RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 TMEM57Q8N5G2 664 aa17.92■□□□□ 0.46
NHLRC3-204ENST00000473371 PUS7Q96PZ0 661 aaKnown RBP17.92■□□□□ 0.46
NHLRC3-204ENST00000473371 DIP2BQ9P265 1576 aa17.92■□□□□ 0.46
NHLRC3-204ENST00000473371 TRIM35Q9UPQ4 493 aa17.92■□□□□ 0.46
NHLRC3-204ENST00000473371 RPGRIP1LQ68CZ1 1315 aa17.91■□□□□ 0.46
NHLRC3-204ENST00000473371 UBE2Q2Q8WVN8 375 aa17.91■□□□□ 0.46
NHLRC3-204ENST00000473371 DDX11L8A8MPP1 907 aa17.91■□□□□ 0.46
NHLRC3-204ENST00000473371 PLEKHF1Q96S99 279 aa17.91■□□□□ 0.46
NHLRC3-204ENST00000473371 CD109Q6YHK3 1445 aa17.91■□□□□ 0.46
NHLRC3-204ENST00000473371 NUTM2DQ5VT03 806 aaPredicted RBP17.91■□□□□ 0.46
NHLRC3-204ENST00000473371 GGT6Q6P531 493 aa17.91■□□□□ 0.46
NHLRC3-204ENST00000473371 SAFB2Q14151 953 aaKnown RBP eCLIP17.9■□□□□ 0.46
NHLRC3-204ENST00000473371 KIDINS220Q9ULH0 1771 aa17.9■□□□□ 0.46
NHLRC3-204ENST00000473371 NPATQ14207 1427 aa17.9■□□□□ 0.46
NHLRC3-204ENST00000473371 MRE11P49959 708 aa17.89■□□□□ 0.46
NHLRC3-204ENST00000473371 TULP4Q9NRJ4 1543 aa17.89■□□□□ 0.45
NHLRC3-204ENST00000473371 IPO8O15397 1037 aaKnown RBP17.89■□□□□ 0.45
NHLRC3-204ENST00000473371 GGNBP2Q9H3C7 697 aa17.89■□□□□ 0.45
NHLRC3-204ENST00000473371 ZBTB40Q9NUA8 1239 aa17.89■□□□□ 0.45
NHLRC3-204ENST00000473371 RIPK4P57078 832 aa17.88■□□□□ 0.45
NHLRC3-204ENST00000473371 ZNF692Q9BU19 519 aaPredicted RBP17.88■□□□□ 0.45
NHLRC3-204ENST00000473371 LNPKQ9C0E8 428 aa17.88■□□□□ 0.45
NHLRC3-204ENST00000473371 IL16Q14005 1332 aa17.88■□□□□ 0.45
NHLRC3-204ENST00000473371 KIF16BQ96L93 1317 aa17.88■□□□□ 0.45
NHLRC3-204ENST00000473371 ABCC11Q96J66 1382 aa17.88■□□□□ 0.45
NHLRC3-204ENST00000473371 NUCB1Q02818 461 aa17.87■□□□□ 0.45
NHLRC3-204ENST00000473371 PNNQ9H307 717 aaKnown RBP17.87■□□□□ 0.45
NHLRC3-204ENST00000473371 RBM25P49756 843 aaKnown RBP17.86■□□□□ 0.45
NHLRC3-204ENST00000473371 HSP90AB1P08238 724 aaKnown RBP17.86■□□□□ 0.45
NHLRC3-204ENST00000473371 SRPK2P78362 688 aaKnown RBP17.86■□□□□ 0.45
NHLRC3-204ENST00000473371 RICTORQ6R327 1708 aa17.85■□□□□ 0.45
NHLRC3-204ENST00000473371 SNX21Q969T3 373 aa17.85■□□□□ 0.45
NHLRC3-204ENST00000473371 NAP1L5Q96NT1 182 aaPredicted RBP17.85■□□□□ 0.45
NHLRC3-204ENST00000473371 GRPEL1Q9HAV7 217 aa17.85■□□□□ 0.45
NHLRC3-204ENST00000473371 A0A1W2PP64 1363 aa17.85■□□□□ 0.45
NHLRC3-204ENST00000473371 VGFO15240 615 aaPredicted RBP17.85■□□□□ 0.45
NHLRC3-204ENST00000473371 CLCN1P35523 988 aa17.85■□□□□ 0.45
NHLRC3-204ENST00000473371 ARHGEF28Q8N1W1 1705 aaKnown RBP17.84■□□□□ 0.45
NHLRC3-204ENST00000473371 ASXL2Q76L83 1435 aa17.84■□□□□ 0.45
NHLRC3-204ENST00000473371 NCOA3Q9Y6Q9 1424 aa17.84■□□□□ 0.45
NHLRC3-204ENST00000473371 CHD1LQ86WJ1 897 aa17.84■□□□□ 0.45
NHLRC3-204ENST00000473371 DDIT3P35638 169 aa17.83■□□□□ 0.44
NHLRC3-204ENST00000473371 TNPO1Q92973 898 aaKnown RBP17.83■□□□□ 0.44
NHLRC3-204ENST00000473371 STK26Q9P289 416 aa17.83■□□□□ 0.44
NHLRC3-204ENST00000473371 COL3A1P02461 1466 aaPredicted RBP17.82■□□□□ 0.44
NHLRC3-204ENST00000473371 DIAPH1O60610 1272 aaKnown RBP17.82■□□□□ 0.44
NHLRC3-204ENST00000473371 ALDH1L2Q3SY69 923 aa17.82■□□□□ 0.44
NHLRC3-204ENST00000473371 GBP4Q96PP9 640 aa17.82■□□□□ 0.44
NHLRC3-204ENST00000473371 SENP3Q9H4L4 574 aaPredicted RBP17.82■□□□□ 0.44
NHLRC3-204ENST00000473371 ISY1Q9ULR0 285 aaKnown RBP17.82■□□□□ 0.44
NHLRC3-204ENST00000473371 CIZ1Q9ULV3 898 aaPredicted RBP17.82■□□□□ 0.44
NHLRC3-204ENST00000473371 HSP90AA1P07900 732 aaKnown RBP17.81■□□□□ 0.44
NHLRC3-204ENST00000473371 ANKRD45Q5TZF3 282 aa17.8■□□□□ 0.44
NHLRC3-204ENST00000473371 TERF2IPQ9NYB0 399 aa17.8■□□□□ 0.44
NHLRC3-204ENST00000473371 FYB1O15117 783 aa17.8■□□□□ 0.44
NHLRC3-204ENST00000473371 BMP2KLQ5H9B9 411 aa17.8■□□□□ 0.44
NHLRC3-204ENST00000473371 FRMPD1Q5SYB0 1578 aa17.79■□□□□ 0.44
NHLRC3-204ENST00000473371 CAMSAP1Q5T5Y3 1602 aa17.78■□□□□ 0.44
NHLRC3-204ENST00000473371 FOXD4L1Q9NU39 408 aa17.78■□□□□ 0.44
NHLRC3-204ENST00000473371 RAB3GAP1Q15042 981 aa17.77■□□□□ 0.44
NHLRC3-204ENST00000473371 SKOR2Q2VWA4 1001 aaPredicted RBP17.77■□□□□ 0.44
NHLRC3-204ENST00000473371 MINK1Q8N4C8 1332 aaPredicted RBP17.77■□□□□ 0.43
NHLRC3-204ENST00000473371 ABCC3O15438 1527 aa17.76■□□□□ 0.43
NHLRC3-204ENST00000473371 GCC1Q96CN9 775 aa17.76■□□□□ 0.43
NHLRC3-204ENST00000473371 C1orf115Q9H7X2 142 aa17.76■□□□□ 0.43
NHLRC3-204ENST00000473371 HECW2Q9P2P5 1572 aa17.76■□□□□ 0.43
NHLRC3-204ENST00000473371 PTMSP20962 102 aa17.76■□□□□ 0.43
NHLRC3-204ENST00000473371 CHMP4BQ9H444 224 aaKnown RBP17.76■□□□□ 0.43
NHLRC3-204ENST00000473371 NEXMIFQ5QGS0 1516 aa17.76■□□□□ 0.43
NHLRC3-204ENST00000473371 TRIM44Q96DX7 344 aaPredicted RBP17.76■□□□□ 0.43
NHLRC3-204ENST00000473371 ATAD2Q6PL18 1390 aa17.75■□□□□ 0.43
NHLRC3-204ENST00000473371 ESPNB1AK53 854 aa17.75■□□□□ 0.43
NHLRC3-204ENST00000473371 KIF2CQ99661 725 aa17.75■□□□□ 0.43
NHLRC3-204ENST00000473371 NEO1Q92859 1461 aa17.75■□□□□ 0.43
NHLRC3-204ENST00000473371 REREQ9P2R6 1566 aa17.75■□□□□ 0.43
NHLRC3-204ENST00000473371 K7ELQ4 463 aaPredicted RBP17.74■□□□□ 0.43
NHLRC3-204ENST00000473371 ZBTB7BO15156 539 aaPredicted RBP17.74■□□□□ 0.43
NHLRC3-204ENST00000473371 PPIP5K1Q6PFW1 1433 aa17.74■□□□□ 0.43
NHLRC3-204ENST00000473371 FCHSD2O94868 740 aa17.74■□□□□ 0.43
NHLRC3-204ENST00000473371 PRKAR2BP31323 418 aa17.74■□□□□ 0.43
NHLRC3-204ENST00000473371 HDGFL2Q7Z4V5 671 aaPredicted RBP17.74■□□□□ 0.43
NHLRC3-204ENST00000473371 GAS2L3Q86XJ1 694 aa17.74■□□□□ 0.43
NHLRC3-204ENST00000473371 ZNF428Q96B54 188 aa17.74■□□□□ 0.43
NHLRC3-204ENST00000473371 CD2BP2O95400 341 aaKnown RBP17.74■□□□□ 0.43
NHLRC3-204ENST00000473371 TBC1D9Q6ZT07 1266 aa17.74■□□□□ 0.43
NHLRC3-204ENST00000473371 MED14O60244 1454 aa17.73■□□□□ 0.43
NHLRC3-204ENST00000473371 ANKRD26Q9UPS8 1709 aa17.73■□□□□ 0.43
NHLRC3-204ENST00000473371 BRPF1P55201 1214 aaPredicted RBP17.72■□□□□ 0.43
NHLRC3-204ENST00000473371 POGZQ7Z3K3 1410 aa17.72■□□□□ 0.43
NHLRC3-204ENST00000473371 PRAM1Q96QH2 718 aa17.72■□□□□ 0.43
NHLRC3-204ENST00000473371 RBM42Q9BTD8 480 aaKnown RBP17.72■□□□□ 0.43
NHLRC3-204ENST00000473371 MRPL50Q8N5N7 158 aaKnown RBP17.72■□□□□ 0.43
NHLRC3-204ENST00000473371 PNPLA6Q8IY17 1366 aa17.71■□□□□ 0.43
NHLRC3-204ENST00000473371 MLH3Q9UHC1 1453 aa17.71■□□□□ 0.43
NHLRC3-204ENST00000473371 SIGLEC1Q9BZZ2 1709 aa17.71■□□□□ 0.43
NHLRC3-204ENST00000473371 VAMP4O75379 141 aa17.7■□□□□ 0.42
NHLRC3-204ENST00000473371 IDI1Q13907 227 aa17.7■□□□□ 0.42
NHLRC3-204ENST00000473371 ERBB4Q15303 1308 aa17.7■□□□□ 0.42
NHLRC3-204ENST00000473371 LRRC7Q96NW7 1537 aa17.7■□□□□ 0.42
NHLRC3-204ENST00000473371 PIK3C2BO00750 1634 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms