RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 NGEFQ8N5V2 710 aa12.83□□□□□ -0.36
EPB41-208ENST00000460378 PARP3Q9Y6F1 533 aa12.82□□□□□ -0.36
EPB41-208ENST00000460378 MBD5Q9P267 1494 aa12.82□□□□□ -0.36
EPB41-208ENST00000460378 KIF6Q6ZMV9 814 aa12.82□□□□□ -0.36
EPB41-208ENST00000460378 FRAT2O75474 233 aaPredicted RBP12.82□□□□□ -0.36
EPB41-208ENST00000460378 SIRT1Q96EB6 747 aa12.82□□□□□ -0.36
EPB41-208ENST00000460378 ARHGAP31Q2M1Z3 1444 aa12.81□□□□□ -0.36
EPB41-208ENST00000460378 HSPA5P11021 654 aaKnown RBP12.81□□□□□ -0.36
EPB41-208ENST00000460378 GAS2L2Q8NHY3 880 aa12.81□□□□□ -0.36
EPB41-208ENST00000460378 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.81□□□□□ -0.36
EPB41-208ENST00000460378 ZNF652Q9Y2D9 606 aa12.81□□□□□ -0.36
EPB41-208ENST00000460378 ADGBQ8N7X0 1667 aa12.81□□□□□ -0.36
EPB41-208ENST00000460378 CFAP65Q6ZU64 1925 aaKnown RBP12.81□□□□□ -0.36
EPB41-208ENST00000460378 NBPF1Q3BBV0 1214 aa12.8□□□□□ -0.36
EPB41-208ENST00000460378 NAIPQ13075 1403 aa12.8□□□□□ -0.36
EPB41-208ENST00000460378 ABCC3O15438 1527 aa12.8□□□□□ -0.36
EPB41-208ENST00000460378 SLC12A5Q9H2X9 1139 aa12.8□□□□□ -0.36
EPB41-208ENST00000460378 PSDA5PKW4 1024 aaPredicted RBP12.79□□□□□ -0.36
EPB41-208ENST00000460378 MYH16Q9H6N6 1097 aa12.79□□□□□ -0.36
EPB41-208ENST00000460378 CCNL1Q9UK58 526 aaPredicted RBP12.79□□□□□ -0.36
EPB41-208ENST00000460378 HDAC5Q9UQL6 1122 aa12.79□□□□□ -0.36
EPB41-208ENST00000460378 YTHDC2Q9H6S0 1430 aaKnown RBP12.79□□□□□ -0.36
EPB41-208ENST00000460378 BEGAINQ9BUH8 593 aa12.79□□□□□ -0.36
EPB41-208ENST00000460378 CHMP3Q9Y3E7 222 aa12.79□□□□□ -0.36
EPB41-208ENST00000460378 USP47Q96K76 1375 aa12.79□□□□□ -0.36
EPB41-208ENST00000460378 FBXW7Q969H0 707 aa12.79□□□□□ -0.36
EPB41-208ENST00000460378 AMOTQ4VCS5 1084 aa12.78□□□□□ -0.36
EPB41-208ENST00000460378 KCNJ4P48050 445 aa12.78□□□□□ -0.36
EPB41-208ENST00000460378 PANK3Q9H999 370 aa12.78□□□□□ -0.36
EPB41-208ENST00000460378 CLTCQ00610 1675 aaKnown RBP12.78□□□□□ -0.36
EPB41-208ENST00000460378 A0A087WZG4 1122 aa12.78□□□□□ -0.36
EPB41-208ENST00000460378 WDHD1O75717 1129 aaPredicted RBP12.78□□□□□ -0.36
EPB41-208ENST00000460378 MRS2Q9HD23 443 aa12.78□□□□□ -0.36
EPB41-208ENST00000460378 BICDL1Q6ZP65 573 aa12.77□□□□□ -0.36
EPB41-208ENST00000460378 CFAP44Q96MT7 982 aa12.77□□□□□ -0.36
EPB41-208ENST00000460378 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.36
EPB41-208ENST00000460378 IFNL2Q8IZJ0 200 aa12.77□□□□□ -0.37
EPB41-208ENST00000460378 TCOF1Q13428 1488 aaKnown RBP12.77□□□□□ -0.37
EPB41-208ENST00000460378 FAM9BQ8IZU0 186 aa12.76□□□□□ -0.37
EPB41-208ENST00000460378 GTF3C3Q9Y5Q9 886 aa12.76□□□□□ -0.37
EPB41-208ENST00000460378 MAST1Q9Y2H9 1570 aa12.76□□□□□ -0.37
EPB41-208ENST00000460378 KIF13AQ9H1H9 1805 aa12.76□□□□□ -0.37
EPB41-208ENST00000460378 FAM177BA6PVY3 158 aa12.76□□□□□ -0.37
EPB41-208ENST00000460378 RTCBQ9Y3I0 505 aaKnown RBP12.76□□□□□ -0.37
EPB41-208ENST00000460378 NEXNQ0ZGT2 675 aa12.76□□□□□ -0.37
EPB41-208ENST00000460378 ABCC11Q96J66 1382 aa12.76□□□□□ -0.37
EPB41-208ENST00000460378 TTC21BQ7Z4L5 1316 aa12.75□□□□□ -0.37
EPB41-208ENST00000460378 THRAP3Q9Y2W1 955 aaKnown RBP12.75□□□□□ -0.37
EPB41-208ENST00000460378 OS9Q13438 667 aaPredicted RBP12.75□□□□□ -0.37
EPB41-208ENST00000460378 R3HDM1Q15032 1099 aaKnown RBP12.75□□□□□ -0.37
EPB41-208ENST00000460378 BCORL1Q5H9F3 1711 aa12.74□□□□□ -0.37
EPB41-208ENST00000460378 NME9Q86XW9 330 aa12.74□□□□□ -0.37
EPB41-208ENST00000460378 FAM135BQ49AJ0 1406 aa12.74□□□□□ -0.37
EPB41-208ENST00000460378 DDX58O95786 925 aaKnown RBP12.74□□□□□ -0.37
EPB41-208ENST00000460378 EN1Q05925 392 aaPredicted RBP12.74□□□□□ -0.37
EPB41-208ENST00000460378 ZNF622Q969S3 477 aaKnown RBP eCLIP12.74□□□□□ -0.37
EPB41-208ENST00000460378 PTCD1O75127 700 aaKnown RBP12.74□□□□□ -0.37
EPB41-208ENST00000460378 ATP6V1AP38606 617 aa12.74□□□□□ -0.37
EPB41-208ENST00000460378 CCDC87Q9NVE4 849 aa12.74□□□□□ -0.37
EPB41-208ENST00000460378 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
EPB41-208ENST00000460378 PPIP5K1Q6PFW1 1433 aa12.74□□□□□ -0.37
EPB41-208ENST00000460378 RRS1Q15050 365 aaKnown RBP12.74□□□□□ -0.37
EPB41-208ENST00000460378 NCOA3Q9Y6Q9 1424 aa12.74□□□□□ -0.37
EPB41-208ENST00000460378 ADGRL3Q9HAR2 1447 aa12.73□□□□□ -0.37
EPB41-208ENST00000460378 VPS72Q15906 364 aa12.73□□□□□ -0.37
EPB41-208ENST00000460378 TEX13AQ9BXU3 409 aaPredicted RBP12.73□□□□□ -0.37
EPB41-208ENST00000460378 SPATA31A3Q5VYP0 1347 aa12.73□□□□□ -0.37
EPB41-208ENST00000460378 EIF2S2P20042 333 aaKnown RBP12.73□□□□□ -0.37
EPB41-208ENST00000460378 CWC22Q9HCG8 908 aaKnown RBP12.72□□□□□ -0.37
EPB41-208ENST00000460378 ST5P78524 1137 aa12.71□□□□□ -0.37
EPB41-208ENST00000460378 TRAPPC3LQ5T215 181 aa12.71□□□□□ -0.37
EPB41-208ENST00000460378 PNISRQ8TF01 805 aaKnown RBP12.71□□□□□ -0.37
EPB41-208ENST00000460378 ADGRL2O95490 1459 aa12.71□□□□□ -0.38
EPB41-208ENST00000460378 METP08581 1390 aa12.71□□□□□ -0.38
EPB41-208ENST00000460378 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.71□□□□□ -0.38
EPB41-208ENST00000460378 DAXXQ9UER7 740 aaPredicted RBP12.71□□□□□ -0.38
EPB41-208ENST00000460378 DNMT1P26358 1616 aaKnown RBP12.7□□□□□ -0.38
EPB41-208ENST00000460378 RRP7AQ9Y3A4 280 aaKnown RBP12.7□□□□□ -0.38
EPB41-208ENST00000460378 HMOX1P09601 288 aa12.7□□□□□ -0.38
EPB41-208ENST00000460378 ZNF219Q9P2Y4 722 aaPredicted RBP12.7□□□□□ -0.38
EPB41-208ENST00000460378 NKTRP30414 1462 aaKnown RBP12.7□□□□□ -0.38
EPB41-208ENST00000460378 SULT6B1Q6IMI4 303 aa12.7□□□□□ -0.38
EPB41-208ENST00000460378 GRIN3BO60391 1043 aa12.69□□□□□ -0.38
EPB41-208ENST00000460378 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
EPB41-208ENST00000460378 USHBP1Q8N6Y0 703 aa12.69□□□□□ -0.38
EPB41-208ENST00000460378 NINLQ9Y2I6 1382 aa12.69□□□□□ -0.38
EPB41-208ENST00000460378 GORABQ5T7V8 394 aa12.69□□□□□ -0.38
EPB41-208ENST00000460378 FAM182BQ5T319 152 aa12.68□□□□□ -0.38
EPB41-208ENST00000460378 WWC3Q9ULE0 1092 aa12.68□□□□□ -0.38
EPB41-208ENST00000460378 ABCA6Q8N139 1617 aa12.68□□□□□ -0.38
EPB41-208ENST00000460378 PCDH11XQ9BZA7 1347 aa12.68□□□□□ -0.38
EPB41-208ENST00000460378 PCDH11YQ9BZA8 1340 aa12.68□□□□□ -0.38
EPB41-208ENST00000460378 RPGRQ92834 1020 aaKnown RBP12.67□□□□□ -0.38
EPB41-208ENST00000460378 PIK3C2GO75747 1445 aa12.67□□□□□ -0.38
EPB41-208ENST00000460378 PREX1Q8TCU6 1659 aa12.67□□□□□ -0.38
EPB41-208ENST00000460378 LMOD1P29536 600 aaPredicted RBP12.67□□□□□ -0.38
EPB41-208ENST00000460378 LARP1Q6PKG0 1096 aaKnown RBP12.67□□□□□ -0.38
EPB41-208ENST00000460378 VPS37DQ86XT2 251 aa12.67□□□□□ -0.38
EPB41-208ENST00000460378 GNPATO15228 680 aa12.67□□□□□ -0.38
EPB41-208ENST00000460378 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 781.5 ms