RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 KIF1AQ12756 1690 aa16.34■□□□□ 0.21
RCL1-208ENST00000448872 TTC21BQ7Z4L5 1316 aa16.34■□□□□ 0.21
RCL1-208ENST00000448872 NSD3Q9BZ95 1437 aa16.33■□□□□ 0.21
RCL1-208ENST00000448872 AHDC1Q5TGY3 1603 aaPredicted RBP16.33■□□□□ 0.2
RCL1-208ENST00000448872 ITSN1Q15811 1721 aa16.33■□□□□ 0.2
RCL1-208ENST00000448872 PLEKHG5O94827 1062 aa16.33■□□□□ 0.2
RCL1-208ENST00000448872 NUTM2GQ5VZR2 741 aa16.33■□□□□ 0.2
RCL1-208ENST00000448872 LMOD2Q6P5Q4 547 aa16.33■□□□□ 0.2
RCL1-208ENST00000448872 ZRANB1Q9UGI0 708 aa16.33■□□□□ 0.2
RCL1-208ENST00000448872 MSH5O43196 834 aa16.32■□□□□ 0.2
RCL1-208ENST00000448872 NME9Q86XW9 330 aa16.32■□□□□ 0.2
RCL1-208ENST00000448872 SPATA31A3Q5VYP0 1347 aa16.32■□□□□ 0.2
RCL1-208ENST00000448872 SBNO1A3KN83 1393 aa16.31■□□□□ 0.2
RCL1-208ENST00000448872 PER1O15534 1290 aaPredicted RBP16.31■□□□□ 0.2
RCL1-208ENST00000448872 EDC4Q6P2E9 1401 aaKnown RBP16.31■□□□□ 0.2
RCL1-208ENST00000448872 NHSL1Q5SYE7 1610 aa16.3■□□□□ 0.2
RCL1-208ENST00000448872 TNS3Q68CZ2 1445 aa16.3■□□□□ 0.2
RCL1-208ENST00000448872 CNGB1Q14028 1251 aaPredicted RBP16.29■□□□□ 0.2
RCL1-208ENST00000448872 ABTB2Q8N961 1025 aa16.29■□□□□ 0.2
RCL1-208ENST00000448872 LRRC59Q96AG4 307 aaKnown RBP16.29■□□□□ 0.2
RCL1-208ENST00000448872 FYB1O15117 783 aa16.29■□□□□ 0.2
RCL1-208ENST00000448872 GGNBP2Q9H3C7 697 aa16.29■□□□□ 0.2
RCL1-208ENST00000448872 COL16A1Q07092 1604 aaPredicted RBP16.28■□□□□ 0.2
RCL1-208ENST00000448872 KNSTRNQ9Y448 316 aa16.28■□□□□ 0.2
RCL1-208ENST00000448872 TTC21AQ8NDW8 1320 aa16.27■□□□□ 0.2
RCL1-208ENST00000448872 AMER1Q5JTC6 1135 aaPredicted RBP16.27■□□□□ 0.19
RCL1-208ENST00000448872 CABLES1Q8TDN4 633 aa16.27■□□□□ 0.19
RCL1-208ENST00000448872 BRD4O60885 1362 aaPredicted RBP16.26■□□□□ 0.19
RCL1-208ENST00000448872 PNPLA6Q8IY17 1366 aa16.26■□□□□ 0.19
RCL1-208ENST00000448872 NRKQ7Z2Y5 1582 aa16.26■□□□□ 0.19
RCL1-208ENST00000448872 NLRP6P59044 892 aa16.26■□□□□ 0.19
RCL1-208ENST00000448872 PHLPP1O60346 1717 aa16.25■□□□□ 0.19
RCL1-208ENST00000448872 TRPM3Q9HCF6 1732 aaPredicted RBP16.25■□□□□ 0.19
RCL1-208ENST00000448872 CGNL1Q0VF96 1302 aa16.25■□□□□ 0.19
RCL1-208ENST00000448872 CC2D1BQ5T0F9 858 aaKnown RBP16.25■□□□□ 0.19
RCL1-208ENST00000448872 AKAP12Q02952 1782 aa16.24■□□□□ 0.19
RCL1-208ENST00000448872 ILDR1Q86SU0 546 aaPredicted RBP16.24■□□□□ 0.19
RCL1-208ENST00000448872 MON2Q7Z3U7 1717 aa16.24■□□□□ 0.19
RCL1-208ENST00000448872 ARHGEF10O15013 1369 aa16.24■□□□□ 0.19
RCL1-208ENST00000448872 SOX12O15370 315 aa16.23■□□□□ 0.19
RCL1-208ENST00000448872 NPM3O75607 178 aaKnown RBP16.23■□□□□ 0.19
RCL1-208ENST00000448872 FBLN1P23142 703 aa16.22■□□□□ 0.19
RCL1-208ENST00000448872 JCADQ9P266 1359 aa16.22■□□□□ 0.19
RCL1-208ENST00000448872 NLRP13Q86W25 1043 aa16.22■□□□□ 0.19
RCL1-208ENST00000448872 COG3Q96JB2 828 aa16.22■□□□□ 0.19
RCL1-208ENST00000448872 USP31Q70CQ4 1352 aa16.22■□□□□ 0.19
RCL1-208ENST00000448872 OVOS2A0A0J9YW53 1432 aa16.21■□□□□ 0.19
RCL1-208ENST00000448872 OVOS2Q6IE36 1432 aa16.21■□□□□ 0.19
RCL1-208ENST00000448872 NUTM2BA6NNL0 878 aaPredicted RBP16.21■□□□□ 0.19
RCL1-208ENST00000448872 NUTM2EB1AL46 878 aaPredicted RBP16.21■□□□□ 0.19
RCL1-208ENST00000448872 NUTM2AQ8IVF1 878 aaPredicted RBP16.21■□□□□ 0.19
RCL1-208ENST00000448872 PIK3C2AO00443 1686 aa16.21■□□□□ 0.18
RCL1-208ENST00000448872 USP19O94966 1318 aa16.2■□□□□ 0.18
RCL1-208ENST00000448872 TNNT2P45379 298 aaPredicted RBP16.2■□□□□ 0.18
RCL1-208ENST00000448872 ALS2Q96Q42 1657 aa16.19■□□□□ 0.18
RCL1-208ENST00000448872 MED1Q15648 1581 aaPredicted RBP16.19■□□□□ 0.18
RCL1-208ENST00000448872 GCP02774 474 aa16.18■□□□□ 0.18
RCL1-208ENST00000448872 MORC1Q86VD1 984 aa16.17■□□□□ 0.18
RCL1-208ENST00000448872 NSD2O96028 1365 aa16.17■□□□□ 0.18
RCL1-208ENST00000448872 ADAMTS2O95450 1211 aa16.16■□□□□ 0.18
RCL1-208ENST00000448872 HAP1P54257 671 aaPredicted RBP16.16■□□□□ 0.18
RCL1-208ENST00000448872 ZC3H6P61129 1189 aaKnown RBP16.16■□□□□ 0.18
RCL1-208ENST00000448872 NPC1L1Q9UHC9 1359 aa16.16■□□□□ 0.18
RCL1-208ENST00000448872 ZBTB7CA1YPR0 619 aa16.15■□□□□ 0.18
RCL1-208ENST00000448872 RRS1Q15050 365 aaKnown RBP16.15■□□□□ 0.18
RCL1-208ENST00000448872 SLIT3O75094 1523 aa16.15■□□□□ 0.18
RCL1-208ENST00000448872 SPATA31A6Q5VVP1 1343 aa16.15■□□□□ 0.18
RCL1-208ENST00000448872 LRP6O75581 1613 aa16.14■□□□□ 0.17
RCL1-208ENST00000448872 CNKSR2Q8WXI2 1034 aa16.14■□□□□ 0.17
RCL1-208ENST00000448872 COL22A1Q8NFW1 1626 aaPredicted RBP16.14■□□□□ 0.17
RCL1-208ENST00000448872 CHRNA2Q15822 529 aa16.13■□□□□ 0.17
RCL1-208ENST00000448872 KCNH5Q8NCM2 988 aa16.13■□□□□ 0.17
RCL1-208ENST00000448872 KIAA0232Q92628 1395 aa16.13■□□□□ 0.17
RCL1-208ENST00000448872 NFAT5O94916 1531 aa16.12■□□□□ 0.17
RCL1-208ENST00000448872 SHPRHQ149N8 1683 aa16.11■□□□□ 0.17
RCL1-208ENST00000448872 MARF1Q9Y4F3 1742 aaKnown RBP16.11■□□□□ 0.17
RCL1-208ENST00000448872 FAM83GA6ND36 823 aa16.11■□□□□ 0.17
RCL1-208ENST00000448872 ARHGEF25Q86VW2 580 aa16.11■□□□□ 0.17
RCL1-208ENST00000448872 EMILIN1Q9Y6C2 1016 aa16.11■□□□□ 0.17
RCL1-208ENST00000448872 MAP3K19Q56UN5 1328 aa16.11■□□□□ 0.17
RCL1-208ENST00000448872 PARD3Q8TEW0 1356 aa16.11■□□□□ 0.17
RCL1-208ENST00000448872 POLKQ9UBT6 870 aa16.1■□□□□ 0.17
RCL1-208ENST00000448872 DIEXFQ68CQ4 756 aaKnown RBP16.1■□□□□ 0.17
RCL1-208ENST00000448872 PRKRIP1Q9H875 184 aaPredicted RBP16.1■□□□□ 0.17
RCL1-208ENST00000448872 PRDM11Q9NQV5 511 aa16.1■□□□□ 0.17
RCL1-208ENST00000448872 KIF20BQ96Q89 1820 aa16.09■□□□□ 0.17
RCL1-208ENST00000448872 CPDO75976 1380 aa16.09■□□□□ 0.17
RCL1-208ENST00000448872 AATKQ6ZMQ8 1374 aa16.09■□□□□ 0.17
RCL1-208ENST00000448872 PPM1GO15355 546 aaPredicted RBP16.09■□□□□ 0.17
RCL1-208ENST00000448872 PPP2R1AP30153 589 aa16.09■□□□□ 0.17
RCL1-208ENST00000448872 C8orf37Q96NL8 207 aa16.09■□□□□ 0.17
RCL1-208ENST00000448872 CRYBG1Q9Y4K1 1723 aa16.08■□□□□ 0.16
RCL1-208ENST00000448872 USP54Q70EL1 1684 aa16.08■□□□□ 0.16
RCL1-208ENST00000448872 PHRF1Q9P1Y6 1649 aaKnown RBP16.08■□□□□ 0.16
RCL1-208ENST00000448872 MEX3CQ5U5Q3 659 aaKnown RBP16.08■□□□□ 0.16
RCL1-208ENST00000448872 AXIN2Q9Y2T1 843 aa16.08■□□□□ 0.16
RCL1-208ENST00000448872 RALBP1Q15311 655 aa16.07■□□□□ 0.16
RCL1-208ENST00000448872 ANP32CO43423 234 aa16.06■□□□□ 0.16
RCL1-208ENST00000448872 MTHFSP49914 203 aa16.06■□□□□ 0.16
RCL1-208ENST00000448872 ABCA3Q99758 1704 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms