RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 SSFA2P28290 1259 aa25.61■■□□□ 1.69
SMARCD2-203ENST00000448276 NUTM2DQ5VT03 806 aaPredicted RBP25.61■■□□□ 1.69
SMARCD2-203ENST00000448276 C1orf115Q9H7X2 142 aa25.6■■□□□ 1.69
SMARCD2-203ENST00000448276 CD109Q6YHK3 1445 aa25.6■■□□□ 1.69
SMARCD2-203ENST00000448276 SAFB2Q14151 953 aaKnown RBP eCLIP25.6■■□□□ 1.69
SMARCD2-203ENST00000448276 CHD1LQ86WJ1 897 aa25.6■■□□□ 1.69
SMARCD2-203ENST00000448276 TET3O43151 1660 aa25.6■■□□□ 1.69
SMARCD2-203ENST00000448276 MYOM2P54296 1465 aa25.59■■□□□ 1.69
SMARCD2-203ENST00000448276 SBNO2Q9Y2G9 1366 aa25.58■■□□□ 1.69
SMARCD2-203ENST00000448276 ABCA9Q8IUA7 1624 aa25.58■■□□□ 1.68
SMARCD2-203ENST00000448276 ANKRD45Q5TZF3 282 aa25.57■■□□□ 1.68
SMARCD2-203ENST00000448276 PLEKHF1Q96S99 279 aa25.57■■□□□ 1.68
SMARCD2-203ENST00000448276 CABP2Q9NPB3 220 aa25.57■■□□□ 1.68
SMARCD2-203ENST00000448276 ISY1Q9ULR0 285 aaKnown RBP25.57■■□□□ 1.68
SMARCD2-203ENST00000448276 GAS2L2Q8NHY3 880 aa25.56■■□□□ 1.68
SMARCD2-203ENST00000448276 GGNBP2Q9H3C7 697 aa25.55■■□□□ 1.68
SMARCD2-203ENST00000448276 RIPK4P57078 832 aa25.54■■□□□ 1.68
SMARCD2-203ENST00000448276 CIZ1Q9ULV3 898 aaPredicted RBP25.54■■□□□ 1.68
SMARCD2-203ENST00000448276 MROH2AA6NES4 1674 aa25.54■■□□□ 1.68
SMARCD2-203ENST00000448276 CT47B1P0C2W7 299 aaPredicted RBP25.54■■□□□ 1.68
SMARCD2-203ENST00000448276 TBC1D9Q6ZT07 1266 aa25.52■■□□□ 1.68
SMARCD2-203ENST00000448276 INO80Q9ULG1 1556 aaPredicted RBP25.52■■□□□ 1.68
SMARCD2-203ENST00000448276 K7ELQ4 463 aaPredicted RBP25.52■■□□□ 1.68
SMARCD2-203ENST00000448276 NASPP49321 788 aaPredicted RBP25.52■■□□□ 1.68
SMARCD2-203ENST00000448276 SKOR2Q2VWA4 1001 aaPredicted RBP25.52■■□□□ 1.68
SMARCD2-203ENST00000448276 KIAA1211Q6ZU35 1233 aa25.52■■□□□ 1.68
SMARCD2-203ENST00000448276 DEPDC5O75140 1603 aa25.52■■□□□ 1.68
SMARCD2-203ENST00000448276 MYO3AQ8NEV4 1616 aa25.51■■□□□ 1.67
SMARCD2-203ENST00000448276 BMP2KLQ5H9B9 411 aa25.5■■□□□ 1.67
SMARCD2-203ENST00000448276 C14orf93Q9H972 538 aaKnown RBP25.5■■□□□ 1.67
SMARCD2-203ENST00000448276 DDX49Q9Y6V7 483 aaKnown RBP25.5■■□□□ 1.67
SMARCD2-203ENST00000448276 GGT6Q6P531 493 aa25.5■■□□□ 1.67
SMARCD2-203ENST00000448276 ADGRB2O60241 1585 aa25.49■■□□□ 1.67
SMARCD2-203ENST00000448276 QRICH2Q9H0J4 1663 aa25.49■■□□□ 1.67
SMARCD2-203ENST00000448276 KIF1BO60333 1816 aa25.48■■□□□ 1.67
SMARCD2-203ENST00000448276 IPO8O15397 1037 aaKnown RBP25.47■■□□□ 1.67
SMARCD2-203ENST00000448276 NCLP19338 710 aaKnown RBP25.47■■□□□ 1.67
SMARCD2-203ENST00000448276 VWDEQ8N2E2 1590 aa25.47■■□□□ 1.67
SMARCD2-203ENST00000448276 NRXN1Q9ULB1 1477 aa25.47■■□□□ 1.67
SMARCD2-203ENST00000448276 BAG4O95429 457 aaKnown RBP25.46■■□□□ 1.67
SMARCD2-203ENST00000448276 CCDC173Q0VFZ6 552 aa25.46■■□□□ 1.67
SMARCD2-203ENST00000448276 KIF16BQ96L93 1317 aa25.46■■□□□ 1.67
SMARCD2-203ENST00000448276 PPIP5K1Q6PFW1 1433 aa25.45■■□□□ 1.66
SMARCD2-203ENST00000448276 ELL2O00472 640 aaPredicted RBP25.44■■□□□ 1.66
SMARCD2-203ENST00000448276 RBM10P98175 930 aaKnown RBP25.44■■□□□ 1.66
SMARCD2-203ENST00000448276 IFT172Q9UG01 1749 aa25.44■■□□□ 1.66
SMARCD2-203ENST00000448276 TPM2P07951 284 aa25.43■■□□□ 1.66
SMARCD2-203ENST00000448276 MCTP1Q6DN14 999 aa25.43■■□□□ 1.66
SMARCD2-203ENST00000448276 PPP1R9BQ96SB3 815 aa25.43■■□□□ 1.66
SMARCD2-203ENST00000448276 ANKRD36BQ8N2N9 1353 aa25.43■■□□□ 1.66
SMARCD2-203ENST00000448276 AK9Q5TCS8 1911 aa25.43■■□□□ 1.66
SMARCD2-203ENST00000448276 CFAP65Q6ZU64 1925 aaKnown RBP25.43■■□□□ 1.66
SMARCD2-203ENST00000448276 NCBP3Q53F19 620 aaKnown RBP25.43■■□□□ 1.66
SMARCD2-203ENST00000448276 THUMPD2Q9BTF0 503 aaKnown RBP25.43■■□□□ 1.66
SMARCD2-203ENST00000448276 EVC2Q86UK5 1308 aa25.43■■□□□ 1.66
SMARCD2-203ENST00000448276 ZBTB7BO15156 539 aaPredicted RBP25.43■■□□□ 1.66
SMARCD2-203ENST00000448276 ZSCAN30Q86W11 494 aa25.43■■□□□ 1.66
SMARCD2-203ENST00000448276 ABCC11Q96J66 1382 aa25.42■■□□□ 1.66
SMARCD2-203ENST00000448276 PKP1Q13835 747 aa25.42■■□□□ 1.66
SMARCD2-203ENST00000448276 SIRT2Q8IXJ6 389 aa25.42■■□□□ 1.66
SMARCD2-203ENST00000448276 FBLN1P23142 703 aa25.42■■□□□ 1.66
SMARCD2-203ENST00000448276 MROH1Q8NDA8 1641 aa25.41■■□□□ 1.66
SMARCD2-203ENST00000448276 GOLGA6L22H0YM25 854 aa25.41■■□□□ 1.66
SMARCD2-203ENST00000448276 CAVIN1Q6NZI2 390 aaKnown RBP25.41■■□□□ 1.66
SMARCD2-203ENST00000448276 KLHL40Q2TBA0 621 aa25.4■■□□□ 1.66
SMARCD2-203ENST00000448276 STK26Q9P289 416 aa25.4■■□□□ 1.66
SMARCD2-203ENST00000448276 KIDINS220Q9ULH0 1771 aa25.4■■□□□ 1.66
SMARCD2-203ENST00000448276 ZC3H13Q5T200 1668 aaKnown RBP25.4■■□□□ 1.66
SMARCD2-203ENST00000448276 ADGRB1O14514 1584 aa25.39■■□□□ 1.66
SMARCD2-203ENST00000448276 RAPGEF3O95398 923 aa25.39■■□□□ 1.66
SMARCD2-203ENST00000448276 TSPYL6Q8N831 410 aa25.39■■□□□ 1.65
SMARCD2-203ENST00000448276 ANP32BQ92688 251 aaKnown RBP25.39■■□□□ 1.65
SMARCD2-203ENST00000448276 CHAMP1Q96JM3 812 aa25.39■■□□□ 1.65
SMARCD2-203ENST00000448276 A0A1W2PP64 1363 aa25.39■■□□□ 1.65
SMARCD2-203ENST00000448276 NEURL4Q96JN8 1562 aa25.39■■□□□ 1.65
SMARCD2-203ENST00000448276 MSNP26038 577 aaKnown RBP25.38■■□□□ 1.65
SMARCD2-203ENST00000448276 SRPK2P78362 688 aaKnown RBP25.38■■□□□ 1.65
SMARCD2-203ENST00000448276 TULP4Q9NRJ4 1543 aa25.37■■□□□ 1.65
SMARCD2-203ENST00000448276 USP32Q8NFA0 1604 aa25.37■■□□□ 1.65
SMARCD2-203ENST00000448276 IL16Q14005 1332 aa25.37■■□□□ 1.65
SMARCD2-203ENST00000448276 CFAP74Q9C0B2 1584 aa25.37■■□□□ 1.65
SMARCD2-203ENST00000448276 PTMSP20962 102 aa25.37■■□□□ 1.65
SMARCD2-203ENST00000448276 SETBP1Q9Y6X0 1596 aa25.37■■□□□ 1.65
SMARCD2-203ENST00000448276 EFCAB6Q5THR3 1501 aa25.36■■□□□ 1.65
SMARCD2-203ENST00000448276 GSPT1P15170 499 aaKnown RBP25.36■■□□□ 1.65
SMARCD2-203ENST00000448276 PPRC1Q5VV67 1664 aaKnown RBP25.36■■□□□ 1.65
SMARCD2-203ENST00000448276 OFD1O75665 1012 aa25.36■■□□□ 1.65
SMARCD2-203ENST00000448276 ATAD2Q6PL18 1390 aa25.36■■□□□ 1.65
SMARCD2-203ENST00000448276 ALDH1L2Q3SY69 923 aa25.36■■□□□ 1.65
SMARCD2-203ENST00000448276 GCC1Q96CN9 775 aa25.36■■□□□ 1.65
SMARCD2-203ENST00000448276 RBSNQ9H1K0 784 aa25.36■■□□□ 1.65
SMARCD2-203ENST00000448276 NSD2O96028 1365 aa25.35■■□□□ 1.65
SMARCD2-203ENST00000448276 FYB1O15117 783 aa25.35■■□□□ 1.65
SMARCD2-203ENST00000448276 RBM27Q9P2N5 1060 aaKnown RBP25.35■■□□□ 1.65
SMARCD2-203ENST00000448276 R3HCC1Q9Y3T6 440 aaKnown RBP25.35■■□□□ 1.65
SMARCD2-203ENST00000448276 DIAPH1O60610 1272 aaKnown RBP25.35■■□□□ 1.65
SMARCD2-203ENST00000448276 ZSCAN23Q3MJ62 389 aa25.35■■□□□ 1.65
SMARCD2-203ENST00000448276 C16orf71Q8IYS4 520 aaPredicted RBP25.34■■□□□ 1.65
SMARCD2-203ENST00000448276 PDCL3Q9H2J4 239 aa25.34■■□□□ 1.65
SMARCD2-203ENST00000448276 CDC45O75419 566 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms