RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 NUTM2DQ5VT03 806 aaPredicted RBP12.87□□□□□ -0.35
RRP1B-202ENST00000470886 CFAP74Q9C0B2 1584 aa12.86□□□□□ -0.35
RRP1B-202ENST00000470886 BCAR3O75815 825 aa12.86□□□□□ -0.35
RRP1B-202ENST00000470886 HSP90AB4PQ58FF6 505 aa12.86□□□□□ -0.35
RRP1B-202ENST00000470886 NGDNQ8NEJ9 315 aaKnown RBP12.86□□□□□ -0.35
RRP1B-202ENST00000470886 TRPM1Q7Z4N2 1603 aa12.86□□□□□ -0.35
RRP1B-202ENST00000470886 MBD3O95983 291 aa12.86□□□□□ -0.35
RRP1B-202ENST00000470886 ATP7AQ04656 1500 aa12.86□□□□□ -0.35
RRP1B-202ENST00000470886 ELL2O00472 640 aaPredicted RBP12.86□□□□□ -0.35
RRP1B-202ENST00000470886 ABCC1P33527 1531 aa12.85□□□□□ -0.35
RRP1B-202ENST00000470886 TPM2P07951 284 aa12.85□□□□□ -0.35
RRP1B-202ENST00000470886 RILPL2Q969X0 211 aa12.85□□□□□ -0.35
RRP1B-202ENST00000470886 GNL2Q13823 731 aaKnown RBP12.85□□□□□ -0.35
RRP1B-202ENST00000470886 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
RRP1B-202ENST00000470886 CWC22Q9HCG8 908 aaKnown RBP12.85□□□□□ -0.35
RRP1B-202ENST00000470886 TRAPPC8Q9Y2L5 1435 aa12.85□□□□□ -0.35
RRP1B-202ENST00000470886 ABCC11Q96J66 1382 aa12.84□□□□□ -0.35
RRP1B-202ENST00000470886 EXOSC9Q06265 439 aaKnown RBP12.84□□□□□ -0.35
RRP1B-202ENST00000470886 CCDC173Q0VFZ6 552 aa12.84□□□□□ -0.35
RRP1B-202ENST00000470886 ATF7IPQ6VMQ6 1270 aa12.84□□□□□ -0.35
RRP1B-202ENST00000470886 POLR3AO14802 1390 aaPredicted RBP12.84□□□□□ -0.35
RRP1B-202ENST00000470886 APPP05067 770 aa12.84□□□□□ -0.35
RRP1B-202ENST00000470886 ZKSCAN1P17029 563 aaPredicted RBP12.84□□□□□ -0.35
RRP1B-202ENST00000470886 NASPP49321 788 aaPredicted RBP12.84□□□□□ -0.35
RRP1B-202ENST00000470886 KDM5AP29375 1690 aaKnown RBP12.83□□□□□ -0.35
RRP1B-202ENST00000470886 NSD3Q9BZ95 1437 aa12.83□□□□□ -0.35
RRP1B-202ENST00000470886 TTC37Q6PGP7 1564 aa12.83□□□□□ -0.36
RRP1B-202ENST00000470886 LETM1O95202 739 aaPredicted RBP12.83□□□□□ -0.36
RRP1B-202ENST00000470886 TPM3P06753 285 aa12.83□□□□□ -0.36
RRP1B-202ENST00000470886 CCDC39Q9UFE4 941 aa12.83□□□□□ -0.36
RRP1B-202ENST00000470886 WWC1Q8IX03 1113 aa12.83□□□□□ -0.36
RRP1B-202ENST00000470886 DIAPH3Q9NSV4 1193 aa12.83□□□□□ -0.36
RRP1B-202ENST00000470886 MYOM2P54296 1465 aa12.83□□□□□ -0.36
RRP1B-202ENST00000470886 DUSP27Q5VZP5 1158 aa12.82□□□□□ -0.36
RRP1B-202ENST00000470886 BRPF3Q9ULD4 1205 aa12.82□□□□□ -0.36
RRP1B-202ENST00000470886 PLEKHG5O94827 1062 aa12.82□□□□□ -0.36
RRP1B-202ENST00000470886 HSP90B1P14625 803 aaKnown RBP12.82□□□□□ -0.36
RRP1B-202ENST00000470886 GGNBP2Q9H3C7 697 aa12.82□□□□□ -0.36
RRP1B-202ENST00000470886 CD109Q6YHK3 1445 aa12.82□□□□□ -0.36
RRP1B-202ENST00000470886 MCM4P33991 863 aa12.81□□□□□ -0.36
RRP1B-202ENST00000470886 C14orf93Q9H972 538 aaKnown RBP12.81□□□□□ -0.36
RRP1B-202ENST00000470886 BCORL1Q5H9F3 1711 aa12.81□□□□□ -0.36
RRP1B-202ENST00000470886 MCTP1Q6DN14 999 aa12.81□□□□□ -0.36
RRP1B-202ENST00000470886 NOL8Q76FK4 1167 aaKnown RBP12.81□□□□□ -0.36
RRP1B-202ENST00000470886 GNAI3P08754 354 aa12.81□□□□□ -0.36
RRP1B-202ENST00000470886 RNF20Q5VTR2 975 aa12.81□□□□□ -0.36
RRP1B-202ENST00000470886 SBNO2Q9Y2G9 1366 aa12.8□□□□□ -0.36
RRP1B-202ENST00000470886 TET3O43151 1660 aa12.8□□□□□ -0.36
RRP1B-202ENST00000470886 LRRFIP1Q32MZ4 808 aaKnown RBP12.8□□□□□ -0.36
RRP1B-202ENST00000470886 PPP6R1Q9UPN7 881 aa12.8□□□□□ -0.36
RRP1B-202ENST00000470886 PTPRTO14522 1441 aa12.8□□□□□ -0.36
RRP1B-202ENST00000470886 CABP2Q9NPB3 220 aa12.8□□□□□ -0.36
RRP1B-202ENST00000470886 CHD1O14646 1710 aa12.8□□□□□ -0.36
RRP1B-202ENST00000470886 GOLGA6L19H0YKK7 550 aa12.79□□□□□ -0.36
RRP1B-202ENST00000470886 ERC2O15083 957 aa12.79□□□□□ -0.36
RRP1B-202ENST00000470886 ANO2Q9NQ90 1003 aa12.79□□□□□ -0.36
RRP1B-202ENST00000470886 K7ELQ4 463 aaPredicted RBP12.79□□□□□ -0.36
RRP1B-202ENST00000470886 NOB1Q9ULX3 412 aaKnown RBP12.79□□□□□ -0.36
RRP1B-202ENST00000470886 CCDC27Q2M243 656 aa12.79□□□□□ -0.36
RRP1B-202ENST00000470886 IL27Q8NEV9 243 aa12.78□□□□□ -0.36
RRP1B-202ENST00000470886 NOS1P29475 1434 aa12.78□□□□□ -0.36
RRP1B-202ENST00000470886 CDC42BPBQ9Y5S2 1711 aa12.78□□□□□ -0.36
RRP1B-202ENST00000470886 ZCCHC11Q5TAX3 1644 aaKnown RBP12.78□□□□□ -0.36
RRP1B-202ENST00000470886 H3BQV1 296 aa12.78□□□□□ -0.36
RRP1B-202ENST00000470886 FCHSD2O94868 740 aa12.78□□□□□ -0.36
RRP1B-202ENST00000470886 IFFO2Q5TF58 517 aa12.78□□□□□ -0.36
RRP1B-202ENST00000470886 SLC12A5Q9H2X9 1139 aa12.78□□□□□ -0.36
RRP1B-202ENST00000470886 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.78□□□□□ -0.36
RRP1B-202ENST00000470886 MAGI2Q86UL8 1455 aa12.78□□□□□ -0.36
RRP1B-202ENST00000470886 ANKRD36BQ8N2N9 1353 aa12.78□□□□□ -0.36
RRP1B-202ENST00000470886 CHD1LQ86WJ1 897 aa12.77□□□□□ -0.36
RRP1B-202ENST00000470886 SMC3Q9UQE7 1217 aa12.77□□□□□ -0.36
RRP1B-202ENST00000470886 TWISTNBQ3B726 338 aaPredicted RBP12.77□□□□□ -0.36
RRP1B-202ENST00000470886 ALDH1L2Q3SY69 923 aa12.77□□□□□ -0.36
RRP1B-202ENST00000470886 FOXD4L5Q5VV16 416 aaPredicted RBP12.77□□□□□ -0.36
RRP1B-202ENST00000470886 FAM184AQ8NB25 1140 aa12.77□□□□□ -0.36
RRP1B-202ENST00000470886 FOXD4L4Q8WXT5 416 aaPredicted RBP12.77□□□□□ -0.36
RRP1B-202ENST00000470886 ASXL2Q76L83 1435 aa12.77□□□□□ -0.37
RRP1B-202ENST00000470886 TMEM132EQ6IEE7 984 aa12.77□□□□□ -0.37
RRP1B-202ENST00000470886 GRPEL1Q9HAV7 217 aa12.77□□□□□ -0.37
RRP1B-202ENST00000470886 PRKAR2BP31323 418 aa12.77□□□□□ -0.37
RRP1B-202ENST00000470886 RARSP54136 660 aaKnown RBP12.77□□□□□ -0.37
RRP1B-202ENST00000470886 TEFQ10587 303 aa12.76□□□□□ -0.37
RRP1B-202ENST00000470886 FKBP5Q13451 457 aaPredicted RBP12.76□□□□□ -0.37
RRP1B-202ENST00000470886 GORABQ5T7V8 394 aa12.76□□□□□ -0.37
RRP1B-202ENST00000470886 IL16Q14005 1332 aa12.76□□□□□ -0.37
RRP1B-202ENST00000470886 TSPYL4Q9UJ04 414 aa12.76□□□□□ -0.37
RRP1B-202ENST00000470886 ADGRF5Q8IZF2 1346 aa12.76□□□□□ -0.37
RRP1B-202ENST00000470886 BECN2A8MW95 431 aa12.76□□□□□ -0.37
RRP1B-202ENST00000470886 DDX58O95786 925 aaKnown RBP12.76□□□□□ -0.37
RRP1B-202ENST00000470886 SF3A1Q15459 793 aaKnown RBP12.76□□□□□ -0.37
RRP1B-202ENST00000470886 NEXNQ0ZGT2 675 aa12.75□□□□□ -0.37
RRP1B-202ENST00000470886 IFIT2P09913 472 aaKnown RBP12.75□□□□□ -0.37
RRP1B-202ENST00000470886 PDIA4P13667 645 aaKnown RBP12.75□□□□□ -0.37
RRP1B-202ENST00000470886 ARID3AQ99856 593 aa12.75□□□□□ -0.37
RRP1B-202ENST00000470886 HMGN5P82970 282 aaKnown RBP12.74□□□□□ -0.37
RRP1B-202ENST00000470886 C1orf141Q5JVX7 400 aa12.74□□□□□ -0.37
RRP1B-202ENST00000470886 GAS2L2Q8NHY3 880 aa12.74□□□□□ -0.37
RRP1B-202ENST00000470886 ZMYM3Q14202 1370 aa12.74□□□□□ -0.37
RRP1B-202ENST00000470886 A0A0G2JS52 829 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms