RNA–Protein interactions for RNA: ENST00000467661.5

NELFA-213, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best)

Gene NELFA, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-213ENST00000467661 NEUROD2Q15784 382 aa22.89■■□□□ 1.26
NELFA-213ENST00000467661 RRP7AQ9Y3A4 280 aaKnown RBP22.88■■□□□ 1.25
NELFA-213ENST00000467661 PNNQ9H307 717 aaKnown RBP22.88■■□□□ 1.25
NELFA-213ENST00000467661 EDC4Q6P2E9 1401 aaKnown RBP22.87■■□□□ 1.25
NELFA-213ENST00000467661 PPIP5K1Q6PFW1 1433 aa22.86■■□□□ 1.25
NELFA-213ENST00000467661 CENPQQ7L2Z9 268 aaPredicted RBP22.86■■□□□ 1.25
NELFA-213ENST00000467661 THEMISQ8N1K5 641 aaPredicted RBP22.86■■□□□ 1.25
NELFA-213ENST00000467661 MYH16Q9H6N6 1097 aa22.86■■□□□ 1.25
NELFA-213ENST00000467661 PNPLA6Q8IY17 1366 aa22.86■■□□□ 1.25
NELFA-213ENST00000467661 CPSF1Q10570 1443 aaKnown RBP22.86■■□□□ 1.25
NELFA-213ENST00000467661 CDC42BPGQ6DT37 1551 aa22.85■■□□□ 1.25
NELFA-213ENST00000467661 U2SURPO15042 1029 aaKnown RBP22.85■■□□□ 1.25
NELFA-213ENST00000467661 AEBP2Q6ZN18 517 aaPredicted RBP22.85■■□□□ 1.25
NELFA-213ENST00000467661 SLIT1O75093 1534 aa22.85■■□□□ 1.25
NELFA-213ENST00000467661 MON2Q7Z3U7 1717 aa22.84■■□□□ 1.25
NELFA-213ENST00000467661 DIAPH1O60610 1272 aaKnown RBP22.84■■□□□ 1.25
NELFA-213ENST00000467661 BCAR3O75815 825 aa22.84■■□□□ 1.25
NELFA-213ENST00000467661 PDE3AQ14432 1141 aa22.84■■□□□ 1.25
NELFA-213ENST00000467661 KDM2BQ8NHM5 1336 aa22.84■■□□□ 1.25
NELFA-213ENST00000467661 MAPK8IP3Q9UPT6 1336 aa22.84■■□□□ 1.25
NELFA-213ENST00000467661 ITSN1Q15811 1721 aa22.84■■□□□ 1.25
NELFA-213ENST00000467661 TXNDC2Q86VQ3 553 aa22.83■■□□□ 1.25
NELFA-213ENST00000467661 PLEKHG1Q9ULL1 1385 aa22.83■■□□□ 1.25
NELFA-213ENST00000467661 ARHGAP23Q9P227 1491 aa22.83■■□□□ 1.24
NELFA-213ENST00000467661 MSH5O43196 834 aa22.82■■□□□ 1.24
NELFA-213ENST00000467661 CANXP27824 592 aaKnown RBP22.82■■□□□ 1.24
NELFA-213ENST00000467661 PLEKHF1Q96S99 279 aa22.82■■□□□ 1.24
NELFA-213ENST00000467661 AKAP12Q02952 1782 aa22.81■■□□□ 1.24
NELFA-213ENST00000467661 HSPA2P54652 639 aa22.8■■□□□ 1.24
NELFA-213ENST00000467661 ERICH6Q7L0X2 663 aa22.8■■□□□ 1.24
NELFA-213ENST00000467661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.8■■□□□ 1.24
NELFA-213ENST00000467661 ADAMTS13Q76LX8 1427 aa22.8■■□□□ 1.24
NELFA-213ENST00000467661 ANP32AP39687 249 aaKnown RBP22.79■■□□□ 1.24
NELFA-213ENST00000467661 NUDT16Q96DE0 195 aaKnown RBP22.79■■□□□ 1.24
NELFA-213ENST00000467661 CCDC61Q9Y6R9 512 aa22.79■■□□□ 1.24
NELFA-213ENST00000467661 STRCQ7RTU9 1775 aa22.78■■□□□ 1.24
NELFA-213ENST00000467661 CT47B1P0C2W7 299 aaPredicted RBP22.78■■□□□ 1.24
NELFA-213ENST00000467661 TMPOP42166 694 aaKnown RBP22.77■■□□□ 1.24
NELFA-213ENST00000467661 RARSP54136 660 aaKnown RBP22.77■■□□□ 1.24
NELFA-213ENST00000467661 MAP2P11137 1827 aaKnown RBP22.77■■□□□ 1.24
NELFA-213ENST00000467661 IL16Q14005 1332 aa22.76■■□□□ 1.23
NELFA-213ENST00000467661 AAMPQ13685 434 aa22.76■■□□□ 1.23
NELFA-213ENST00000467661 LTKP29376 864 aa22.75■■□□□ 1.23
NELFA-213ENST00000467661 ZNF692Q9BU19 519 aaPredicted RBP22.75■■□□□ 1.23
NELFA-213ENST00000467661 EID1Q9Y6B2 187 aa22.75■■□□□ 1.23
NELFA-213ENST00000467661 AATKQ6ZMQ8 1374 aa22.75■■□□□ 1.23
NELFA-213ENST00000467661 FCHSD2O94868 740 aa22.74■■□□□ 1.23
NELFA-213ENST00000467661 NEFMP07197 916 aa22.74■■□□□ 1.23
NELFA-213ENST00000467661 PDE4AP27815 886 aa22.74■■□□□ 1.23
NELFA-213ENST00000467661 POLKQ9UBT6 870 aa22.74■■□□□ 1.23
NELFA-213ENST00000467661 CDK12Q9NYV4 1490 aaPredicted RBP22.74■■□□□ 1.23
NELFA-213ENST00000467661 ROBO2Q9HCK4 1378 aa22.73■■□□□ 1.23
NELFA-213ENST00000467661 TOPAZ1Q8N9V7 1692 aa22.73■■□□□ 1.23
NELFA-213ENST00000467661 LRRC7Q96NW7 1537 aa22.73■■□□□ 1.23
NELFA-213ENST00000467661 BACH2Q9BYV9 841 aa22.73■■□□□ 1.23
NELFA-213ENST00000467661 ANKLE2Q86XL3 938 aa22.72■■□□□ 1.23
NELFA-213ENST00000467661 COG3Q96JB2 828 aa22.71■■□□□ 1.23
NELFA-213ENST00000467661 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.71■■□□□ 1.23
NELFA-213ENST00000467661 FRAT1Q92837 279 aaPredicted RBP22.71■■□□□ 1.23
NELFA-213ENST00000467661 TRIM35Q9UPQ4 493 aa22.71■■□□□ 1.23
NELFA-213ENST00000467661 DIP2AQ14689 1571 aa22.7■■□□□ 1.22
NELFA-213ENST00000467661 RIPK4P57078 832 aa22.69■■□□□ 1.22
NELFA-213ENST00000467661 PPM1GO15355 546 aaPredicted RBP22.68■■□□□ 1.22
NELFA-213ENST00000467661 NME9Q86XW9 330 aa22.68■■□□□ 1.22
NELFA-213ENST00000467661 CLUAP1Q96AJ1 413 aa22.68■■□□□ 1.22
NELFA-213ENST00000467661 NCKAP5LQ9HCH0 1330 aa22.68■■□□□ 1.22
NELFA-213ENST00000467661 NRKQ7Z2Y5 1582 aa22.68■■□□□ 1.22
NELFA-213ENST00000467661 PANK1Q8TE04 598 aa22.67■■□□□ 1.22
NELFA-213ENST00000467661 IPO9Q96P70 1041 aaKnown RBP22.67■■□□□ 1.22
NELFA-213ENST00000467661 RSPH6AQ9H0K4 717 aa22.67■■□□□ 1.22
NELFA-213ENST00000467661 PRR36Q9H6K5 1346 aa22.67■■□□□ 1.22
NELFA-213ENST00000467661 COG6Q9Y2V7 657 aa22.66■■□□□ 1.22
NELFA-213ENST00000467661 NOP58Q9Y2X3 529 aaKnown RBP22.65■■□□□ 1.22
NELFA-213ENST00000467661 PTCH1Q13635 1447 aa22.64■■□□□ 1.22
NELFA-213ENST00000467661 PRKAR2BP31323 418 aa22.64■■□□□ 1.21
NELFA-213ENST00000467661 TBX22Q9Y458 520 aa22.64■■□□□ 1.21
NELFA-213ENST00000467661 EMILIN1Q9Y6C2 1016 aa22.63■■□□□ 1.21
NELFA-213ENST00000467661 NPHP4O75161 1426 aaPredicted RBP22.63■■□□□ 1.21
NELFA-213ENST00000467661 PTPRUQ92729 1446 aa22.63■■□□□ 1.21
NELFA-213ENST00000467661 PLEKHG3A1L390 1219 aa22.62■■□□□ 1.21
NELFA-213ENST00000467661 CALD1Q05682 793 aaKnown RBP22.62■■□□□ 1.21
NELFA-213ENST00000467661 TSR2Q969E8 191 aaKnown RBP22.62■■□□□ 1.21
NELFA-213ENST00000467661 IL13P35225 146 aa22.62■■□□□ 1.21
NELFA-213ENST00000467661 EXOSC9Q06265 439 aaKnown RBP22.62■■□□□ 1.21
NELFA-213ENST00000467661 ZKSCAN2Q63HK3 967 aa22.62■■□□□ 1.21
NELFA-213ENST00000467661 PMFBP1Q8TBY8 1022 aa22.62■■□□□ 1.21
NELFA-213ENST00000467661 NFE2L2Q16236 605 aa22.6■■□□□ 1.21
NELFA-213ENST00000467661 SLC26A8Q96RN1 970 aa22.6■■□□□ 1.21
NELFA-213ENST00000467661 BCL2L13Q9BXK5 485 aa22.6■■□□□ 1.21
NELFA-213ENST00000467661 TTC21BQ7Z4L5 1316 aa22.6■■□□□ 1.21
NELFA-213ENST00000467661 FBLN1P23142 703 aa22.6■■□□□ 1.21
NELFA-213ENST00000467661 ZRANB1Q9UGI0 708 aa22.6■■□□□ 1.21
NELFA-213ENST00000467661 NALCNQ8IZF0 1738 aa22.59■■□□□ 1.21
NELFA-213ENST00000467661 ACEP12821 1306 aa22.59■■□□□ 1.21
NELFA-213ENST00000467661 SMC4Q9NTJ3 1288 aa22.59■■□□□ 1.21
NELFA-213ENST00000467661 USP6P35125 1406 aa22.58■■□□□ 1.21
NELFA-213ENST00000467661 AMOTL2Q9Y2J4 779 aa22.58■■□□□ 1.21
NELFA-213ENST00000467661 SKAP1Q86WV1 359 aa22.57■■□□□ 1.2
NELFA-213ENST00000467661 FTSJ3Q8IY81 847 aaKnown RBP22.57■■□□□ 1.2
NELFA-213ENST00000467661 ZBTB47Q9UFB7 747 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms