RNA–Protein interactions for RNA: ENST00000463822.1

RGPD6-207, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 1 (best)

Gene RGPD6, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-207ENST00000463822 FOXO3O43524 673 aa5.91□□□□□ -1.46
RGPD6-207ENST00000463822 LTV1Q96GA3 475 aaPredicted RBP5.91□□□□□ -1.46
RGPD6-207ENST00000463822 CCDC136Q96JN2 1154 aa5.91□□□□□ -1.46
RGPD6-207ENST00000463822 PRKAR2BP31323 418 aa5.91□□□□□ -1.46
RGPD6-207ENST00000463822 PTCH1Q13635 1447 aa5.91□□□□□ -1.46
RGPD6-207ENST00000463822 CDCA7LQ96GN5 454 aa5.9□□□□□ -1.46
RGPD6-207ENST00000463822 LAS1LQ9Y4W2 734 aaKnown RBP5.9□□□□□ -1.46
RGPD6-207ENST00000463822 ATP7BP35670 1465 aa5.9□□□□□ -1.46
RGPD6-207ENST00000463822 INSRP06213 1382 aa5.9□□□□□ -1.46
RGPD6-207ENST00000463822 SLIT1O75093 1534 aa5.9□□□□□ -1.46
RGPD6-207ENST00000463822 KDM5AP29375 1690 aaKnown RBP5.9□□□□□ -1.46
RGPD6-207ENST00000463822 FCHSD2O94868 740 aa5.9□□□□□ -1.46
RGPD6-207ENST00000463822 HMOX1P09601 288 aa5.9□□□□□ -1.46
RGPD6-207ENST00000463822 ZRANB1Q9UGI0 708 aa5.9□□□□□ -1.46
RGPD6-207ENST00000463822 POLKQ9UBT6 870 aa5.9□□□□□ -1.46
RGPD6-207ENST00000463822 SIGLEC1Q9BZZ2 1709 aa5.9□□□□□ -1.46
RGPD6-207ENST00000463822 RIPK4P57078 832 aa5.9□□□□□ -1.47
RGPD6-207ENST00000463822 SMG6Q86US8 1419 aaKnown RBP5.9□□□□□ -1.47
RGPD6-207ENST00000463822 XPCQ01831 940 aaPredicted RBP5.9□□□□□ -1.47
RGPD6-207ENST00000463822 PPP4R2Q9NY27 417 aa5.9□□□□□ -1.47
RGPD6-207ENST00000463822 IQGAP1P46940 1657 aa5.9□□□□□ -1.47
RGPD6-207ENST00000463822 CEP170BQ9Y4F5 1589 aaPredicted RBP5.89□□□□□ -1.47
RGPD6-207ENST00000463822 KCNH5Q8NCM2 988 aa5.89□□□□□ -1.47
RGPD6-207ENST00000463822 RTF1Q92541 710 aaKnown RBP5.89□□□□□ -1.47
RGPD6-207ENST00000463822 MSH6P52701 1360 aa5.89□□□□□ -1.47
RGPD6-207ENST00000463822 CSB-PGBD3P0DP91 1061 aa5.89□□□□□ -1.47
RGPD6-207ENST00000463822 PTPRUQ92729 1446 aa5.89□□□□□ -1.47
RGPD6-207ENST00000463822 FBLN1P23142 703 aa5.89□□□□□ -1.47
RGPD6-207ENST00000463822 TMEM94Q12767 1356 aa5.89□□□□□ -1.47
RGPD6-207ENST00000463822 PPLO60437 1756 aa5.89□□□□□ -1.47
RGPD6-207ENST00000463822 FRAT1Q92837 279 aaPredicted RBP5.88□□□□□ -1.47
RGPD6-207ENST00000463822 SULT6B1Q6IMI4 303 aa5.88□□□□□ -1.47
RGPD6-207ENST00000463822 ANKARQ7Z5J8 1434 aa5.88□□□□□ -1.47
RGPD6-207ENST00000463822 ORAI2Q96SN7 254 aa5.88□□□□□ -1.47
RGPD6-207ENST00000463822 ADGRL3Q9HAR2 1447 aa5.87□□□□□ -1.47
RGPD6-207ENST00000463822 KRT28Q7Z3Y7 464 aa5.87□□□□□ -1.47
RGPD6-207ENST00000463822 RRP1P56182 461 aaKnown RBP5.87□□□□□ -1.47
RGPD6-207ENST00000463822 WWC1Q8IX03 1113 aa5.87□□□□□ -1.47
RGPD6-207ENST00000463822 WDR63Q8IWG1 891 aa5.87□□□□□ -1.47
RGPD6-207ENST00000463822 NPHP3Q7Z494 1330 aa5.87□□□□□ -1.47
RGPD6-207ENST00000463822 USP6P35125 1406 aa5.87□□□□□ -1.47
RGPD6-207ENST00000463822 RIMS1Q86UR5 1692 aaKnown RBP5.87□□□□□ -1.47
RGPD6-207ENST00000463822 MS4A1P11836 297 aa5.87□□□□□ -1.47
RGPD6-207ENST00000463822 FLT4P35916 1363 aa5.86□□□□□ -1.47
RGPD6-207ENST00000463822 AATKQ6ZMQ8 1374 aa5.86□□□□□ -1.47
RGPD6-207ENST00000463822 TMPOP42166 694 aaKnown RBP5.86□□□□□ -1.47
RGPD6-207ENST00000463822 GNAI1P63096 354 aa5.86□□□□□ -1.47
RGPD6-207ENST00000463822 SLFN5Q08AF3 891 aa5.86□□□□□ -1.47
RGPD6-207ENST00000463822 HSP90AB2PQ58FF8 381 aa5.86□□□□□ -1.47
RGPD6-207ENST00000463822 MED14O60244 1454 aa5.86□□□□□ -1.47
RGPD6-207ENST00000463822 BLMP54132 1417 aaPredicted RBP5.86□□□□□ -1.47
RGPD6-207ENST00000463822 MAP3K19Q56UN5 1328 aa5.86□□□□□ -1.47
RGPD6-207ENST00000463822 CPSF1Q10570 1443 aaKnown RBP5.86□□□□□ -1.47
RGPD6-207ENST00000463822 NFE2L2Q16236 605 aa5.86□□□□□ -1.47
RGPD6-207ENST00000463822 FTSJ3Q8IY81 847 aaKnown RBP5.86□□□□□ -1.47
RGPD6-207ENST00000463822 GAS2L2Q8NHY3 880 aa5.85□□□□□ -1.47
RGPD6-207ENST00000463822 FER1L4A9Z1Z3 1794 aa5.85□□□□□ -1.47
RGPD6-207ENST00000463822 NLRP2Q9NX02 1062 aa5.85□□□□□ -1.47
RGPD6-207ENST00000463822 CPS1P31327 1500 aa5.85□□□□□ -1.47
RGPD6-207ENST00000463822 DIP2AQ14689 1571 aa5.85□□□□□ -1.47
RGPD6-207ENST00000463822 EIF4A2Q14240 407 aaKnown RBP5.85□□□□□ -1.47
RGPD6-207ENST00000463822 SMC4Q9NTJ3 1288 aa5.85□□□□□ -1.47
RGPD6-207ENST00000463822 ZC3H6P61129 1189 aaKnown RBP5.85□□□□□ -1.47
RGPD6-207ENST00000463822 B4GALNT3Q6L9W6 998 aa5.85□□□□□ -1.47
RGPD6-207ENST00000463822 QRICH2Q9H0J4 1663 aa5.85□□□□□ -1.47
RGPD6-207ENST00000463822 KDM4FA0A1W2PPD8 638 aa5.84□□□□□ -1.47
RGPD6-207ENST00000463822 IPO8O15397 1037 aaKnown RBP5.84□□□□□ -1.47
RGPD6-207ENST00000463822 CCDC27Q2M243 656 aa5.84□□□□□ -1.47
RGPD6-207ENST00000463822 MYO3AQ8NEV4 1616 aa5.84□□□□□ -1.47
RGPD6-207ENST00000463822 SBNO1A3KN83 1393 aa5.84□□□□□ -1.47
RGPD6-207ENST00000463822 IL13P35225 146 aa5.84□□□□□ -1.47
RGPD6-207ENST00000463822 PLIN1O60240 522 aa5.84□□□□□ -1.47
RGPD6-207ENST00000463822 ZNF335Q9H4Z2 1342 aaPredicted RBP5.84□□□□□ -1.47
RGPD6-207ENST00000463822 DUSP27Q5VZP5 1158 aa5.84□□□□□ -1.47
RGPD6-207ENST00000463822 RAPGEF4Q8WZA2 1011 aa5.84□□□□□ -1.47
RGPD6-207ENST00000463822 PRDM11Q9NQV5 511 aa5.84□□□□□ -1.47
RGPD6-207ENST00000463822 TSR2Q969E8 191 aaKnown RBP5.84□□□□□ -1.48
RGPD6-207ENST00000463822 GCP02774 474 aa5.83□□□□□ -1.48
RGPD6-207ENST00000463822 EXOSC9Q06265 439 aaKnown RBP5.83□□□□□ -1.48
RGPD6-207ENST00000463822 AEBP2Q6ZN18 517 aaPredicted RBP5.83□□□□□ -1.48
RGPD6-207ENST00000463822 BCL2L13Q9BXK5 485 aa5.83□□□□□ -1.48
RGPD6-207ENST00000463822 IFT172Q9UG01 1749 aa5.83□□□□□ -1.48
RGPD6-207ENST00000463822 ELL2O00472 640 aaPredicted RBP5.83□□□□□ -1.48
RGPD6-207ENST00000463822 NCBP3Q53F19 620 aaKnown RBP5.83□□□□□ -1.48
RGPD6-207ENST00000463822 AEBP1Q8IUX7 1158 aa5.83□□□□□ -1.48
RGPD6-207ENST00000463822 UBR1Q8IWV7 1749 aa5.83□□□□□ -1.48
RGPD6-207ENST00000463822 CT47B1P0C2W7 299 aaPredicted RBP5.83□□□□□ -1.48
RGPD6-207ENST00000463822 HOXC9P31274 260 aa5.83□□□□□ -1.48
RGPD6-207ENST00000463822 C1orf141Q5JVX7 400 aa5.83□□□□□ -1.48
RGPD6-207ENST00000463822 EXOC6Q8TAG9 804 aa5.83□□□□□ -1.48
RGPD6-207ENST00000463822 C3P01024 1663 aa5.83□□□□□ -1.48
RGPD6-207ENST00000463822 CHMP4BQ9H444 224 aaKnown RBP5.83□□□□□ -1.48
RGPD6-207ENST00000463822 SLAIN2Q9P270 581 aa5.83□□□□□ -1.48
RGPD6-207ENST00000463822 USP31Q70CQ4 1352 aa5.83□□□□□ -1.48
RGPD6-207ENST00000463822 TEFQ10587 303 aa5.82□□□□□ -1.48
RGPD6-207ENST00000463822 PLEKHO1Q53GL0 409 aaPredicted RBP5.82□□□□□ -1.48
RGPD6-207ENST00000463822 ZKSCAN2Q63HK3 967 aa5.82□□□□□ -1.48
RGPD6-207ENST00000463822 CLUAP1Q96AJ1 413 aa5.82□□□□□ -1.48
RGPD6-207ENST00000463822 CHMP4AQ9BY43 222 aa5.82□□□□□ -1.48
RGPD6-207ENST00000463822 RSPH6AQ9H0K4 717 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms