RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 BACH2Q9BYV9 841 aa13.18□□□□□ -0.3
CHCHD4P3-201ENST00000455954 RGS17Q9UGC6 210 aaPredicted RBP13.18□□□□□ -0.3
CHCHD4P3-201ENST00000455954 VIRMAQ69YN4 1812 aaKnown RBP13.18□□□□□ -0.3
CHCHD4P3-201ENST00000455954 NPHP3Q7Z494 1330 aa13.17□□□□□ -0.3
CHCHD4P3-201ENST00000455954 FMN2Q9NZ56 1722 aa13.17□□□□□ -0.3
CHCHD4P3-201ENST00000455954 CARD11Q9BXL7 1154 aa13.17□□□□□ -0.3
CHCHD4P3-201ENST00000455954 NUTM2BA6NNL0 878 aaPredicted RBP13.16□□□□□ -0.3
CHCHD4P3-201ENST00000455954 NUTM2EB1AL46 878 aaPredicted RBP13.16□□□□□ -0.3
CHCHD4P3-201ENST00000455954 SOCS7O14512 581 aa13.16□□□□□ -0.3
CHCHD4P3-201ENST00000455954 FOXO3O43524 673 aa13.16□□□□□ -0.3
CHCHD4P3-201ENST00000455954 PDE4AP27815 886 aa13.16□□□□□ -0.3
CHCHD4P3-201ENST00000455954 MEX3CQ5U5Q3 659 aaKnown RBP13.16□□□□□ -0.3
CHCHD4P3-201ENST00000455954 NUTM2AQ8IVF1 878 aaPredicted RBP13.16□□□□□ -0.3
CHCHD4P3-201ENST00000455954 PNPLA6Q8IY17 1366 aa13.16□□□□□ -0.3
CHCHD4P3-201ENST00000455954 KIAA1210Q9ULL0 1709 aa13.16□□□□□ -0.3
CHCHD4P3-201ENST00000455954 LRP6O75581 1613 aa13.15□□□□□ -0.3
CHCHD4P3-201ENST00000455954 MINK1Q8N4C8 1332 aaPredicted RBP13.14□□□□□ -0.31
CHCHD4P3-201ENST00000455954 NBPF1Q3BBV0 1214 aa13.14□□□□□ -0.31
CHCHD4P3-201ENST00000455954 PHF8Q9UPP1 1060 aa13.14□□□□□ -0.31
CHCHD4P3-201ENST00000455954 ADGRB2O60241 1585 aa13.13□□□□□ -0.31
CHCHD4P3-201ENST00000455954 WASLO00401 505 aaPredicted RBP13.13□□□□□ -0.31
CHCHD4P3-201ENST00000455954 ANKARQ7Z5J8 1434 aa13.13□□□□□ -0.31
CHCHD4P3-201ENST00000455954 KIF1AQ12756 1690 aa13.12□□□□□ -0.31
CHCHD4P3-201ENST00000455954 PXDNQ92626 1479 aa13.12□□□□□ -0.31
CHCHD4P3-201ENST00000455954 EIF3AQ14152 1382 aaKnown RBP13.12□□□□□ -0.31
CHCHD4P3-201ENST00000455954 XPCQ01831 940 aaPredicted RBP13.12□□□□□ -0.31
CHCHD4P3-201ENST00000455954 POTEAQ6S8J7 498 aa13.12□□□□□ -0.31
CHCHD4P3-201ENST00000455954 EXOC6Q8TAG9 804 aa13.12□□□□□ -0.31
CHCHD4P3-201ENST00000455954 ARHGEF28Q8N1W1 1705 aaKnown RBP13.11□□□□□ -0.31
CHCHD4P3-201ENST00000455954 ZNF772Q68DY9 489 aaPredicted RBP13.11□□□□□ -0.31
CHCHD4P3-201ENST00000455954 KRT28Q7Z3Y7 464 aa13.11□□□□□ -0.31
CHCHD4P3-201ENST00000455954 PSME1Q06323 249 aa13.1□□□□□ -0.31
CHCHD4P3-201ENST00000455954 RGPD8O14715 1765 aaPredicted RBP13.09□□□□□ -0.31
CHCHD4P3-201ENST00000455954 ST20-MTHFSA0A0A6YYL1 179 aa13.09□□□□□ -0.31
CHCHD4P3-201ENST00000455954 USP32Q8NFA0 1604 aa13.09□□□□□ -0.31
CHCHD4P3-201ENST00000455954 SPATA31A3Q5VYP0 1347 aa13.09□□□□□ -0.31
CHCHD4P3-201ENST00000455954 TULP4Q9NRJ4 1543 aa13.08□□□□□ -0.31
CHCHD4P3-201ENST00000455954 ADAMTS2O95450 1211 aa13.08□□□□□ -0.32
CHCHD4P3-201ENST00000455954 PMFBP1Q8TBY8 1022 aa13.08□□□□□ -0.32
CHCHD4P3-201ENST00000455954 POLR3GLQ9BT43 218 aa13.08□□□□□ -0.32
CHCHD4P3-201ENST00000455954 COL22A1Q8NFW1 1626 aaPredicted RBP13.08□□□□□ -0.32
CHCHD4P3-201ENST00000455954 PRR36Q9H6K5 1346 aa13.08□□□□□ -0.32
CHCHD4P3-201ENST00000455954 NEFMP07197 916 aa13.07□□□□□ -0.32
CHCHD4P3-201ENST00000455954 C8orf37Q96NL8 207 aa13.07□□□□□ -0.32
CHCHD4P3-201ENST00000455954 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
CHCHD4P3-201ENST00000455954 AFF2P51816 1311 aa13.07□□□□□ -0.32
CHCHD4P3-201ENST00000455954 CENPJQ9HC77 1338 aaPredicted RBP13.07□□□□□ -0.32
CHCHD4P3-201ENST00000455954 NUDT16Q96DE0 195 aaKnown RBP13.06□□□□□ -0.32
CHCHD4P3-201ENST00000455954 NGLY1Q96IV0 654 aa13.06□□□□□ -0.32
CHCHD4P3-201ENST00000455954 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
CHCHD4P3-201ENST00000455954 PER1O15534 1290 aaPredicted RBP13.05□□□□□ -0.32
CHCHD4P3-201ENST00000455954 CENPQQ7L2Z9 268 aaPredicted RBP13.05□□□□□ -0.32
CHCHD4P3-201ENST00000455954 KDM2BQ8NHM5 1336 aa13.05□□□□□ -0.32
CHCHD4P3-201ENST00000455954 TNS3Q68CZ2 1445 aa13.05□□□□□ -0.32
CHCHD4P3-201ENST00000455954 NGDNQ8NEJ9 315 aaKnown RBP13.04□□□□□ -0.32
CHCHD4P3-201ENST00000455954 RXRBP28702 533 aa13.03□□□□□ -0.32
CHCHD4P3-201ENST00000455954 LMOD2Q6P5Q4 547 aa13.03□□□□□ -0.32
CHCHD4P3-201ENST00000455954 CCDC61Q9Y6R9 512 aa13.03□□□□□ -0.32
CHCHD4P3-201ENST00000455954 ATP7BP35670 1465 aa13.03□□□□□ -0.32
CHCHD4P3-201ENST00000455954 SRPK2P78362 688 aaKnown RBP13.02□□□□□ -0.33
CHCHD4P3-201ENST00000455954 FNBP4Q8N3X1 1017 aaPredicted RBP13.02□□□□□ -0.33
CHCHD4P3-201ENST00000455954 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.02□□□□□ -0.33
CHCHD4P3-201ENST00000455954 ARHGEF10O15013 1369 aa13.02□□□□□ -0.33
CHCHD4P3-201ENST00000455954 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.33
CHCHD4P3-201ENST00000455954 NPM2Q86SE8 214 aaKnown RBP13.01□□□□□ -0.33
CHCHD4P3-201ENST00000455954 QTRT2Q9H974 415 aaKnown RBP13.01□□□□□ -0.33
CHCHD4P3-201ENST00000455954 USP21Q9UK80 565 aa13.01□□□□□ -0.33
CHCHD4P3-201ENST00000455954 ITSN1Q15811 1721 aa13.01□□□□□ -0.33
CHCHD4P3-201ENST00000455954 NINLQ9Y2I6 1382 aa13□□□□□ -0.33
CHCHD4P3-201ENST00000455954 PLEKHG3A1L390 1219 aa13□□□□□ -0.33
CHCHD4P3-201ENST00000455954 HAP1P54257 671 aaPredicted RBP13□□□□□ -0.33
CHCHD4P3-201ENST00000455954 NGEFQ8N5V2 710 aa13□□□□□ -0.33
CHCHD4P3-201ENST00000455954 CRBNQ96SW2 442 aa13□□□□□ -0.33
CHCHD4P3-201ENST00000455954 CABP2Q9NPB3 220 aa13□□□□□ -0.33
CHCHD4P3-201ENST00000455954 QRICH2Q9H0J4 1663 aa12.99□□□□□ -0.33
CHCHD4P3-201ENST00000455954 EVC2Q86UK5 1308 aa12.99□□□□□ -0.33
CHCHD4P3-201ENST00000455954 RBM6P78332 1123 aaKnown RBP12.99□□□□□ -0.33
CHCHD4P3-201ENST00000455954 GSE1Q14687 1217 aa12.99□□□□□ -0.33
CHCHD4P3-201ENST00000455954 FAM161AQ3B820 660 aa12.99□□□□□ -0.33
CHCHD4P3-201ENST00000455954 CABLES1Q8TDN4 633 aa12.99□□□□□ -0.33
CHCHD4P3-201ENST00000455954 POLR3AO14802 1390 aaPredicted RBP12.98□□□□□ -0.33
CHCHD4P3-201ENST00000455954 ACEP12821 1306 aa12.98□□□□□ -0.33
CHCHD4P3-201ENST00000455954 TMF1P82094 1093 aa12.98□□□□□ -0.33
CHCHD4P3-201ENST00000455954 TESK2Q96S53 571 aa12.98□□□□□ -0.33
CHCHD4P3-201ENST00000455954 TRPC5Q9UL62 973 aaPredicted RBP12.98□□□□□ -0.33
CHCHD4P3-201ENST00000455954 LAS1LQ9Y4W2 734 aaKnown RBP12.98□□□□□ -0.33
CHCHD4P3-201ENST00000455954 TRPM3Q9HCF6 1732 aaPredicted RBP12.98□□□□□ -0.33
CHCHD4P3-201ENST00000455954 MARF1Q9Y4F3 1742 aaKnown RBP12.97□□□□□ -0.33
CHCHD4P3-201ENST00000455954 ZNF521Q96K83 1311 aa12.97□□□□□ -0.33
CHCHD4P3-201ENST00000455954 MYOM1P52179 1685 aa12.97□□□□□ -0.33
CHCHD4P3-201ENST00000455954 TOPAZ1Q8N9V7 1692 aa12.97□□□□□ -0.33
CHCHD4P3-201ENST00000455954 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
CHCHD4P3-201ENST00000455954 PRKCSHP14314 528 aaPredicted RBP12.97□□□□□ -0.33
CHCHD4P3-201ENST00000455954 CDK12Q9NYV4 1490 aaPredicted RBP12.97□□□□□ -0.33
CHCHD4P3-201ENST00000455954 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.33
CHCHD4P3-201ENST00000455954 DAXXQ9UER7 740 aaPredicted RBP12.96□□□□□ -0.33
CHCHD4P3-201ENST00000455954 BCL9LQ86UU0 1499 aa12.96□□□□□ -0.34
CHCHD4P3-201ENST00000455954 ALS2Q96Q42 1657 aa12.96□□□□□ -0.34
CHCHD4P3-201ENST00000455954 CDCA8Q53HL2 280 aa12.95□□□□□ -0.34
CHCHD4P3-201ENST00000455954 CABP1Q9NZU7 370 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms