBR-203ENST00000473550 MARF1Q9Y4F3 1742 aaKnown RBP12.97□□□□□ -0.33
DUBR-203ENST00000473550 PNNQ9H307 717 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms