RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 GOLGA2Q08379 1002 aa23.38■■□□□ 1.33
LMNA-208ENST00000448611 ZNF692Q9BU19 519 aaPredicted RBP23.38■■□□□ 1.33
LMNA-208ENST00000448611 STRCQ7RTU9 1775 aa23.38■■□□□ 1.33
LMNA-208ENST00000448611 PNPLA6Q8IY17 1366 aa23.38■■□□□ 1.33
LMNA-208ENST00000448611 PLEKHG3A1L390 1219 aa23.37■■□□□ 1.33
LMNA-208ENST00000448611 RUNDC1Q96C34 613 aa23.37■■□□□ 1.33
LMNA-208ENST00000448611 IQSEC2Q5JU85 1478 aa23.37■■□□□ 1.33
LMNA-208ENST00000448611 PELP1Q8IZL8 1130 aaKnown RBP23.37■■□□□ 1.33
LMNA-208ENST00000448611 PPP4R2Q9NY27 417 aa23.37■■□□□ 1.33
LMNA-208ENST00000448611 KCNA6P17658 529 aa23.35■■□□□ 1.33
LMNA-208ENST00000448611 DUSP27Q5VZP5 1158 aa23.35■■□□□ 1.33
LMNA-208ENST00000448611 NME9Q86XW9 330 aa23.35■■□□□ 1.33
LMNA-208ENST00000448611 NKTRP30414 1462 aaKnown RBP23.35■■□□□ 1.33
LMNA-208ENST00000448611 NRKQ7Z2Y5 1582 aa23.33■■□□□ 1.33
LMNA-208ENST00000448611 RRP1P56182 461 aaKnown RBP23.33■■□□□ 1.33
LMNA-208ENST00000448611 SLFN5Q08AF3 891 aa23.33■■□□□ 1.33
LMNA-208ENST00000448611 TRMT2AQ8IZ69 625 aaKnown RBP23.33■■□□□ 1.32
LMNA-208ENST00000448611 NUTM2FA1L443 756 aa23.32■■□□□ 1.32
LMNA-208ENST00000448611 U2AF1L5P0DN76 240 aaPredicted RBP23.32■■□□□ 1.32
LMNA-208ENST00000448611 U2AF1Q01081 240 aaKnown RBP eCLIP23.32■■□□□ 1.32
LMNA-208ENST00000448611 ACEP12821 1306 aa23.32■■□□□ 1.32
LMNA-208ENST00000448611 POLKQ9UBT6 870 aa23.31■■□□□ 1.32
LMNA-208ENST00000448611 CHD2O14647 1828 aaKnown RBP23.31■■□□□ 1.32
LMNA-208ENST00000448611 ZRANB1Q9UGI0 708 aa23.31■■□□□ 1.32
LMNA-208ENST00000448611 AATKQ6ZMQ8 1374 aa23.3■■□□□ 1.32
LMNA-208ENST00000448611 TCP11L2Q8N4U5 519 aa23.3■■□□□ 1.32
LMNA-208ENST00000448611 USP6P35125 1406 aa23.3■■□□□ 1.32
LMNA-208ENST00000448611 WWC1Q8IX03 1113 aa23.29■■□□□ 1.32
LMNA-208ENST00000448611 PHF23Q9BUL5 403 aaPredicted RBP23.29■■□□□ 1.32
LMNA-208ENST00000448611 SPINK5Q9NQ38 1064 aaPredicted RBP23.29■■□□□ 1.32
LMNA-208ENST00000448611 DIAPH1O60610 1272 aaKnown RBP23.28■■□□□ 1.32
LMNA-208ENST00000448611 FBLN1P23142 703 aa23.28■■□□□ 1.32
LMNA-208ENST00000448611 COG3Q96JB2 828 aa23.28■■□□□ 1.32
LMNA-208ENST00000448611 DMRT2Q9Y5R5 561 aa23.28■■□□□ 1.32
LMNA-208ENST00000448611 TTC21BQ7Z4L5 1316 aa23.28■■□□□ 1.32
LMNA-208ENST00000448611 NCBP3Q53F19 620 aaKnown RBP23.27■■□□□ 1.32
LMNA-208ENST00000448611 SSH2Q76I76 1423 aa23.27■■□□□ 1.32
LMNA-208ENST00000448611 MAP2P11137 1827 aaKnown RBP23.27■■□□□ 1.32
LMNA-208ENST00000448611 E9PSI1 815 aa23.26■■□□□ 1.31
LMNA-208ENST00000448611 ANKARQ7Z5J8 1434 aa23.26■■□□□ 1.31
LMNA-208ENST00000448611 U2SURPO15042 1029 aaKnown RBP23.25■■□□□ 1.31
LMNA-208ENST00000448611 PLEKHF1Q96S99 279 aa23.25■■□□□ 1.31
LMNA-208ENST00000448611 CCDC27Q2M243 656 aa23.25■■□□□ 1.31
LMNA-208ENST00000448611 RRP7AQ9Y3A4 280 aaKnown RBP23.25■■□□□ 1.31
LMNA-208ENST00000448611 FMN2Q9NZ56 1722 aa23.24■■□□□ 1.31
LMNA-208ENST00000448611 CDK12Q9NYV4 1490 aaPredicted RBP23.24■■□□□ 1.31
LMNA-208ENST00000448611 RGPD8O14715 1765 aaPredicted RBP23.24■■□□□ 1.31
LMNA-208ENST00000448611 EMILIN1Q9Y6C2 1016 aa23.23■■□□□ 1.31
LMNA-208ENST00000448611 OVOS2A0A0J9YW53 1432 aa23.22■■□□□ 1.31
LMNA-208ENST00000448611 OVOS2Q6IE36 1432 aa23.22■■□□□ 1.31
LMNA-208ENST00000448611 PPM1GO15355 546 aaPredicted RBP23.22■■□□□ 1.31
LMNA-208ENST00000448611 NEUROD2Q15784 382 aa23.22■■□□□ 1.31
LMNA-208ENST00000448611 NALCNQ8IZF0 1738 aa23.21■■□□□ 1.31
LMNA-208ENST00000448611 PMFBP1Q8TBY8 1022 aa23.21■■□□□ 1.31
LMNA-208ENST00000448611 B4GALNT3Q6L9W6 998 aa23.2■■□□□ 1.3
LMNA-208ENST00000448611 WDR63Q8IWG1 891 aa23.2■■□□□ 1.3
LMNA-208ENST00000448611 TTC21AQ8NDW8 1320 aa23.19■■□□□ 1.3
LMNA-208ENST00000448611 FCHSD2O94868 740 aa23.17■■□□□ 1.3
LMNA-208ENST00000448611 IL13P35225 146 aa23.17■■□□□ 1.3
LMNA-208ENST00000448611 RRS1Q15050 365 aaKnown RBP23.17■■□□□ 1.3
LMNA-208ENST00000448611 NGDNQ8NEJ9 315 aaKnown RBP23.17■■□□□ 1.3
LMNA-208ENST00000448611 USP31Q70CQ4 1352 aa23.17■■□□□ 1.3
LMNA-208ENST00000448611 PNNQ9H307 717 aaKnown RBP23.16■■□□□ 1.3
LMNA-208ENST00000448611 LRRC7Q96NW7 1537 aa23.16■■□□□ 1.3
LMNA-208ENST00000448611 PLIN1O60240 522 aa23.16■■□□□ 1.3
LMNA-208ENST00000448611 MAPK8IP3Q9UPT6 1336 aa23.15■■□□□ 1.3
LMNA-208ENST00000448611 TMPOP42166 694 aaKnown RBP23.15■■□□□ 1.3
LMNA-208ENST00000448611 ZNF335Q9H4Z2 1342 aaPredicted RBP23.15■■□□□ 1.3
LMNA-208ENST00000448611 ADGRL3Q9HAR2 1447 aa23.15■■□□□ 1.3
LMNA-208ENST00000448611 RSPH6AQ9H0K4 717 aa23.14■■□□□ 1.3
LMNA-208ENST00000448611 NWD1Q149M9 1564 aa23.14■■□□□ 1.3
LMNA-208ENST00000448611 EXOC6Q8TAG9 804 aa23.14■■□□□ 1.29
LMNA-208ENST00000448611 RBM33Q96EV2 1170 aaKnown RBP23.12■■□□□ 1.29
LMNA-208ENST00000448611 TRIM35Q9UPQ4 493 aa23.11■■□□□ 1.29
LMNA-208ENST00000448611 PIK3C2AO00443 1686 aa23.1■■□□□ 1.29
LMNA-208ENST00000448611 PRKAR2BP31323 418 aa23.1■■□□□ 1.29
LMNA-208ENST00000448611 CCDC136Q96JN2 1154 aa23.1■■□□□ 1.29
LMNA-208ENST00000448611 TSHZ2Q9NRE2 1034 aa23.1■■□□□ 1.29
LMNA-208ENST00000448611 STRCP1A6NGW2 1772 aa23.09■■□□□ 1.29
LMNA-208ENST00000448611 PROSER2Q86WR7 435 aaPredicted RBP23.08■■□□□ 1.28
LMNA-208ENST00000448611 PEAK1Q9H792 1746 aa23.07■■□□□ 1.28
LMNA-208ENST00000448611 HMOX1P09601 288 aa23.06■■□□□ 1.28
LMNA-208ENST00000448611 RIPK4P57078 832 aa23.06■■□□□ 1.28
LMNA-208ENST00000448611 C20orf194Q5TEA3 1177 aa23.06■■□□□ 1.28
LMNA-208ENST00000448611 MYH16Q9H6N6 1097 aa23.06■■□□□ 1.28
LMNA-208ENST00000448611 PHF8Q9UPP1 1060 aa23.06■■□□□ 1.28
LMNA-208ENST00000448611 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.06■■□□□ 1.28
LMNA-208ENST00000448611 USP54Q70EL1 1684 aa23.05■■□□□ 1.28
LMNA-208ENST00000448611 CRBNQ96SW2 442 aa23.04■■□□□ 1.28
LMNA-208ENST00000448611 BCAR3O75815 825 aa23.04■■□□□ 1.28
LMNA-208ENST00000448611 EIF4A2Q14240 407 aaKnown RBP23.04■■□□□ 1.28
LMNA-208ENST00000448611 PHACTR3Q96KR7 559 aa23.04■■□□□ 1.28
LMNA-208ENST00000448611 IL16Q14005 1332 aa23.03■■□□□ 1.28
LMNA-208ENST00000448611 NEFMP07197 916 aa23.03■■□□□ 1.28
LMNA-208ENST00000448611 C14orf37Q86TY3 774 aa23.03■■□□□ 1.28
LMNA-208ENST00000448611 MARF1Q9Y4F3 1742 aaKnown RBP23.03■■□□□ 1.28
LMNA-208ENST00000448611 MAP3K19Q56UN5 1328 aa23.02■■□□□ 1.28
LMNA-208ENST00000448611 NFE2L2Q16236 605 aa23.01■■□□□ 1.27
LMNA-208ENST00000448611 TMEM94Q12767 1356 aa23.01■■□□□ 1.27
LMNA-208ENST00000448611 SOX12O15370 315 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms