RNA–Protein interactions for RNA: ENST00000469625.2

CHD1L-206, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 423 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-206ENST00000469625 MIER1Q8N108 512 aa8.62□□□□□ -1.03
CHD1L-206ENST00000469625 LRRC59Q96AG4 307 aaKnown RBP8.62□□□□□ -1.03
CHD1L-206ENST00000469625 SIN3AQ96ST3 1273 aa8.62□□□□□ -1.03
CHD1L-206ENST00000469625 KIF1AQ12756 1690 aa8.62□□□□□ -1.03
CHD1L-206ENST00000469625 NPHP3Q7Z494 1330 aa8.61□□□□□ -1.03
CHD1L-206ENST00000469625 ARHGEF28Q8N1W1 1705 aaKnown RBP8.61□□□□□ -1.03
CHD1L-206ENST00000469625 NUTM2FA1L443 756 aa8.61□□□□□ -1.03
CHD1L-206ENST00000469625 DDX17Q92841 729 aaKnown RBP8.61□□□□□ -1.03
CHD1L-206ENST00000469625 L3MBTL2Q969R5 705 aa8.61□□□□□ -1.03
CHD1L-206ENST00000469625 ANKARQ7Z5J8 1434 aa8.61□□□□□ -1.03
CHD1L-206ENST00000469625 PNPLA6Q8IY17 1366 aa8.61□□□□□ -1.03
CHD1L-206ENST00000469625 SOS2Q07890 1332 aaPredicted RBP8.6□□□□□ -1.03
CHD1L-206ENST00000469625 MINK1Q8N4C8 1332 aaPredicted RBP8.6□□□□□ -1.03
CHD1L-206ENST00000469625 MEX3CQ5U5Q3 659 aaKnown RBP8.6□□□□□ -1.03
CHD1L-206ENST00000469625 ILDR2Q71H61 639 aa8.6□□□□□ -1.03
CHD1L-206ENST00000469625 LRP6O75581 1613 aa8.6□□□□□ -1.03
CHD1L-206ENST00000469625 TONSLQ96HA7 1378 aa8.6□□□□□ -1.03
CHD1L-206ENST00000469625 PXDNQ92626 1479 aa8.59□□□□□ -1.03
CHD1L-206ENST00000469625 HIRIP3Q9BW71 556 aaPredicted RBP8.59□□□□□ -1.03
CHD1L-206ENST00000469625 TULP4Q9NRJ4 1543 aa8.59□□□□□ -1.03
CHD1L-206ENST00000469625 NUTM2BA6NNL0 878 aaPredicted RBP8.58□□□□□ -1.04
CHD1L-206ENST00000469625 NUTM2EB1AL46 878 aaPredicted RBP8.58□□□□□ -1.04
CHD1L-206ENST00000469625 FOXO3O43524 673 aa8.58□□□□□ -1.04
CHD1L-206ENST00000469625 NBPF1Q3BBV0 1214 aa8.58□□□□□ -1.04
CHD1L-206ENST00000469625 NUTM2AQ8IVF1 878 aaPredicted RBP8.58□□□□□ -1.04
CHD1L-206ENST00000469625 PHF8Q9UPP1 1060 aa8.58□□□□□ -1.04
CHD1L-206ENST00000469625 ROCK2O75116 1388 aaKnown RBP8.58□□□□□ -1.04
CHD1L-206ENST00000469625 TRPM1Q7Z4N2 1603 aa8.58□□□□□ -1.04
CHD1L-206ENST00000469625 WASLO00401 505 aaPredicted RBP8.57□□□□□ -1.04
CHD1L-206ENST00000469625 XPCQ01831 940 aaPredicted RBP8.57□□□□□ -1.04
CHD1L-206ENST00000469625 ZBTB47Q9UFB7 747 aaPredicted RBP8.57□□□□□ -1.04
CHD1L-206ENST00000469625 USP32Q8NFA0 1604 aa8.57□□□□□ -1.04
CHD1L-206ENST00000469625 COL22A1Q8NFW1 1626 aaPredicted RBP8.57□□□□□ -1.04
CHD1L-206ENST00000469625 CENPJQ9HC77 1338 aaPredicted RBP8.56□□□□□ -1.04
CHD1L-206ENST00000469625 RGS17Q9UGC6 210 aaPredicted RBP8.56□□□□□ -1.04
CHD1L-206ENST00000469625 CIZ1Q9ULV3 898 aaPredicted RBP8.56□□□□□ -1.04
CHD1L-206ENST00000469625 TNS3Q68CZ2 1445 aa8.55□□□□□ -1.04
CHD1L-206ENST00000469625 PRKAR2AP13861 404 aaKnown RBP8.55□□□□□ -1.04
CHD1L-206ENST00000469625 PSME1Q06323 249 aa8.55□□□□□ -1.04
CHD1L-206ENST00000469625 ZNF772Q68DY9 489 aaPredicted RBP8.55□□□□□ -1.04
CHD1L-206ENST00000469625 KRT28Q7Z3Y7 464 aa8.55□□□□□ -1.04
CHD1L-206ENST00000469625 ATP7BP35670 1465 aa8.55□□□□□ -1.04
CHD1L-206ENST00000469625 QRICH2Q9H0J4 1663 aa8.55□□□□□ -1.04
CHD1L-206ENST00000469625 PRR36Q9H6K5 1346 aa8.54□□□□□ -1.04
CHD1L-206ENST00000469625 ITSN1Q15811 1721 aa8.54□□□□□ -1.04
CHD1L-206ENST00000469625 RGPD8O14715 1765 aaPredicted RBP8.54□□□□□ -1.04
CHD1L-206ENST00000469625 RALGAPBQ86X10 1494 aa8.54□□□□□ -1.04
CHD1L-206ENST00000469625 SBNO1A3KN83 1393 aa8.54□□□□□ -1.04
CHD1L-206ENST00000469625 GPRASP1Q5JY77 1395 aa8.54□□□□□ -1.04
CHD1L-206ENST00000469625 PMFBP1Q8TBY8 1022 aa8.54□□□□□ -1.04
CHD1L-206ENST00000469625 PCGF6Q9BYE7 350 aa8.54□□□□□ -1.04
CHD1L-206ENST00000469625 SPATA31A3Q5VYP0 1347 aa8.54□□□□□ -1.04
CHD1L-206ENST00000469625 ARHGEF10O15013 1369 aa8.53□□□□□ -1.04
CHD1L-206ENST00000469625 SOCS7O14512 581 aa8.53□□□□□ -1.04
CHD1L-206ENST00000469625 ADAMTS2O95450 1211 aa8.53□□□□□ -1.04
CHD1L-206ENST00000469625 FXR2P51116 673 aaKnown RBP eCLIP8.53□□□□□ -1.04
CHD1L-206ENST00000469625 POTEAQ6S8J7 498 aa8.53□□□□□ -1.04
CHD1L-206ENST00000469625 PIP4P2Q8N4L2 257 aa8.53□□□□□ -1.04
CHD1L-206ENST00000469625 C8orf37Q96NL8 207 aa8.53□□□□□ -1.04
CHD1L-206ENST00000469625 CDK19Q9BWU1 502 aa8.53□□□□□ -1.04
CHD1L-206ENST00000469625 AFF2P51816 1311 aa8.53□□□□□ -1.04
CHD1L-206ENST00000469625 TOPAZ1Q8N9V7 1692 aa8.53□□□□□ -1.04
CHD1L-206ENST00000469625 SRPK2P78362 688 aaKnown RBP8.52□□□□□ -1.05
CHD1L-206ENST00000469625 NBPF8Q3BBV2 869 aa8.52□□□□□ -1.05
CHD1L-206ENST00000469625 CHADLQ6NUI6 762 aa8.52□□□□□ -1.05
CHD1L-206ENST00000469625 NGDNQ8NEJ9 315 aaKnown RBP8.52□□□□□ -1.05
CHD1L-206ENST00000469625 NUDT16Q96DE0 195 aaKnown RBP8.52□□□□□ -1.05
CHD1L-206ENST00000469625 CLSPNQ9HAW4 1339 aa8.52□□□□□ -1.05
CHD1L-206ENST00000469625 LMOD2Q6P5Q4 547 aa8.51□□□□□ -1.05
CHD1L-206ENST00000469625 NGLY1Q96IV0 654 aa8.51□□□□□ -1.05
CHD1L-206ENST00000469625 CARD11Q9BXL7 1154 aa8.51□□□□□ -1.05
CHD1L-206ENST00000469625 CCDC61Q9Y6R9 512 aa8.51□□□□□ -1.05
CHD1L-206ENST00000469625 TRPM3Q9HCF6 1732 aaPredicted RBP8.51□□□□□ -1.05
CHD1L-206ENST00000469625 EVC2Q86UK5 1308 aa8.51□□□□□ -1.05
CHD1L-206ENST00000469625 PPIP5K1Q6PFW1 1433 aa8.5□□□□□ -1.05
CHD1L-206ENST00000469625 CREBZFQ9NS37 354 aa8.5□□□□□ -1.05
CHD1L-206ENST00000469625 POLR3AO14802 1390 aaPredicted RBP8.49□□□□□ -1.05
CHD1L-206ENST00000469625 SBNO2Q9Y2G9 1366 aa8.49□□□□□ -1.05
CHD1L-206ENST00000469625 PAK3O75914 559 aaPredicted RBP8.49□□□□□ -1.05
CHD1L-206ENST00000469625 CABP2Q9NPB3 220 aa8.49□□□□□ -1.05
CHD1L-206ENST00000469625 ALS2Q96Q42 1657 aa8.49□□□□□ -1.05
CHD1L-206ENST00000469625 ABCA3Q99758 1704 aa8.49□□□□□ -1.05
CHD1L-206ENST00000469625 PLEKHG3A1L390 1219 aa8.48□□□□□ -1.05
CHD1L-206ENST00000469625 RXRBP28702 533 aa8.48□□□□□ -1.05
CHD1L-206ENST00000469625 NKX1-1Q15270 411 aaPredicted RBP8.48□□□□□ -1.05
CHD1L-206ENST00000469625 USP21Q9UK80 565 aa8.48□□□□□ -1.05
CHD1L-206ENST00000469625 MARF1Q9Y4F3 1742 aaKnown RBP8.48□□□□□ -1.05
CHD1L-206ENST00000469625 ACEP12821 1306 aa8.48□□□□□ -1.05
CHD1L-206ENST00000469625 CDK12Q9NYV4 1490 aaPredicted RBP8.47□□□□□ -1.05
CHD1L-206ENST00000469625 GTPBP6O43824 516 aaPredicted RBP8.47□□□□□ -1.05
CHD1L-206ENST00000469625 FNBP4Q8N3X1 1017 aaPredicted RBP8.47□□□□□ -1.05
CHD1L-206ENST00000469625 CCER1Q8TC90 406 aaPredicted RBP8.47□□□□□ -1.05
CHD1L-206ENST00000469625 CABLES1Q8TDN4 633 aa8.47□□□□□ -1.05
CHD1L-206ENST00000469625 ATAD2Q6PL18 1390 aa8.47□□□□□ -1.05
CHD1L-206ENST00000469625 QTRT2Q9H974 415 aaKnown RBP8.46□□□□□ -1.06
CHD1L-206ENST00000469625 TRPC5Q9UL62 973 aaPredicted RBP8.46□□□□□ -1.06
CHD1L-206ENST00000469625 BRD4O60885 1362 aaPredicted RBP8.46□□□□□ -1.06
CHD1L-206ENST00000469625 ATRNO75882 1429 aa8.46□□□□□ -1.06
CHD1L-206ENST00000469625 SLIT2O94813 1529 aa8.45□□□□□ -1.06
CHD1L-206ENST00000469625 RBM6P78332 1123 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms