RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 ADGRF5Q8IZF2 1346 aa15.19■□□□□ 0.02
SYNE2-207ENST00000458046 ZNF521Q96K83 1311 aa15.19■□□□□ 0.02
SYNE2-207ENST00000458046 SPINK5Q9NQ38 1064 aaPredicted RBP15.19■□□□□ 0.02
SYNE2-207ENST00000458046 RTEL1-TNFRSF6BF6WH68 1400 aa15.18■□□□□ 0.02
SYNE2-207ENST00000458046 ATF5Q9Y2D1 282 aaPredicted RBP15.18■□□□□ 0.02
SYNE2-207ENST00000458046 RICTORQ6R327 1708 aa15.18■□□□□ 0.02
SYNE2-207ENST00000458046 SLFN5Q08AF3 891 aa15.18■□□□□ 0.02
SYNE2-207ENST00000458046 NKX1-1Q15270 411 aaPredicted RBP15.18■□□□□ 0.02
SYNE2-207ENST00000458046 CFAP74Q9C0B2 1584 aa15.18■□□□□ 0.02
SYNE2-207ENST00000458046 SCAPERQ9BY12 1400 aa15.17■□□□□ 0.02
SYNE2-207ENST00000458046 CLTCL1P53675 1640 aa15.17■□□□□ 0.02
SYNE2-207ENST00000458046 BRD1O95696 1058 aa15.17■□□□□ 0.02
SYNE2-207ENST00000458046 ANAPC15P60006 121 aa15.17■□□□□ 0.02
SYNE2-207ENST00000458046 ASXL1Q8IXJ9 1541 aa15.17■□□□□ 0.02
SYNE2-207ENST00000458046 FBXW7Q969H0 707 aa15.17■□□□□ 0.02
SYNE2-207ENST00000458046 IQGAP1P46940 1657 aa15.17■□□□□ 0.02
SYNE2-207ENST00000458046 LOC102724159A0A0B4J2E5 919 aa15.16■□□□□ 0.02
SYNE2-207ENST00000458046 PWP2Q15269 919 aaKnown RBP15.16■□□□□ 0.02
SYNE2-207ENST00000458046 CARD14Q9BXL6 1004 aa15.16■□□□□ 0.02
SYNE2-207ENST00000458046 EIF3AQ14152 1382 aaKnown RBP15.16■□□□□ 0.02
SYNE2-207ENST00000458046 ZFYVE16Q7Z3T8 1539 aa15.16■□□□□ 0.02
SYNE2-207ENST00000458046 UNCXA6NJT0 531 aa15.16■□□□□ 0.02
SYNE2-207ENST00000458046 WDR70Q9NW82 654 aa15.15■□□□□ 0.02
SYNE2-207ENST00000458046 KDM2BQ8NHM5 1336 aa15.15■□□□□ 0.02
SYNE2-207ENST00000458046 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.15■□□□□ 0.02
SYNE2-207ENST00000458046 KCNV2Q8TDN2 545 aa15.14■□□□□ 0.01
SYNE2-207ENST00000458046 BCAR3O75815 825 aa15.14■□□□□ 0.01
SYNE2-207ENST00000458046 POTEAQ6S8J7 498 aa15.14■□□□□ 0.01
SYNE2-207ENST00000458046 PIK3C2GO75747 1445 aa15.14■□□□□ 0.01
SYNE2-207ENST00000458046 CENPQQ7L2Z9 268 aaPredicted RBP15.13■□□□□ 0.01
SYNE2-207ENST00000458046 SYNMO15061 1565 aa15.13■□□□□ 0.01
SYNE2-207ENST00000458046 UGGT1Q9NYU2 1555 aa15.13■□□□□ 0.01
SYNE2-207ENST00000458046 CHRM1P11229 460 aaPredicted RBP15.13■□□□□ 0.01
SYNE2-207ENST00000458046 SPHKAPQ2M3C7 1700 aa15.13■□□□□ 0.01
SYNE2-207ENST00000458046 KCNG1Q9UIX4 513 aa15.12■□□□□ 0.01
SYNE2-207ENST00000458046 ZNF142P52746 1687 aaPredicted RBP15.12■□□□□ 0.01
SYNE2-207ENST00000458046 ALKQ9UM73 1620 aa15.12■□□□□ 0.01
SYNE2-207ENST00000458046 TNNT2P45379 298 aaPredicted RBP15.12■□□□□ 0.01
SYNE2-207ENST00000458046 NEFMP07197 916 aa15.11■□□□□ 0.01
SYNE2-207ENST00000458046 TRMT2AQ8IZ69 625 aaKnown RBP15.11■□□□□ 0.01
SYNE2-207ENST00000458046 CEP152O94986 1710 aa15.11■□□□□ 0.01
SYNE2-207ENST00000458046 RGS3P49796 1198 aa15.11■□□□□ 0.01
SYNE2-207ENST00000458046 NPC1L1Q9UHC9 1359 aa15.11■□□□□ 0.01
SYNE2-207ENST00000458046 SLC4A3P48751 1232 aa15.1■□□□□ 0.01
SYNE2-207ENST00000458046 ATP7AQ04656 1500 aa15.1■□□□□ 0.01
SYNE2-207ENST00000458046 SECISBP2LQ93073 1101 aaKnown RBP15.1■□□□□ 0.01
SYNE2-207ENST00000458046 TRAK1Q9UPV9 953 aa15.1■□□□□ 0.01
SYNE2-207ENST00000458046 MAFGO15525 162 aa15.1■□□□□ 0.01
SYNE2-207ENST00000458046 ERVK-7P63135 1459 aa15.09■□□□□ 0.01
SYNE2-207ENST00000458046 SETQ01105 290 aaPredicted RBP15.09■□□□□ 0.01
SYNE2-207ENST00000458046 HS6ST3Q8IZP7 471 aa15.09■□□□□ 0.01
SYNE2-207ENST00000458046 PROM2Q8N271 834 aa15.09■□□□□ 0.01
SYNE2-207ENST00000458046 CAMSAP1Q5T5Y3 1602 aa15.09■□□□□ 0.01
SYNE2-207ENST00000458046 TET3O43151 1660 aa15.09■□□□□ 0.01
SYNE2-207ENST00000458046 BARGINQ6ZT62 677 aa15.09■□□□□ 0.01
SYNE2-207ENST00000458046 WWC1Q8IX03 1113 aa15.09■□□□□ 0.01
SYNE2-207ENST00000458046 RIPOR2Q9Y4F9 1068 aa15.09■□□□□ 0.01
SYNE2-207ENST00000458046 MYOM1P52179 1685 aa15.08■□□□□ 0
SYNE2-207ENST00000458046 IGSF5Q9NSI5 407 aa15.08■□□□□ 0
SYNE2-207ENST00000458046 DEPDC5O75140 1603 aa15.07■□□□□ 0
SYNE2-207ENST00000458046 SLC34A2O95436 690 aa15.07■□□□□ 0
SYNE2-207ENST00000458046 GRIPAP1Q4V328 841 aa15.07■□□□□ 0
SYNE2-207ENST00000458046 TRAK2O60296 914 aa15.07■□□□□ 0
SYNE2-207ENST00000458046 SLC12A5Q9H2X9 1139 aa15.07■□□□□ 0
SYNE2-207ENST00000458046 NPATQ14207 1427 aa15.06■□□□□ 0
SYNE2-207ENST00000458046 TMEM132EQ6IEE7 984 aa15.06■□□□□ 0
SYNE2-207ENST00000458046 DDRGK1Q96HY6 314 aa15.06■□□□□ 0
SYNE2-207ENST00000458046 NAP1L2Q9ULW6 460 aaPredicted RBP15.06■□□□□ 0
SYNE2-207ENST00000458046 NKTRP30414 1462 aaKnown RBP15.06■□□□□ 0
SYNE2-207ENST00000458046 FAM161AQ3B820 660 aa15.06■□□□□ 0
SYNE2-207ENST00000458046 GGT6Q6P531 493 aa15.06■□□□□ 0
SYNE2-207ENST00000458046 EXOC8Q8IYI6 725 aa15.06■□□□□ 0
SYNE2-207ENST00000458046 RRP7AQ9Y3A4 280 aaKnown RBP15.06■□□□□ 0
SYNE2-207ENST00000458046 KDM5AP29375 1690 aaKnown RBP15.05■□□□□ 0
SYNE2-207ENST00000458046 CENPJQ9HC77 1338 aaPredicted RBP15.05■□□□□ 0
SYNE2-207ENST00000458046 MORC1Q86VD1 984 aa15.05■□□□□ 0
SYNE2-207ENST00000458046 SGSM3Q96HU1 749 aa15.05■□□□□ 0
SYNE2-207ENST00000458046 VWDEQ8N2E2 1590 aa15.05■□□□□ -0
SYNE2-207ENST00000458046 C8orf34Q49A92 452 aa15.05■□□□□ -0
SYNE2-207ENST00000458046 C3P01024 1663 aa15.05■□□□□ -0
SYNE2-207ENST00000458046 ZNF335Q9H4Z2 1342 aaPredicted RBP15.04■□□□□ -0
SYNE2-207ENST00000458046 NOS1P29475 1434 aa15.04■□□□□ -0
SYNE2-207ENST00000458046 INO80Q9ULG1 1556 aaPredicted RBP15.04■□□□□ -0
SYNE2-207ENST00000458046 SIGLEC1Q9BZZ2 1709 aa15.04■□□□□ -0
SYNE2-207ENST00000458046 ABCA6Q8N139 1617 aa15.03■□□□□ -0
SYNE2-207ENST00000458046 GTPBP6O43824 516 aaPredicted RBP15.03■□□□□ -0
SYNE2-207ENST00000458046 IGHDP01880 384 aa15.03■□□□□ -0
SYNE2-207ENST00000458046 MYCNP04198 464 aaPredicted RBP15.03■□□□□ -0
SYNE2-207ENST00000458046 NUTM2DQ5VT03 806 aaPredicted RBP15.03■□□□□ -0
SYNE2-207ENST00000458046 CANXP27824 592 aaKnown RBP15.03■□□□□ -0
SYNE2-207ENST00000458046 RNF216Q9NWF9 866 aaPredicted RBP15.03■□□□□ -0
SYNE2-207ENST00000458046 REREQ9P2R6 1566 aa15.02■□□□□ -0
SYNE2-207ENST00000458046 PANK1Q8TE04 598 aa15.02■□□□□ -0
SYNE2-207ENST00000458046 MYOM2P54296 1465 aa15.02■□□□□ -0
SYNE2-207ENST00000458046 FRAT1Q92837 279 aaPredicted RBP15.02□□□□□ -0.01
SYNE2-207ENST00000458046 COG6Q9Y2V7 657 aa15.02□□□□□ -0.01
SYNE2-207ENST00000458046 PTMSP20962 102 aa15.01□□□□□ -0.01
SYNE2-207ENST00000458046 MROH1Q8NDA8 1641 aa15.01□□□□□ -0.01
SYNE2-207ENST00000458046 NOL8Q76FK4 1167 aaKnown RBP15.01□□□□□ -0.01
SYNE2-207ENST00000458046 GPATCH11Q8N954 259 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms