RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 SBNO1A3KN83 1393 aa23.52■■□□□ 1.36
VARS2-204ENST00000467717 PAK3O75914 559 aaPredicted RBP23.51■■□□□ 1.35
VARS2-204ENST00000467717 CARD14Q9BXL6 1004 aa23.51■■□□□ 1.35
VARS2-204ENST00000467717 SSH2Q76I76 1423 aa23.5■■□□□ 1.35
VARS2-204ENST00000467717 TTC21BQ7Z4L5 1316 aa23.5■■□□□ 1.35
VARS2-204ENST00000467717 NHSL1Q5SYE7 1610 aa23.49■■□□□ 1.35
VARS2-204ENST00000467717 SPATA31A3Q5VYP0 1347 aa23.49■■□□□ 1.35
VARS2-204ENST00000467717 EDC4Q6P2E9 1401 aaKnown RBP23.49■■□□□ 1.35
VARS2-204ENST00000467717 MYOM1P52179 1685 aa23.48■■□□□ 1.35
VARS2-204ENST00000467717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.47■■□□□ 1.35
VARS2-204ENST00000467717 TTC21AQ8NDW8 1320 aa23.47■■□□□ 1.35
VARS2-204ENST00000467717 DDX10Q13206 875 aaKnown RBP23.46■■□□□ 1.35
VARS2-204ENST00000467717 LMOD2Q6P5Q4 547 aa23.46■■□□□ 1.35
VARS2-204ENST00000467717 NSD3Q9BZ95 1437 aa23.46■■□□□ 1.35
VARS2-204ENST00000467717 TNS3Q68CZ2 1445 aa23.45■■□□□ 1.34
VARS2-204ENST00000467717 ABTB2Q8N961 1025 aa23.45■■□□□ 1.34
VARS2-204ENST00000467717 KNSTRNQ9Y448 316 aa23.45■■□□□ 1.34
VARS2-204ENST00000467717 ARHGEF10O15013 1369 aa23.44■■□□□ 1.34
VARS2-204ENST00000467717 PER1O15534 1290 aaPredicted RBP23.43■■□□□ 1.34
VARS2-204ENST00000467717 CGNL1Q0VF96 1302 aa23.42■■□□□ 1.34
VARS2-204ENST00000467717 COL16A1Q07092 1604 aaPredicted RBP23.42■■□□□ 1.34
VARS2-204ENST00000467717 NME9Q86XW9 330 aa23.41■■□□□ 1.34
VARS2-204ENST00000467717 PHLPP1O60346 1717 aa23.41■■□□□ 1.34
VARS2-204ENST00000467717 JCADQ9P266 1359 aa23.4■■□□□ 1.34
VARS2-204ENST00000467717 AKAP12Q02952 1782 aa23.4■■□□□ 1.34
VARS2-204ENST00000467717 FYB1O15117 783 aa23.4■■□□□ 1.34
VARS2-204ENST00000467717 NLRP6P59044 892 aa23.39■■□□□ 1.33
VARS2-204ENST00000467717 NLRP13Q86W25 1043 aa23.39■■□□□ 1.33
VARS2-204ENST00000467717 MON2Q7Z3U7 1717 aa23.39■■□□□ 1.33
VARS2-204ENST00000467717 PNPLA6Q8IY17 1366 aa23.39■■□□□ 1.33
VARS2-204ENST00000467717 NUTM2GQ5VZR2 741 aa23.38■■□□□ 1.33
VARS2-204ENST00000467717 TRPM3Q9HCF6 1732 aaPredicted RBP23.37■■□□□ 1.33
VARS2-204ENST00000467717 USP31Q70CQ4 1352 aa23.37■■□□□ 1.33
VARS2-204ENST00000467717 NRKQ7Z2Y5 1582 aa23.36■■□□□ 1.33
VARS2-204ENST00000467717 AMER1Q5JTC6 1135 aaPredicted RBP23.36■■□□□ 1.33
VARS2-204ENST00000467717 GGNBP2Q9H3C7 697 aa23.36■■□□□ 1.33
VARS2-204ENST00000467717 COG3Q96JB2 828 aa23.35■■□□□ 1.33
VARS2-204ENST00000467717 ZRANB1Q9UGI0 708 aa23.35■■□□□ 1.33
VARS2-204ENST00000467717 NSD2O96028 1365 aa23.34■■□□□ 1.33
VARS2-204ENST00000467717 USP19O94966 1318 aa23.33■■□□□ 1.32
VARS2-204ENST00000467717 NPC1L1Q9UHC9 1359 aa23.32■■□□□ 1.32
VARS2-204ENST00000467717 PLEKHG5O94827 1062 aa23.32■■□□□ 1.32
VARS2-204ENST00000467717 CABLES1Q8TDN4 633 aa23.32■■□□□ 1.32
VARS2-204ENST00000467717 SPATA31A6Q5VVP1 1343 aa23.32■■□□□ 1.32
VARS2-204ENST00000467717 OVOS2A0A0J9YW53 1432 aa23.31■■□□□ 1.32
VARS2-204ENST00000467717 OVOS2Q6IE36 1432 aa23.31■■□□□ 1.32
VARS2-204ENST00000467717 ALS2Q96Q42 1657 aa23.31■■□□□ 1.32
VARS2-204ENST00000467717 GCP02774 474 aa23.29■■□□□ 1.32
VARS2-204ENST00000467717 HAP1P54257 671 aaPredicted RBP23.29■■□□□ 1.32
VARS2-204ENST00000467717 CC2D1BQ5T0F9 858 aaKnown RBP23.29■■□□□ 1.32
VARS2-204ENST00000467717 KCNH5Q8NCM2 988 aa23.29■■□□□ 1.32
VARS2-204ENST00000467717 PIK3C2AO00443 1686 aa23.28■■□□□ 1.32
VARS2-204ENST00000467717 MORC1Q86VD1 984 aa23.27■■□□□ 1.32
VARS2-204ENST00000467717 NUTM2BA6NNL0 878 aaPredicted RBP23.26■■□□□ 1.31
VARS2-204ENST00000467717 NUTM2EB1AL46 878 aaPredicted RBP23.26■■□□□ 1.31
VARS2-204ENST00000467717 NUTM2AQ8IVF1 878 aaPredicted RBP23.26■■□□□ 1.31
VARS2-204ENST00000467717 SOX12O15370 315 aa23.25■■□□□ 1.31
VARS2-204ENST00000467717 CNGB1Q14028 1251 aaPredicted RBP23.25■■□□□ 1.31
VARS2-204ENST00000467717 COL22A1Q8NFW1 1626 aaPredicted RBP23.25■■□□□ 1.31
VARS2-204ENST00000467717 SHPRHQ149N8 1683 aa23.24■■□□□ 1.31
VARS2-204ENST00000467717 SLIT3O75094 1523 aa23.23■■□□□ 1.31
VARS2-204ENST00000467717 UPF1Q92900 1129 aaKnown RBP eCLIP23.23■■□□□ 1.31
VARS2-204ENST00000467717 ADAMTS2O95450 1211 aa23.21■■□□□ 1.31
VARS2-204ENST00000467717 ZC3H6P61129 1189 aaKnown RBP23.21■■□□□ 1.31
VARS2-204ENST00000467717 TNNT2P45379 298 aaPredicted RBP23.2■■□□□ 1.3
VARS2-204ENST00000467717 ARHGEF25Q86VW2 580 aa23.19■■□□□ 1.3
VARS2-204ENST00000467717 USP54Q70EL1 1684 aa23.19■■□□□ 1.3
VARS2-204ENST00000467717 CPDO75976 1380 aa23.18■■□□□ 1.3
VARS2-204ENST00000467717 AATKQ6ZMQ8 1374 aa23.18■■□□□ 1.3
VARS2-204ENST00000467717 FBLN1P23142 703 aa23.18■■□□□ 1.3
VARS2-204ENST00000467717 KIF20BQ96Q89 1820 aa23.17■■□□□ 1.3
VARS2-204ENST00000467717 KIAA0232Q92628 1395 aa23.17■■□□□ 1.3
VARS2-204ENST00000467717 RALBP1Q15311 655 aa23.17■■□□□ 1.3
VARS2-204ENST00000467717 PRDM11Q9NQV5 511 aa23.17■■□□□ 1.3
VARS2-204ENST00000467717 LRP6O75581 1613 aa23.17■■□□□ 1.3
VARS2-204ENST00000467717 MEX3CQ5U5Q3 659 aaKnown RBP23.16■■□□□ 1.3
VARS2-204ENST00000467717 PARD3Q8TEW0 1356 aa23.15■■□□□ 1.3
VARS2-204ENST00000467717 NFAT5O94916 1531 aa23.15■■□□□ 1.3
VARS2-204ENST00000467717 RRS1Q15050 365 aaKnown RBP23.15■■□□□ 1.3
VARS2-204ENST00000467717 MAP3K19Q56UN5 1328 aa23.14■■□□□ 1.3
VARS2-204ENST00000467717 ZBTB7CA1YPR0 619 aa23.14■■□□□ 1.29
VARS2-204ENST00000467717 FAM83GA6ND36 823 aa23.14■■□□□ 1.29
VARS2-204ENST00000467717 MARF1Q9Y4F3 1742 aaKnown RBP23.13■■□□□ 1.29
VARS2-204ENST00000467717 PHRF1Q9P1Y6 1649 aaKnown RBP23.13■■□□□ 1.29
VARS2-204ENST00000467717 PRKRIP1Q9H875 184 aaPredicted RBP23.13■■□□□ 1.29
VARS2-204ENST00000467717 POLKQ9UBT6 870 aa23.13■■□□□ 1.29
VARS2-204ENST00000467717 CRYBG1Q9Y4K1 1723 aa23.13■■□□□ 1.29
VARS2-204ENST00000467717 ANP32CO43423 234 aa23.12■■□□□ 1.29
VARS2-204ENST00000467717 CHRNA2Q15822 529 aa23.12■■□□□ 1.29
VARS2-204ENST00000467717 ZNF772Q68DY9 489 aaPredicted RBP23.12■■□□□ 1.29
VARS2-204ENST00000467717 AMPHP49418 695 aa23.11■■□□□ 1.29
VARS2-204ENST00000467717 NGLY1Q96IV0 654 aa23.11■■□□□ 1.29
VARS2-204ENST00000467717 C8orf37Q96NL8 207 aa23.11■■□□□ 1.29
VARS2-204ENST00000467717 EMILIN1Q9Y6C2 1016 aa23.11■■□□□ 1.29
VARS2-204ENST00000467717 PPP2R1AP30153 589 aa23.1■■□□□ 1.29
VARS2-204ENST00000467717 DIEXFQ68CQ4 756 aaKnown RBP23.1■■□□□ 1.29
VARS2-204ENST00000467717 KIF24Q5T7B8 1368 aa23.1■■□□□ 1.29
VARS2-204ENST00000467717 ABCA3Q99758 1704 aa23.09■■□□□ 1.29
VARS2-204ENST00000467717 PPM1GO15355 546 aaPredicted RBP23.09■■□□□ 1.29
VARS2-204ENST00000467717 IP6K1Q92551 441 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms