RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 TRPM3Q9HCF6 1732 aaPredicted RBP24.72■■□□□ 1.55
FAM239A-203ENST00000456563 TNS3Q68CZ2 1445 aa24.7■■□□□ 1.55
FAM239A-203ENST00000456563 PAK3O75914 559 aaPredicted RBP24.69■■□□□ 1.54
FAM239A-203ENST00000456563 MON2Q7Z3U7 1717 aa24.69■■□□□ 1.54
FAM239A-203ENST00000456563 EDC4Q6P2E9 1401 aaKnown RBP24.69■■□□□ 1.54
FAM239A-203ENST00000456563 JCADQ9P266 1359 aa24.68■■□□□ 1.54
FAM239A-203ENST00000456563 TTC21BQ7Z4L5 1316 aa24.68■■□□□ 1.54
FAM239A-203ENST00000456563 TTC21AQ8NDW8 1320 aa24.67■■□□□ 1.54
FAM239A-203ENST00000456563 PANK3Q9H999 370 aa24.67■■□□□ 1.54
FAM239A-203ENST00000456563 ARHGEF10O15013 1369 aa24.67■■□□□ 1.54
FAM239A-203ENST00000456563 PNPLA6Q8IY17 1366 aa24.67■■□□□ 1.54
FAM239A-203ENST00000456563 CARD14Q9BXL6 1004 aa24.66■■□□□ 1.54
FAM239A-203ENST00000456563 NRKQ7Z2Y5 1582 aa24.66■■□□□ 1.54
FAM239A-203ENST00000456563 ZNF316A6NFI3 1004 aaPredicted RBP24.65■■□□□ 1.54
FAM239A-203ENST00000456563 ALS2Q96Q42 1657 aa24.65■■□□□ 1.54
FAM239A-203ENST00000456563 LMOD2Q6P5Q4 547 aa24.63■■□□□ 1.53
FAM239A-203ENST00000456563 ABTB2Q8N961 1025 aa24.63■■□□□ 1.53
FAM239A-203ENST00000456563 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.62■■□□□ 1.53
FAM239A-203ENST00000456563 SHPRHQ149N8 1683 aa24.62■■□□□ 1.53
FAM239A-203ENST00000456563 NSD3Q9BZ95 1437 aa24.61■■□□□ 1.53
FAM239A-203ENST00000456563 COL22A1Q8NFW1 1626 aaPredicted RBP24.59■■□□□ 1.53
FAM239A-203ENST00000456563 SPATA31A6Q5VVP1 1343 aa24.59■■□□□ 1.53
FAM239A-203ENST00000456563 NLRP13Q86W25 1043 aa24.58■■□□□ 1.53
FAM239A-203ENST00000456563 USP31Q70CQ4 1352 aa24.57■■□□□ 1.52
FAM239A-203ENST00000456563 PIK3C2AO00443 1686 aa24.57■■□□□ 1.52
FAM239A-203ENST00000456563 NLRP6P59044 892 aa24.57■■□□□ 1.52
FAM239A-203ENST00000456563 NME9Q86XW9 330 aa24.57■■□□□ 1.52
FAM239A-203ENST00000456563 MED1Q15648 1581 aaPredicted RBP24.56■■□□□ 1.52
FAM239A-203ENST00000456563 PER1O15534 1290 aaPredicted RBP24.56■■□□□ 1.52
FAM239A-203ENST00000456563 NUTM2GQ5VZR2 741 aa24.56■■□□□ 1.52
FAM239A-203ENST00000456563 FYB1O15117 783 aa24.55■■□□□ 1.52
FAM239A-203ENST00000456563 USP19O94966 1318 aa24.55■■□□□ 1.52
FAM239A-203ENST00000456563 CGNL1Q0VF96 1302 aa24.55■■□□□ 1.52
FAM239A-203ENST00000456563 KNSTRNQ9Y448 316 aa24.54■■□□□ 1.52
FAM239A-203ENST00000456563 ZRANB1Q9UGI0 708 aa24.53■■□□□ 1.52
FAM239A-203ENST00000456563 CABLES1Q8TDN4 633 aa24.52■■□□□ 1.52
FAM239A-203ENST00000456563 OVOS2A0A0J9YW53 1432 aa24.52■■□□□ 1.52
FAM239A-203ENST00000456563 OVOS2Q6IE36 1432 aa24.52■■□□□ 1.52
FAM239A-203ENST00000456563 USP54Q70EL1 1684 aa24.5■■□□□ 1.51
FAM239A-203ENST00000456563 DDX10Q13206 875 aaKnown RBP24.5■■□□□ 1.51
FAM239A-203ENST00000456563 GGNBP2Q9H3C7 697 aa24.5■■□□□ 1.51
FAM239A-203ENST00000456563 NUTM2BA6NNL0 878 aaPredicted RBP24.49■■□□□ 1.51
FAM239A-203ENST00000456563 NUTM2EB1AL46 878 aaPredicted RBP24.49■■□□□ 1.51
FAM239A-203ENST00000456563 AMER1Q5JTC6 1135 aaPredicted RBP24.49■■□□□ 1.51
FAM239A-203ENST00000456563 NUTM2AQ8IVF1 878 aaPredicted RBP24.49■■□□□ 1.51
FAM239A-203ENST00000456563 COG3Q96JB2 828 aa24.49■■□□□ 1.51
FAM239A-203ENST00000456563 SLIT3O75094 1523 aa24.49■■□□□ 1.51
FAM239A-203ENST00000456563 CRYBG1Q9Y4K1 1723 aa24.49■■□□□ 1.51
FAM239A-203ENST00000456563 PLEKHG5O94827 1062 aa24.48■■□□□ 1.51
FAM239A-203ENST00000456563 NSD2O96028 1365 aa24.48■■□□□ 1.51
FAM239A-203ENST00000456563 GCP02774 474 aa24.47■■□□□ 1.51
FAM239A-203ENST00000456563 HAP1P54257 671 aaPredicted RBP24.47■■□□□ 1.51
FAM239A-203ENST00000456563 KIF20BQ96Q89 1820 aa24.47■■□□□ 1.51
FAM239A-203ENST00000456563 MARF1Q9Y4F3 1742 aaKnown RBP24.47■■□□□ 1.51
FAM239A-203ENST00000456563 LRP6O75581 1613 aa24.46■■□□□ 1.51
FAM239A-203ENST00000456563 KCNH5Q8NCM2 988 aa24.46■■□□□ 1.51
FAM239A-203ENST00000456563 ABCA3Q99758 1704 aa24.46■■□□□ 1.51
FAM239A-203ENST00000456563 PHRF1Q9P1Y6 1649 aaKnown RBP24.46■■□□□ 1.51
FAM239A-203ENST00000456563 NPC1L1Q9UHC9 1359 aa24.45■■□□□ 1.5
FAM239A-203ENST00000456563 ADAMTS2O95450 1211 aa24.42■■□□□ 1.5
FAM239A-203ENST00000456563 CPDO75976 1380 aa24.41■■□□□ 1.5
FAM239A-203ENST00000456563 NFAT5O94916 1531 aa24.4■■□□□ 1.5
FAM239A-203ENST00000456563 ZC3H6P61129 1189 aaKnown RBP24.39■■□□□ 1.49
FAM239A-203ENST00000456563 SOX12O15370 315 aa24.38■■□□□ 1.49
FAM239A-203ENST00000456563 MEX3CQ5U5Q3 659 aaKnown RBP24.38■■□□□ 1.49
FAM239A-203ENST00000456563 KIAA0232Q92628 1395 aa24.38■■□□□ 1.49
FAM239A-203ENST00000456563 ANKRD26Q9UPS8 1709 aa24.38■■□□□ 1.49
FAM239A-203ENST00000456563 CC2D1BQ5T0F9 858 aaKnown RBP24.37■■□□□ 1.49
FAM239A-203ENST00000456563 MORC1Q86VD1 984 aa24.37■■□□□ 1.49
FAM239A-203ENST00000456563 ARHGEF25Q86VW2 580 aa24.37■■□□□ 1.49
FAM239A-203ENST00000456563 FAM83GA6ND36 823 aa24.36■■□□□ 1.49
FAM239A-203ENST00000456563 PRDM11Q9NQV5 511 aa24.36■■□□□ 1.49
FAM239A-203ENST00000456563 AATKQ6ZMQ8 1374 aa24.34■■□□□ 1.49
FAM239A-203ENST00000456563 C8orf37Q96NL8 207 aa24.34■■□□□ 1.49
FAM239A-203ENST00000456563 FBLN1P23142 703 aa24.33■■□□□ 1.49
FAM239A-203ENST00000456563 NGLY1Q96IV0 654 aa24.33■■□□□ 1.49
FAM239A-203ENST00000456563 FNBP4Q8N3X1 1017 aaPredicted RBP24.32■■□□□ 1.48
FAM239A-203ENST00000456563 CHRNA2Q15822 529 aa24.31■■□□□ 1.48
FAM239A-203ENST00000456563 MAP3K19Q56UN5 1328 aa24.31■■□□□ 1.48
FAM239A-203ENST00000456563 COL14A1Q05707 1796 aaKnown RBP24.3■■□□□ 1.48
FAM239A-203ENST00000456563 TNNT2P45379 298 aaPredicted RBP24.3■■□□□ 1.48
FAM239A-203ENST00000456563 SLIT2O94813 1529 aa24.3■■□□□ 1.48
FAM239A-203ENST00000456563 CNGB1Q14028 1251 aaPredicted RBP24.29■■□□□ 1.48
FAM239A-203ENST00000456563 RRS1Q15050 365 aaKnown RBP24.29■■□□□ 1.48
FAM239A-203ENST00000456563 ZBTB7CA1YPR0 619 aa24.28■■□□□ 1.48
FAM239A-203ENST00000456563 ABCC6O95255 1503 aa24.28■■□□□ 1.48
FAM239A-203ENST00000456563 AFF2P51816 1311 aa24.28■■□□□ 1.48
FAM239A-203ENST00000456563 POLKQ9UBT6 870 aa24.27■■□□□ 1.48
FAM239A-203ENST00000456563 LMO7Q8WWI1 1683 aa24.27■■□□□ 1.48
FAM239A-203ENST00000456563 KIF24Q5T7B8 1368 aa24.27■■□□□ 1.48
FAM239A-203ENST00000456563 IP6K1Q92551 441 aa24.26■■□□□ 1.47
FAM239A-203ENST00000456563 BTG4Q9NY30 223 aa24.26■■□□□ 1.47
FAM239A-203ENST00000456563 RTL1A6NKG5 1358 aa24.26■■□□□ 1.47
FAM239A-203ENST00000456563 COL18A1P39060 1754 aa24.26■■□□□ 1.47
FAM239A-203ENST00000456563 AMPHP49418 695 aa24.25■■□□□ 1.47
FAM239A-203ENST00000456563 AXIN2Q9Y2T1 843 aa24.25■■□□□ 1.47
FAM239A-203ENST00000456563 EMILIN1Q9Y6C2 1016 aa24.25■■□□□ 1.47
FAM239A-203ENST00000456563 PARD3Q8TEW0 1356 aa24.25■■□□□ 1.47
FAM239A-203ENST00000456563 BCL9LQ86UU0 1499 aa24.25■■□□□ 1.47
FAM239A-203ENST00000456563 CAMTA1Q9Y6Y1 1673 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms