RNA–Protein interactions for RNA: ENST00000463509.1

RBFOX2-211, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 2

Gene RBFOX2, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-211ENST00000463509 SLC52A1Q9NWF4 448 aa11.28□□□□□ -0.6
RBFOX2-211ENST00000463509 A2ML1A8K2U0 1454 aa11.28□□□□□ -0.6
RBFOX2-211ENST00000463509 RIMS1Q86UR5 1692 aaKnown RBP11.28□□□□□ -0.6
RBFOX2-211ENST00000463509 POGKQ9P215 609 aa11.27□□□□□ -0.6
RBFOX2-211ENST00000463509 PCDHB15Q9Y5E8 787 aa11.27□□□□□ -0.6
RBFOX2-211ENST00000463509 SETD1AO15047 1707 aaKnown RBP11.27□□□□□ -0.6
RBFOX2-211ENST00000463509 MAPK8IP3Q9UPT6 1336 aa11.27□□□□□ -0.6
RBFOX2-211ENST00000463509 PMFBP1Q8TBY8 1022 aa11.27□□□□□ -0.61
RBFOX2-211ENST00000463509 TSR2Q969E8 191 aaKnown RBP11.27□□□□□ -0.61
RBFOX2-211ENST00000463509 PRAM1Q96QH2 718 aa11.27□□□□□ -0.61
RBFOX2-211ENST00000463509 ABCC11Q96J66 1382 aa11.27□□□□□ -0.61
RBFOX2-211ENST00000463509 NFKBIBQ15653 356 aa11.26□□□□□ -0.61
RBFOX2-211ENST00000463509 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
RBFOX2-211ENST00000463509 NRXN3Q9Y4C0 1643 aa11.25□□□□□ -0.61
RBFOX2-211ENST00000463509 SEC24BO95487 1268 aa11.25□□□□□ -0.61
RBFOX2-211ENST00000463509 ADGRB2O60241 1585 aa11.25□□□□□ -0.61
RBFOX2-211ENST00000463509 ZFYVE9O95405 1425 aa11.25□□□□□ -0.61
RBFOX2-211ENST00000463509 TERF2IPQ9NYB0 399 aa11.25□□□□□ -0.61
RBFOX2-211ENST00000463509 TNRQ92752 1358 aa11.25□□□□□ -0.61
RBFOX2-211ENST00000463509 PTPRMP28827 1452 aa11.24□□□□□ -0.61
RBFOX2-211ENST00000463509 FYB1O15117 783 aa11.24□□□□□ -0.61
RBFOX2-211ENST00000463509 TMPOP42166 694 aaKnown RBP11.24□□□□□ -0.61
RBFOX2-211ENST00000463509 FTSJ3Q8IY81 847 aaKnown RBP11.24□□□□□ -0.61
RBFOX2-211ENST00000463509 EXOSC9Q06265 439 aaKnown RBP11.24□□□□□ -0.61
RBFOX2-211ENST00000463509 ZKSCAN2Q63HK3 967 aa11.24□□□□□ -0.61
RBFOX2-211ENST00000463509 PDZRN3Q9UPQ7 1066 aa11.24□□□□□ -0.61
RBFOX2-211ENST00000463509 ATAD2Q6PL18 1390 aa11.24□□□□□ -0.61
RBFOX2-211ENST00000463509 YTHDC2Q9H6S0 1430 aaKnown RBP11.24□□□□□ -0.61
RBFOX2-211ENST00000463509 ALKQ9UM73 1620 aa11.23□□□□□ -0.61
RBFOX2-211ENST00000463509 AAMPQ13685 434 aa11.23□□□□□ -0.61
RBFOX2-211ENST00000463509 MVPQ14764 893 aaKnown RBP11.23□□□□□ -0.61
RBFOX2-211ENST00000463509 PLEKHF1Q96S99 279 aa11.23□□□□□ -0.61
RBFOX2-211ENST00000463509 SMC4Q9NTJ3 1288 aa11.23□□□□□ -0.61
RBFOX2-211ENST00000463509 USP19O94966 1318 aa11.23□□□□□ -0.61
RBFOX2-211ENST00000463509 DZIP1LQ8IYY4 767 aaKnown RBP11.23□□□□□ -0.61
RBFOX2-211ENST00000463509 RWDD1Q9H446 243 aaPredicted RBP11.23□□□□□ -0.61
RBFOX2-211ENST00000463509 RIMS2Q9UQ26 1411 aa11.23□□□□□ -0.61
RBFOX2-211ENST00000463509 ANKRD26Q9UPS8 1709 aa11.22□□□□□ -0.61
RBFOX2-211ENST00000463509 NCBP3Q53F19 620 aaKnown RBP11.22□□□□□ -0.61
RBFOX2-211ENST00000463509 HDGFL2Q7Z4V5 671 aaPredicted RBP11.22□□□□□ -0.61
RBFOX2-211ENST00000463509 CDK19Q9BWU1 502 aa11.22□□□□□ -0.61
RBFOX2-211ENST00000463509 TRIM35Q9UPQ4 493 aa11.22□□□□□ -0.61
RBFOX2-211ENST00000463509 COL3A1P02461 1466 aaPredicted RBP11.22□□□□□ -0.61
RBFOX2-211ENST00000463509 CD163L1Q9NR16 1453 aa11.21□□□□□ -0.61
RBFOX2-211ENST00000463509 RIPK4P57078 832 aa11.21□□□□□ -0.62
RBFOX2-211ENST00000463509 CABP1Q9NZU7 370 aa11.21□□□□□ -0.62
RBFOX2-211ENST00000463509 DIAPH1O60610 1272 aaKnown RBP11.2□□□□□ -0.62
RBFOX2-211ENST00000463509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.2□□□□□ -0.62
RBFOX2-211ENST00000463509 SSH1Q8WYL5 1049 aa11.2□□□□□ -0.62
RBFOX2-211ENST00000463509 CT47B1P0C2W7 299 aaPredicted RBP11.19□□□□□ -0.62
RBFOX2-211ENST00000463509 FBLN1P23142 703 aa11.19□□□□□ -0.62
RBFOX2-211ENST00000463509 ITPRIPQ8IWB1 547 aa11.19□□□□□ -0.62
RBFOX2-211ENST00000463509 ADAMTSL3P82987 1691 aa11.19□□□□□ -0.62
RBFOX2-211ENST00000463509 NLRP1Q9C000 1473 aa11.19□□□□□ -0.62
RBFOX2-211ENST00000463509 KIF20BQ96Q89 1820 aa11.19□□□□□ -0.62
RBFOX2-211ENST00000463509 FRAT2O75474 233 aaPredicted RBP11.19□□□□□ -0.62
RBFOX2-211ENST00000463509 TRIM27P14373 513 aa11.19□□□□□ -0.62
RBFOX2-211ENST00000463509 GSE1Q14687 1217 aa11.18□□□□□ -0.62
RBFOX2-211ENST00000463509 WAPLQ7Z5K2 1190 aa11.18□□□□□ -0.62
RBFOX2-211ENST00000463509 NOB1Q9ULX3 412 aaKnown RBP11.18□□□□□ -0.62
RBFOX2-211ENST00000463509 MED14O60244 1454 aa11.18□□□□□ -0.62
RBFOX2-211ENST00000463509 UPF2Q9HAU5 1272 aaKnown RBP11.18□□□□□ -0.62
RBFOX2-211ENST00000463509 BECN1Q14457 450 aa11.17□□□□□ -0.62
RBFOX2-211ENST00000463509 ATF7IPQ6VMQ6 1270 aa11.17□□□□□ -0.62
RBFOX2-211ENST00000463509 IL27Q8NEV9 243 aa11.16□□□□□ -0.62
RBFOX2-211ENST00000463509 SLKQ9H2G2 1235 aaPredicted RBP11.16□□□□□ -0.62
RBFOX2-211ENST00000463509 PNNQ9H307 717 aaKnown RBP11.16□□□□□ -0.62
RBFOX2-211ENST00000463509 DDX19BQ9UMR2 479 aa11.16□□□□□ -0.62
RBFOX2-211ENST00000463509 IL16Q14005 1332 aa11.16□□□□□ -0.62
RBFOX2-211ENST00000463509 PRKAR2BP31323 418 aa11.16□□□□□ -0.62
RBFOX2-211ENST00000463509 TMEM57Q8N5G2 664 aa11.16□□□□□ -0.62
RBFOX2-211ENST00000463509 TMEM2Q9UHN6 1383 aa11.15□□□□□ -0.62
RBFOX2-211ENST00000463509 MAP2P11137 1827 aaKnown RBP11.15□□□□□ -0.62
RBFOX2-211ENST00000463509 PNPLA6Q8IY17 1366 aa11.15□□□□□ -0.63
RBFOX2-211ENST00000463509 HMOX1P09601 288 aa11.14□□□□□ -0.63
RBFOX2-211ENST00000463509 TBC1D32Q96NH3 1257 aa11.14□□□□□ -0.63
RBFOX2-211ENST00000463509 LRRC7Q96NW7 1537 aa11.14□□□□□ -0.63
RBFOX2-211ENST00000463509 CEP170BQ9Y4F5 1589 aaPredicted RBP11.14□□□□□ -0.63
RBFOX2-211ENST00000463509 METP08581 1390 aa11.14□□□□□ -0.63
RBFOX2-211ENST00000463509 FCHSD2O94868 740 aa11.14□□□□□ -0.63
RBFOX2-211ENST00000463509 LTKP29376 864 aa11.14□□□□□ -0.63
RBFOX2-211ENST00000463509 POLKQ9UBT6 870 aa11.14□□□□□ -0.63
RBFOX2-211ENST00000463509 KIF16BQ96L93 1317 aa11.13□□□□□ -0.63
RBFOX2-211ENST00000463509 IPO8O15397 1037 aaKnown RBP11.13□□□□□ -0.63
RBFOX2-211ENST00000463509 HDAC1Q13547 482 aaPredicted RBP11.13□□□□□ -0.63
RBFOX2-211ENST00000463509 THUMPD2Q9BTF0 503 aaKnown RBP11.13□□□□□ -0.63
RBFOX2-211ENST00000463509 RSPH6AQ9H0K4 717 aa11.13□□□□□ -0.63
RBFOX2-211ENST00000463509 PHACTR3Q96KR7 559 aa11.12□□□□□ -0.63
RBFOX2-211ENST00000463509 RTN4Q9NQC3 1192 aaKnown RBP11.12□□□□□ -0.63
RBFOX2-211ENST00000463509 KNDC1Q76NI1 1749 aa11.12□□□□□ -0.63
RBFOX2-211ENST00000463509 MFAP1P55081 439 aaKnown RBP11.12□□□□□ -0.63
RBFOX2-211ENST00000463509 EMILIN1Q9Y6C2 1016 aa11.12□□□□□ -0.63
RBFOX2-211ENST00000463509 FAM135BQ49AJ0 1406 aa11.11□□□□□ -0.63
RBFOX2-211ENST00000463509 NME9Q86XW9 330 aa11.11□□□□□ -0.63
RBFOX2-211ENST00000463509 ZBTB40Q9NUA8 1239 aa11.11□□□□□ -0.63
RBFOX2-211ENST00000463509 ZRANB1Q9UGI0 708 aa11.11□□□□□ -0.63
RBFOX2-211ENST00000463509 ZNF142P52746 1687 aaPredicted RBP11.11□□□□□ -0.63
RBFOX2-211ENST00000463509 ADAMTS13Q76LX8 1427 aa11.11□□□□□ -0.63
RBFOX2-211ENST00000463509 ATP7BP35670 1465 aa11.11□□□□□ -0.63
RBFOX2-211ENST00000463509 TBC1D2Q9BYX2 928 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms