RNA–Protein interactions for RNA: ENST00000468544.1

NPM3-203, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 5

Gene NPM3, Length 393 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-203ENST00000468544 SBNO1A3KN83 1393 aa14.09□□□□□ -0.15
NPM3-203ENST00000468544 PHLPP1O60346 1717 aa14.08□□□□□ -0.16
NPM3-203ENST00000468544 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.08□□□□□ -0.16
NPM3-203ENST00000468544 COL16A1Q07092 1604 aaPredicted RBP14.08□□□□□ -0.16
NPM3-203ENST00000468544 NUTM2GQ5VZR2 741 aa14.07□□□□□ -0.16
NPM3-203ENST00000468544 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
NPM3-203ENST00000468544 AKAP12Q02952 1782 aa14.06□□□□□ -0.16
NPM3-203ENST00000468544 PER1O15534 1290 aaPredicted RBP14.06□□□□□ -0.16
NPM3-203ENST00000468544 DDX10Q13206 875 aaKnown RBP14.06□□□□□ -0.16
NPM3-203ENST00000468544 LMOD2Q6P5Q4 547 aa14.06□□□□□ -0.16
NPM3-203ENST00000468544 NME9Q86XW9 330 aa14.06□□□□□ -0.16
NPM3-203ENST00000468544 TRPM3Q9HCF6 1732 aaPredicted RBP14.06□□□□□ -0.16
NPM3-203ENST00000468544 TNS3Q68CZ2 1445 aa14.06□□□□□ -0.16
NPM3-203ENST00000468544 EDC4Q6P2E9 1401 aaKnown RBP14.06□□□□□ -0.16
NPM3-203ENST00000468544 PLEKHG5O94827 1062 aa14.05□□□□□ -0.16
NPM3-203ENST00000468544 ABTB2Q8N961 1025 aa14.05□□□□□ -0.16
NPM3-203ENST00000468544 PNPLA6Q8IY17 1366 aa14.05□□□□□ -0.16
NPM3-203ENST00000468544 NSD3Q9BZ95 1437 aa14.05□□□□□ -0.16
NPM3-203ENST00000468544 FYB1O15117 783 aa14.04□□□□□ -0.16
NPM3-203ENST00000468544 CABLES1Q8TDN4 633 aa14.04□□□□□ -0.16
NPM3-203ENST00000468544 TTC21AQ8NDW8 1320 aa14.04□□□□□ -0.16
NPM3-203ENST00000468544 BRD4O60885 1362 aaPredicted RBP14.04□□□□□ -0.16
NPM3-203ENST00000468544 MON2Q7Z3U7 1717 aa14.04□□□□□ -0.16
NPM3-203ENST00000468544 NRKQ7Z2Y5 1582 aa14.02□□□□□ -0.16
NPM3-203ENST00000468544 JCADQ9P266 1359 aa14.02□□□□□ -0.17
NPM3-203ENST00000468544 NLRP6P59044 892 aa14.02□□□□□ -0.17
NPM3-203ENST00000468544 ALS2Q96Q42 1657 aa14.01□□□□□ -0.17
NPM3-203ENST00000468544 ARHGEF10O15013 1369 aa14.01□□□□□ -0.17
NPM3-203ENST00000468544 AMER1Q5JTC6 1135 aaPredicted RBP14.01□□□□□ -0.17
NPM3-203ENST00000468544 GGNBP2Q9H3C7 697 aa14.01□□□□□ -0.17
NPM3-203ENST00000468544 KNSTRNQ9Y448 316 aa14□□□□□ -0.17
NPM3-203ENST00000468544 USP31Q70CQ4 1352 aa13.99□□□□□ -0.17
NPM3-203ENST00000468544 CGNL1Q0VF96 1302 aa13.99□□□□□ -0.17
NPM3-203ENST00000468544 PIK3C2AO00443 1686 aa13.99□□□□□ -0.17
NPM3-203ENST00000468544 NLRP13Q86W25 1043 aa13.99□□□□□ -0.17
NPM3-203ENST00000468544 USP19O94966 1318 aa13.98□□□□□ -0.17
NPM3-203ENST00000468544 NUTM2BA6NNL0 878 aaPredicted RBP13.98□□□□□ -0.17
NPM3-203ENST00000468544 NUTM2EB1AL46 878 aaPredicted RBP13.98□□□□□ -0.17
NPM3-203ENST00000468544 FBLN1P23142 703 aa13.98□□□□□ -0.17
NPM3-203ENST00000468544 NUTM2AQ8IVF1 878 aaPredicted RBP13.98□□□□□ -0.17
NPM3-203ENST00000468544 MED1Q15648 1581 aaPredicted RBP13.97□□□□□ -0.17
NPM3-203ENST00000468544 GCP02774 474 aa13.97□□□□□ -0.17
NPM3-203ENST00000468544 CNGB1Q14028 1251 aaPredicted RBP13.97□□□□□ -0.17
NPM3-203ENST00000468544 SOX12O15370 315 aa13.96□□□□□ -0.17
NPM3-203ENST00000468544 CC2D1BQ5T0F9 858 aaKnown RBP13.96□□□□□ -0.17
NPM3-203ENST00000468544 COG3Q96JB2 828 aa13.96□□□□□ -0.17
NPM3-203ENST00000468544 OVOS2A0A0J9YW53 1432 aa13.96□□□□□ -0.18
NPM3-203ENST00000468544 OVOS2Q6IE36 1432 aa13.96□□□□□ -0.18
NPM3-203ENST00000468544 SPATA31A6Q5VVP1 1343 aa13.95□□□□□ -0.18
NPM3-203ENST00000468544 SHPRHQ149N8 1683 aa13.95□□□□□ -0.18
NPM3-203ENST00000468544 COL22A1Q8NFW1 1626 aaPredicted RBP13.95□□□□□ -0.18
NPM3-203ENST00000468544 ADAMTS2O95450 1211 aa13.95□□□□□ -0.18
NPM3-203ENST00000468544 MARF1Q9Y4F3 1742 aaKnown RBP13.95□□□□□ -0.18
NPM3-203ENST00000468544 LRP6O75581 1613 aa13.94□□□□□ -0.18
NPM3-203ENST00000468544 ZC3H6P61129 1189 aaKnown RBP13.94□□□□□ -0.18
NPM3-203ENST00000468544 TNNT2P45379 298 aaPredicted RBP13.93□□□□□ -0.18
NPM3-203ENST00000468544 HAP1P54257 671 aaPredicted RBP13.93□□□□□ -0.18
NPM3-203ENST00000468544 SLIT3O75094 1523 aa13.92□□□□□ -0.18
NPM3-203ENST00000468544 FAM83GA6ND36 823 aa13.92□□□□□ -0.18
NPM3-203ENST00000468544 NPC1L1Q9UHC9 1359 aa13.92□□□□□ -0.18
NPM3-203ENST00000468544 CRYBG1Q9Y4K1 1723 aa13.92□□□□□ -0.18
NPM3-203ENST00000468544 RRS1Q15050 365 aaKnown RBP13.91□□□□□ -0.18
NPM3-203ENST00000468544 CHRNA2Q15822 529 aa13.91□□□□□ -0.18
NPM3-203ENST00000468544 MORC1Q86VD1 984 aa13.91□□□□□ -0.18
NPM3-203ENST00000468544 ARHGEF25Q86VW2 580 aa13.91□□□□□ -0.18
NPM3-203ENST00000468544 KCNH5Q8NCM2 988 aa13.91□□□□□ -0.18
NPM3-203ENST00000468544 NSD2O96028 1365 aa13.91□□□□□ -0.18
NPM3-203ENST00000468544 KIAA0232Q92628 1395 aa13.91□□□□□ -0.18
NPM3-203ENST00000468544 KIF20BQ96Q89 1820 aa13.9□□□□□ -0.18
NPM3-203ENST00000468544 USP54Q70EL1 1684 aa13.9□□□□□ -0.18
NPM3-203ENST00000468544 NFAT5O94916 1531 aa13.9□□□□□ -0.19
NPM3-203ENST00000468544 C8orf37Q96NL8 207 aa13.89□□□□□ -0.19
NPM3-203ENST00000468544 PRDM11Q9NQV5 511 aa13.89□□□□□ -0.19
NPM3-203ENST00000468544 ABCA3Q99758 1704 aa13.89□□□□□ -0.19
NPM3-203ENST00000468544 PHRF1Q9P1Y6 1649 aaKnown RBP13.89□□□□□ -0.19
NPM3-203ENST00000468544 CPDO75976 1380 aa13.88□□□□□ -0.19
NPM3-203ENST00000468544 ZBTB7CA1YPR0 619 aa13.88□□□□□ -0.19
NPM3-203ENST00000468544 AXIN2Q9Y2T1 843 aa13.88□□□□□ -0.19
NPM3-203ENST00000468544 MAP3K19Q56UN5 1328 aa13.88□□□□□ -0.19
NPM3-203ENST00000468544 MEX3CQ5U5Q3 659 aaKnown RBP13.87□□□□□ -0.19
NPM3-203ENST00000468544 POLKQ9UBT6 870 aa13.87□□□□□ -0.19
NPM3-203ENST00000468544 EMILIN1Q9Y6C2 1016 aa13.87□□□□□ -0.19
NPM3-203ENST00000468544 AATKQ6ZMQ8 1374 aa13.86□□□□□ -0.19
NPM3-203ENST00000468544 NGLY1Q96IV0 654 aa13.86□□□□□ -0.19
NPM3-203ENST00000468544 FNBP4Q8N3X1 1017 aaPredicted RBP13.85□□□□□ -0.19
NPM3-203ENST00000468544 PARD3Q8TEW0 1356 aa13.84□□□□□ -0.19
NPM3-203ENST00000468544 ANKRD26Q9UPS8 1709 aa13.84□□□□□ -0.19
NPM3-203ENST00000468544 PPM1GO15355 546 aaPredicted RBP13.84□□□□□ -0.19
NPM3-203ENST00000468544 IP6K1Q92551 441 aa13.84□□□□□ -0.19
NPM3-203ENST00000468544 PRKRIP1Q9H875 184 aaPredicted RBP13.84□□□□□ -0.19
NPM3-203ENST00000468544 BTG4Q9NY30 223 aa13.84□□□□□ -0.19
NPM3-203ENST00000468544 PPP2R1AP30153 589 aa13.83□□□□□ -0.2
NPM3-203ENST00000468544 HOXC9P31274 260 aa13.83□□□□□ -0.2
NPM3-203ENST00000468544 AMPHP49418 695 aa13.83□□□□□ -0.2
NPM3-203ENST00000468544 MTHFSP49914 203 aa13.83□□□□□ -0.2
NPM3-203ENST00000468544 HSP90AB2PQ58FF8 381 aa13.83□□□□□ -0.2
NPM3-203ENST00000468544 RGS17Q9UGC6 210 aaPredicted RBP13.83□□□□□ -0.2
NPM3-203ENST00000468544 AFF2P51816 1311 aa13.83□□□□□ -0.2
NPM3-203ENST00000468544 CAMTA1Q9Y6Y1 1673 aa13.82□□□□□ -0.2
NPM3-203ENST00000468544 BCL9LQ86UU0 1499 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms