RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 RGPD8O14715 1765 aaPredicted RBP19.74■□□□□ 0.75
HMGXB4-204ENST00000455359 COL16A1Q07092 1604 aaPredicted RBP19.74■□□□□ 0.75
HMGXB4-204ENST00000455359 TTC21BQ7Z4L5 1316 aa19.73■□□□□ 0.75
HMGXB4-204ENST00000455359 PAK3O75914 559 aaPredicted RBP19.73■□□□□ 0.75
HMGXB4-204ENST00000455359 PHLPP1O60346 1717 aa19.71■□□□□ 0.75
HMGXB4-204ENST00000455359 PANK3Q9H999 370 aa19.71■□□□□ 0.75
HMGXB4-204ENST00000455359 SPATA31A6Q5VVP1 1343 aa19.7■□□□□ 0.74
HMGXB4-204ENST00000455359 PNPLA6Q8IY17 1366 aa19.7■□□□□ 0.74
HMGXB4-204ENST00000455359 ABTB2Q8N961 1025 aa19.7■□□□□ 0.74
HMGXB4-204ENST00000455359 ZNF316A6NFI3 1004 aaPredicted RBP19.69■□□□□ 0.74
HMGXB4-204ENST00000455359 CARD14Q9BXL6 1004 aa19.69■□□□□ 0.74
HMGXB4-204ENST00000455359 LMOD2Q6P5Q4 547 aa19.68■□□□□ 0.74
HMGXB4-204ENST00000455359 NLRP13Q86W25 1043 aa19.68■□□□□ 0.74
HMGXB4-204ENST00000455359 USP31Q70CQ4 1352 aa19.67■□□□□ 0.74
HMGXB4-204ENST00000455359 TRPM3Q9HCF6 1732 aaPredicted RBP19.65■□□□□ 0.74
HMGXB4-204ENST00000455359 NLRP6P59044 892 aa19.65■□□□□ 0.74
HMGXB4-204ENST00000455359 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.65■□□□□ 0.74
HMGXB4-204ENST00000455359 CGNL1Q0VF96 1302 aa19.65■□□□□ 0.74
HMGXB4-204ENST00000455359 NSD3Q9BZ95 1437 aa19.65■□□□□ 0.74
HMGXB4-204ENST00000455359 KNSTRNQ9Y448 316 aa19.64■□□□□ 0.73
HMGXB4-204ENST00000455359 MYOM1P52179 1685 aa19.64■□□□□ 0.73
HMGXB4-204ENST00000455359 AKAP12Q02952 1782 aa19.64■□□□□ 0.73
HMGXB4-204ENST00000455359 USP19O94966 1318 aa19.63■□□□□ 0.73
HMGXB4-204ENST00000455359 MON2Q7Z3U7 1717 aa19.62■□□□□ 0.73
HMGXB4-204ENST00000455359 FYB1O15117 783 aa19.62■□□□□ 0.73
HMGXB4-204ENST00000455359 PER1O15534 1290 aaPredicted RBP19.62■□□□□ 0.73
HMGXB4-204ENST00000455359 NME9Q86XW9 330 aa19.62■□□□□ 0.73
HMGXB4-204ENST00000455359 NSD2O96028 1365 aa19.61■□□□□ 0.73
HMGXB4-204ENST00000455359 KCNH5Q8NCM2 988 aa19.61■□□□□ 0.73
HMGXB4-204ENST00000455359 MED1Q15648 1581 aaPredicted RBP19.61■□□□□ 0.73
HMGXB4-204ENST00000455359 NRKQ7Z2Y5 1582 aa19.61■□□□□ 0.73
HMGXB4-204ENST00000455359 COG3Q96JB2 828 aa19.6■□□□□ 0.73
HMGXB4-204ENST00000455359 SHPRHQ149N8 1683 aa19.6■□□□□ 0.73
HMGXB4-204ENST00000455359 ALS2Q96Q42 1657 aa19.6■□□□□ 0.73
HMGXB4-204ENST00000455359 COL22A1Q8NFW1 1626 aaPredicted RBP19.6■□□□□ 0.73
HMGXB4-204ENST00000455359 NPC1L1Q9UHC9 1359 aa19.59■□□□□ 0.73
HMGXB4-204ENST00000455359 HAP1P54257 671 aaPredicted RBP19.58■□□□□ 0.73
HMGXB4-204ENST00000455359 NUTM2GQ5VZR2 741 aa19.58■□□□□ 0.73
HMGXB4-204ENST00000455359 GCP02774 474 aa19.57■□□□□ 0.72
HMGXB4-204ENST00000455359 AMER1Q5JTC6 1135 aaPredicted RBP19.57■□□□□ 0.72
HMGXB4-204ENST00000455359 OVOS2A0A0J9YW53 1432 aa19.57■□□□□ 0.72
HMGXB4-204ENST00000455359 OVOS2Q6IE36 1432 aa19.57■□□□□ 0.72
HMGXB4-204ENST00000455359 CABLES1Q8TDN4 633 aa19.56■□□□□ 0.72
HMGXB4-204ENST00000455359 GGNBP2Q9H3C7 697 aa19.56■□□□□ 0.72
HMGXB4-204ENST00000455359 NUTM2BA6NNL0 878 aaPredicted RBP19.54■□□□□ 0.72
HMGXB4-204ENST00000455359 NUTM2EB1AL46 878 aaPredicted RBP19.54■□□□□ 0.72
HMGXB4-204ENST00000455359 DDX10Q13206 875 aaKnown RBP19.54■□□□□ 0.72
HMGXB4-204ENST00000455359 NUTM2AQ8IVF1 878 aaPredicted RBP19.54■□□□□ 0.72
HMGXB4-204ENST00000455359 ZRANB1Q9UGI0 708 aa19.54■□□□□ 0.72
HMGXB4-204ENST00000455359 CPDO75976 1380 aa19.54■□□□□ 0.72
HMGXB4-204ENST00000455359 PIK3C2AO00443 1686 aa19.54■□□□□ 0.72
HMGXB4-204ENST00000455359 SLIT3O75094 1523 aa19.53■□□□□ 0.72
HMGXB4-204ENST00000455359 MEX3CQ5U5Q3 659 aaKnown RBP19.51■□□□□ 0.71
HMGXB4-204ENST00000455359 USP54Q70EL1 1684 aa19.51■□□□□ 0.71
HMGXB4-204ENST00000455359 ADAMTS2O95450 1211 aa19.51■□□□□ 0.71
HMGXB4-204ENST00000455359 MORC1Q86VD1 984 aa19.5■□□□□ 0.71
HMGXB4-204ENST00000455359 ARHGEF25Q86VW2 580 aa19.5■□□□□ 0.71
HMGXB4-204ENST00000455359 PRDM11Q9NQV5 511 aa19.5■□□□□ 0.71
HMGXB4-204ENST00000455359 LRP6O75581 1613 aa19.49■□□□□ 0.71
HMGXB4-204ENST00000455359 AATKQ6ZMQ8 1374 aa19.49■□□□□ 0.71
HMGXB4-204ENST00000455359 PLEKHG5O94827 1062 aa19.49■□□□□ 0.71
HMGXB4-204ENST00000455359 KIAA0232Q92628 1395 aa19.48■□□□□ 0.71
HMGXB4-204ENST00000455359 ZC3H6P61129 1189 aaKnown RBP19.48■□□□□ 0.71
HMGXB4-204ENST00000455359 FNBP4Q8N3X1 1017 aaPredicted RBP19.48■□□□□ 0.71
HMGXB4-204ENST00000455359 FAM83GA6ND36 823 aa19.47■□□□□ 0.71
HMGXB4-204ENST00000455359 NGLY1Q96IV0 654 aa19.47■□□□□ 0.71
HMGXB4-204ENST00000455359 KIF24Q5T7B8 1368 aa19.46■□□□□ 0.71
HMGXB4-204ENST00000455359 NFAT5O94916 1531 aa19.45■□□□□ 0.7
HMGXB4-204ENST00000455359 CC2D1BQ5T0F9 858 aaKnown RBP19.45■□□□□ 0.7
HMGXB4-204ENST00000455359 C8orf37Q96NL8 207 aa19.45■□□□□ 0.7
HMGXB4-204ENST00000455359 SOX12O15370 315 aa19.44■□□□□ 0.7
HMGXB4-204ENST00000455359 CRYBG1Q9Y4K1 1723 aa19.43■□□□□ 0.7
HMGXB4-204ENST00000455359 MAP3K19Q56UN5 1328 aa19.43■□□□□ 0.7
HMGXB4-204ENST00000455359 PHRF1Q9P1Y6 1649 aaKnown RBP19.43■□□□□ 0.7
HMGXB4-204ENST00000455359 RTL1A6NKG5 1358 aa19.43■□□□□ 0.7
HMGXB4-204ENST00000455359 ABCC6O95255 1503 aa19.42■□□□□ 0.7
HMGXB4-204ENST00000455359 ZNF772Q68DY9 489 aaPredicted RBP19.42■□□□□ 0.7
HMGXB4-204ENST00000455359 ABCA3Q99758 1704 aa19.41■□□□□ 0.7
HMGXB4-204ENST00000455359 RALBP1Q15311 655 aa19.41■□□□□ 0.7
HMGXB4-204ENST00000455359 IP6K1Q92551 441 aa19.41■□□□□ 0.7
HMGXB4-204ENST00000455359 KIF20BQ96Q89 1820 aa19.41■□□□□ 0.7
HMGXB4-204ENST00000455359 SLIT2O94813 1529 aa19.4■□□□□ 0.7
HMGXB4-204ENST00000455359 MARF1Q9Y4F3 1742 aaKnown RBP19.4■□□□□ 0.7
HMGXB4-204ENST00000455359 AMPHP49418 695 aa19.4■□□□□ 0.7
HMGXB4-204ENST00000455359 CHRNA2Q15822 529 aa19.4■□□□□ 0.7
HMGXB4-204ENST00000455359 UNC5CLQ8IV45 518 aa19.4■□□□□ 0.7
HMGXB4-204ENST00000455359 POLKQ9UBT6 870 aa19.4■□□□□ 0.7
HMGXB4-204ENST00000455359 AFF2P51816 1311 aa19.4■□□□□ 0.7
HMGXB4-204ENST00000455359 BTG4Q9NY30 223 aa19.39■□□□□ 0.69
HMGXB4-204ENST00000455359 USP21Q9UK80 565 aa19.39■□□□□ 0.69
HMGXB4-204ENST00000455359 BLMP54132 1417 aaPredicted RBP19.38■□□□□ 0.69
HMGXB4-204ENST00000455359 FLT4P35916 1363 aa19.38■□□□□ 0.69
HMGXB4-204ENST00000455359 PARD3Q8TEW0 1356 aa19.38■□□□□ 0.69
HMGXB4-204ENST00000455359 TNNT2P45379 298 aaPredicted RBP19.38■□□□□ 0.69
HMGXB4-204ENST00000455359 RRS1Q15050 365 aaKnown RBP19.38■□□□□ 0.69
HMGXB4-204ENST00000455359 PHF23Q9BUL5 403 aaPredicted RBP19.38■□□□□ 0.69
HMGXB4-204ENST00000455359 ZBTB7CA1YPR0 619 aa19.37■□□□□ 0.69
HMGXB4-204ENST00000455359 HOXC9P31274 260 aa19.37■□□□□ 0.69
HMGXB4-204ENST00000455359 COL14A1Q05707 1796 aaKnown RBP19.37■□□□□ 0.69
HMGXB4-204ENST00000455359 BCL9LQ86UU0 1499 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms