RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 NHSL1Q5SYE7 1610 aa19.36■□□□□ 0.69
LINC00887-204ENST00000456816 AHDC1Q5TGY3 1603 aaPredicted RBP19.36■□□□□ 0.69
LINC00887-204ENST00000456816 PXDNQ92626 1479 aa19.35■□□□□ 0.69
LINC00887-204ENST00000456816 CGNL1Q0VF96 1302 aa19.35■□□□□ 0.69
LINC00887-204ENST00000456816 TTC21BQ7Z4L5 1316 aa19.35■□□□□ 0.69
LINC00887-204ENST00000456816 CNGB1Q14028 1251 aaPredicted RBP19.35■□□□□ 0.69
LINC00887-204ENST00000456816 MON2Q7Z3U7 1717 aa19.34■□□□□ 0.69
LINC00887-204ENST00000456816 SBNO1A3KN83 1393 aa19.34■□□□□ 0.69
LINC00887-204ENST00000456816 SOS2Q07890 1332 aaPredicted RBP19.34■□□□□ 0.69
LINC00887-204ENST00000456816 TTC21AQ8NDW8 1320 aa19.34■□□□□ 0.69
LINC00887-204ENST00000456816 PHLPP1O60346 1717 aa19.34■□□□□ 0.69
LINC00887-204ENST00000456816 PLEKHG5O94827 1062 aa19.33■□□□□ 0.68
LINC00887-204ENST00000456816 ABTB2Q8N961 1025 aa19.33■□□□□ 0.68
LINC00887-204ENST00000456816 TNS3Q68CZ2 1445 aa19.33■□□□□ 0.68
LINC00887-204ENST00000456816 NUTM2GQ5VZR2 741 aa19.32■□□□□ 0.68
LINC00887-204ENST00000456816 LRRC59Q96AG4 307 aaKnown RBP19.32■□□□□ 0.68
LINC00887-204ENST00000456816 NME9Q86XW9 330 aa19.31■□□□□ 0.68
LINC00887-204ENST00000456816 NRKQ7Z2Y5 1582 aa19.31■□□□□ 0.68
LINC00887-204ENST00000456816 ARHGEF10O15013 1369 aa19.31■□□□□ 0.68
LINC00887-204ENST00000456816 SPATA31A3Q5VYP0 1347 aa19.3■□□□□ 0.68
LINC00887-204ENST00000456816 SSH2Q76I76 1423 aa19.3■□□□□ 0.68
LINC00887-204ENST00000456816 TRPM3Q9HCF6 1732 aaPredicted RBP19.29■□□□□ 0.68
LINC00887-204ENST00000456816 HSPA1LP34931 641 aa19.29■□□□□ 0.68
LINC00887-204ENST00000456816 NLRP6P59044 892 aa19.29■□□□□ 0.68
LINC00887-204ENST00000456816 GGNBP2Q9H3C7 697 aa19.29■□□□□ 0.68
LINC00887-204ENST00000456816 PER1O15534 1290 aaPredicted RBP19.28■□□□□ 0.68
LINC00887-204ENST00000456816 CC2D1BQ5T0F9 858 aaKnown RBP19.28■□□□□ 0.68
LINC00887-204ENST00000456816 COG3Q96JB2 828 aa19.28■□□□□ 0.68
LINC00887-204ENST00000456816 COL16A1Q07092 1604 aaPredicted RBP19.27■□□□□ 0.68
LINC00887-204ENST00000456816 NLRP13Q86W25 1043 aa19.27■□□□□ 0.68
LINC00887-204ENST00000456816 FYB1O15117 783 aa19.26■□□□□ 0.67
LINC00887-204ENST00000456816 HAP1P54257 671 aaPredicted RBP19.26■□□□□ 0.67
LINC00887-204ENST00000456816 ZRANB1Q9UGI0 708 aa19.26■□□□□ 0.67
LINC00887-204ENST00000456816 NSD2O96028 1365 aa19.26■□□□□ 0.67
LINC00887-204ENST00000456816 AMER1Q5JTC6 1135 aaPredicted RBP19.25■□□□□ 0.67
LINC00887-204ENST00000456816 PIK3C2AO00443 1686 aa19.24■□□□□ 0.67
LINC00887-204ENST00000456816 KIF20BQ96Q89 1820 aa19.24■□□□□ 0.67
LINC00887-204ENST00000456816 SOX12O15370 315 aa19.24■□□□□ 0.67
LINC00887-204ENST00000456816 MORC1Q86VD1 984 aa19.24■□□□□ 0.67
LINC00887-204ENST00000456816 ALS2Q96Q42 1657 aa19.23■□□□□ 0.67
LINC00887-204ENST00000456816 PNPLA6Q8IY17 1366 aa19.22■□□□□ 0.67
LINC00887-204ENST00000456816 JCADQ9P266 1359 aa19.22■□□□□ 0.67
LINC00887-204ENST00000456816 TNNT2P45379 298 aaPredicted RBP19.22■□□□□ 0.67
LINC00887-204ENST00000456816 USP31Q70CQ4 1352 aa19.21■□□□□ 0.67
LINC00887-204ENST00000456816 NPC1L1Q9UHC9 1359 aa19.21■□□□□ 0.67
LINC00887-204ENST00000456816 DIEXFQ68CQ4 756 aaKnown RBP19.21■□□□□ 0.67
LINC00887-204ENST00000456816 CABLES1Q8TDN4 633 aa19.21■□□□□ 0.67
LINC00887-204ENST00000456816 OVOS2A0A0J9YW53 1432 aa19.2■□□□□ 0.66
LINC00887-204ENST00000456816 OVOS2Q6IE36 1432 aa19.2■□□□□ 0.66
LINC00887-204ENST00000456816 ANP32CO43423 234 aa19.19■□□□□ 0.66
LINC00887-204ENST00000456816 ZBTB7CA1YPR0 619 aa19.18■□□□□ 0.66
LINC00887-204ENST00000456816 NUTM2BA6NNL0 878 aaPredicted RBP19.18■□□□□ 0.66
LINC00887-204ENST00000456816 NUTM2EB1AL46 878 aaPredicted RBP19.18■□□□□ 0.66
LINC00887-204ENST00000456816 NUTM2AQ8IVF1 878 aaPredicted RBP19.18■□□□□ 0.66
LINC00887-204ENST00000456816 KCNH5Q8NCM2 988 aa19.18■□□□□ 0.66
LINC00887-204ENST00000456816 USP19O94966 1318 aa19.18■□□□□ 0.66
LINC00887-204ENST00000456816 MED1Q15648 1581 aaPredicted RBP19.17■□□□□ 0.66
LINC00887-204ENST00000456816 GCP02774 474 aa19.16■□□□□ 0.66
LINC00887-204ENST00000456816 ANKRD26Q9UPS8 1709 aa19.15■□□□□ 0.66
LINC00887-204ENST00000456816 COL22A1Q8NFW1 1626 aaPredicted RBP19.14■□□□□ 0.66
LINC00887-204ENST00000456816 SHPRHQ149N8 1683 aa19.14■□□□□ 0.66
LINC00887-204ENST00000456816 ZC3H6P61129 1189 aaKnown RBP19.14■□□□□ 0.65
LINC00887-204ENST00000456816 RALBP1Q15311 655 aa19.14■□□□□ 0.65
LINC00887-204ENST00000456816 SLIT3O75094 1523 aa19.14■□□□□ 0.65
LINC00887-204ENST00000456816 USP54Q70EL1 1684 aa19.14■□□□□ 0.65
LINC00887-204ENST00000456816 SPATA31A6Q5VVP1 1343 aa19.13■□□□□ 0.65
LINC00887-204ENST00000456816 PHRF1Q9P1Y6 1649 aaKnown RBP19.12■□□□□ 0.65
LINC00887-204ENST00000456816 PARD3Q8TEW0 1356 aa19.12■□□□□ 0.65
LINC00887-204ENST00000456816 PPM1GO15355 546 aaPredicted RBP19.12■□□□□ 0.65
LINC00887-204ENST00000456816 ADAMTS2O95450 1211 aa19.12■□□□□ 0.65
LINC00887-204ENST00000456816 FBLN1P23142 703 aa19.11■□□□□ 0.65
LINC00887-204ENST00000456816 RRS1Q15050 365 aaKnown RBP19.11■□□□□ 0.65
LINC00887-204ENST00000456816 MEX3CQ5U5Q3 659 aaKnown RBP19.11■□□□□ 0.65
LINC00887-204ENST00000456816 PRKRIP1Q9H875 184 aaPredicted RBP19.11■□□□□ 0.65
LINC00887-204ENST00000456816 MARF1Q9Y4F3 1742 aaKnown RBP19.11■□□□□ 0.65
LINC00887-204ENST00000456816 PRDM11Q9NQV5 511 aa19.1■□□□□ 0.65
LINC00887-204ENST00000456816 NFAT5O94916 1531 aa19.1■□□□□ 0.65
LINC00887-204ENST00000456816 ABCA3Q99758 1704 aa19.09■□□□□ 0.65
LINC00887-204ENST00000456816 AMPHP49418 695 aa19.09■□□□□ 0.65
LINC00887-204ENST00000456816 CRYBG1Q9Y4K1 1723 aa19.08■□□□□ 0.65
LINC00887-204ENST00000456816 AATKQ6ZMQ8 1374 aa19.08■□□□□ 0.65
LINC00887-204ENST00000456816 KIAA0232Q92628 1395 aa19.08■□□□□ 0.65
LINC00887-204ENST00000456816 MYBBP1AQ9BQG0 1328 aaKnown RBP19.08■□□□□ 0.65
LINC00887-204ENST00000456816 MAP3K19Q56UN5 1328 aa19.07■□□□□ 0.64
LINC00887-204ENST00000456816 PPP2R1AP30153 589 aa19.07■□□□□ 0.64
LINC00887-204ENST00000456816 CHRNA2Q15822 529 aa19.07■□□□□ 0.64
LINC00887-204ENST00000456816 EMILIN1Q9Y6C2 1016 aa19.07■□□□□ 0.64
LINC00887-204ENST00000456816 ARHGEF25Q86VW2 580 aa19.06■□□□□ 0.64
LINC00887-204ENST00000456816 POLKQ9UBT6 870 aa19.06■□□□□ 0.64
LINC00887-204ENST00000456816 CPDO75976 1380 aa19.06■□□□□ 0.64
LINC00887-204ENST00000456816 MTHFSP49914 203 aa19.05■□□□□ 0.64
LINC00887-204ENST00000456816 CFAP53Q96M91 514 aa19.04■□□□□ 0.64
LINC00887-204ENST00000456816 C8orf37Q96NL8 207 aa19.04■□□□□ 0.64
LINC00887-204ENST00000456816 RTL1A6NKG5 1358 aa19.03■□□□□ 0.64
LINC00887-204ENST00000456816 FLT4P35916 1363 aa19.03■□□□□ 0.64
LINC00887-204ENST00000456816 LRP6O75581 1613 aa19.03■□□□□ 0.64
LINC00887-204ENST00000456816 FAM83GA6ND36 823 aa19.02■□□□□ 0.64
LINC00887-204ENST00000456816 NGLY1Q96IV0 654 aa19.02■□□□□ 0.64
LINC00887-204ENST00000456816 HOXC9P31274 260 aa19.01■□□□□ 0.63
LINC00887-204ENST00000456816 IP6K1Q92551 441 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms