RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 RGPD8O14715 1765 aaPredicted RBP17.12■□□□□ 0.33
LTBR-204ENST00000444814 NINLQ9Y2I6 1382 aa17.12■□□□□ 0.33
LTBR-204ENST00000444814 ZNF772Q68DY9 489 aaPredicted RBP17.11■□□□□ 0.33
LTBR-204ENST00000444814 CABP1Q9NZU7 370 aa17.11■□□□□ 0.33
LTBR-204ENST00000444814 HDGFL2Q7Z4V5 671 aaPredicted RBP17.11■□□□□ 0.33
LTBR-204ENST00000444814 TOPAZ1Q8N9V7 1692 aa17.1■□□□□ 0.33
LTBR-204ENST00000444814 TERF2IPQ9NYB0 399 aa17.1■□□□□ 0.33
LTBR-204ENST00000444814 TMC1Q8TDI8 760 aa17.09■□□□□ 0.33
LTBR-204ENST00000444814 COL22A1Q8NFW1 1626 aaPredicted RBP17.09■□□□□ 0.33
LTBR-204ENST00000444814 TESK2Q96S53 571 aa17.08■□□□□ 0.32
LTBR-204ENST00000444814 ADAMTS2O95450 1211 aa17.06■□□□□ 0.32
LTBR-204ENST00000444814 NGLY1Q96IV0 654 aa17.06■□□□□ 0.32
LTBR-204ENST00000444814 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
LTBR-204ENST00000444814 ABTB2Q8N961 1025 aa17.06■□□□□ 0.32
LTBR-204ENST00000444814 C8orf37Q96NL8 207 aa17.06■□□□□ 0.32
LTBR-204ENST00000444814 RTN4Q9NQC3 1192 aaKnown RBP17.06■□□□□ 0.32
LTBR-204ENST00000444814 LRP6O75581 1613 aa17.05■□□□□ 0.32
LTBR-204ENST00000444814 TTC21AQ8NDW8 1320 aa17.04■□□□□ 0.32
LTBR-204ENST00000444814 USP6P35125 1406 aa17.04■□□□□ 0.32
LTBR-204ENST00000444814 KTN1Q86UP2 1357 aaKnown RBP17.04■□□□□ 0.32
LTBR-204ENST00000444814 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
LTBR-204ENST00000444814 TRPM3Q9HCF6 1732 aaPredicted RBP17.02■□□□□ 0.31
LTBR-204ENST00000444814 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.31
LTBR-204ENST00000444814 AFF2P51816 1311 aa17.01■□□□□ 0.31
LTBR-204ENST00000444814 HSPA5P11021 654 aaKnown RBP17■□□□□ 0.31
LTBR-204ENST00000444814 CPSF1Q10570 1443 aaKnown RBP17■□□□□ 0.31
LTBR-204ENST00000444814 PLEKHG5O94827 1062 aa16.99■□□□□ 0.31
LTBR-204ENST00000444814 NLRP6P59044 892 aa16.99■□□□□ 0.31
LTBR-204ENST00000444814 SLC12A5Q9H2X9 1139 aa16.99■□□□□ 0.31
LTBR-204ENST00000444814 USP21Q9UK80 565 aa16.99■□□□□ 0.31
LTBR-204ENST00000444814 ALS2Q96Q42 1657 aa16.99■□□□□ 0.31
LTBR-204ENST00000444814 TTC21BQ7Z4L5 1316 aa16.98■□□□□ 0.31
LTBR-204ENST00000444814 EDC4Q6P2E9 1401 aaKnown RBP16.98■□□□□ 0.31
LTBR-204ENST00000444814 FNBP4Q8N3X1 1017 aaPredicted RBP16.98■□□□□ 0.31
LTBR-204ENST00000444814 KCNH5Q8NCM2 988 aa16.98■□□□□ 0.31
LTBR-204ENST00000444814 CABLES1Q8TDN4 633 aa16.98■□□□□ 0.31
LTBR-204ENST00000444814 PRDM11Q9NQV5 511 aa16.97■□□□□ 0.31
LTBR-204ENST00000444814 TRPC5Q9UL62 973 aaPredicted RBP16.97■□□□□ 0.31
LTBR-204ENST00000444814 ANKRD36BQ8N2N9 1353 aa16.96■□□□□ 0.31
LTBR-204ENST00000444814 RXRBP28702 533 aa16.95■□□□□ 0.3
LTBR-204ENST00000444814 NUTM2GQ5VZR2 741 aa16.95■□□□□ 0.3
LTBR-204ENST00000444814 POLR3GLQ9BT43 218 aa16.95■□□□□ 0.3
LTBR-204ENST00000444814 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
LTBR-204ENST00000444814 QTRT2Q9H974 415 aaKnown RBP16.94■□□□□ 0.3
LTBR-204ENST00000444814 USP19O94966 1318 aa16.94■□□□□ 0.3
LTBR-204ENST00000444814 SSH2Q76I76 1423 aa16.94■□□□□ 0.3
LTBR-204ENST00000444814 AKAP12Q02952 1782 aa16.94■□□□□ 0.3
LTBR-204ENST00000444814 HOXD11P31277 338 aaPredicted RBP16.94■□□□□ 0.3
LTBR-204ENST00000444814 UNC5CLQ8IV45 518 aa16.94■□□□□ 0.3
LTBR-204ENST00000444814 RGS17Q9UGC6 210 aaPredicted RBP16.94■□□□□ 0.3
LTBR-204ENST00000444814 A0A1W2PP64 1363 aa16.93■□□□□ 0.3
LTBR-204ENST00000444814 RBM6P78332 1123 aaKnown RBP16.93■□□□□ 0.3
LTBR-204ENST00000444814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.93■□□□□ 0.3
LTBR-204ENST00000444814 MARF1Q9Y4F3 1742 aaKnown RBP16.92■□□□□ 0.3
LTBR-204ENST00000444814 GCP02774 474 aa16.92■□□□□ 0.3
LTBR-204ENST00000444814 ERICH6Q7L0X2 663 aa16.92■□□□□ 0.3
LTBR-204ENST00000444814 MON2Q7Z3U7 1717 aa16.91■□□□□ 0.3
LTBR-204ENST00000444814 CPDO75976 1380 aa16.9■□□□□ 0.3
LTBR-204ENST00000444814 POTEAQ6S8J7 498 aa16.9■□□□□ 0.3
LTBR-204ENST00000444814 COG3Q96JB2 828 aa16.9■□□□□ 0.3
LTBR-204ENST00000444814 CD163L1Q9NR16 1453 aa16.9■□□□□ 0.3
LTBR-204ENST00000444814 ABCA3Q99758 1704 aa16.9■□□□□ 0.3
LTBR-204ENST00000444814 USP31Q70CQ4 1352 aa16.9■□□□□ 0.3
LTBR-204ENST00000444814 ZC3H6P61129 1189 aaKnown RBP16.89■□□□□ 0.3
LTBR-204ENST00000444814 AMER1Q5JTC6 1135 aaPredicted RBP16.89■□□□□ 0.3
LTBR-204ENST00000444814 CCDC9Q9Y3X0 531 aaKnown RBP16.89■□□□□ 0.3
LTBR-204ENST00000444814 SLIT2O94813 1529 aa16.89■□□□□ 0.29
LTBR-204ENST00000444814 KIAA0232Q92628 1395 aa16.89■□□□□ 0.29
LTBR-204ENST00000444814 FAM83GA6ND36 823 aa16.89■□□□□ 0.29
LTBR-204ENST00000444814 COL14A1Q05707 1796 aaKnown RBP16.89■□□□□ 0.29
LTBR-204ENST00000444814 NRKQ7Z2Y5 1582 aa16.88■□□□□ 0.29
LTBR-204ENST00000444814 EVA1CP58658 441 aa16.88■□□□□ 0.29
LTBR-204ENST00000444814 BTG4Q9NY30 223 aa16.88■□□□□ 0.29
LTBR-204ENST00000444814 PHRF1Q9P1Y6 1649 aaKnown RBP16.88■□□□□ 0.29
LTBR-204ENST00000444814 CDK12Q9NYV4 1490 aaPredicted RBP16.87■□□□□ 0.29
LTBR-204ENST00000444814 ATRNO75882 1429 aa16.87■□□□□ 0.29
LTBR-204ENST00000444814 NWD2Q9ULI1 1742 aa16.87■□□□□ 0.29
LTBR-204ENST00000444814 SLIT3O75094 1523 aa16.87■□□□□ 0.29
LTBR-204ENST00000444814 VPS72Q15906 364 aa16.86■□□□□ 0.29
LTBR-204ENST00000444814 NME9Q86XW9 330 aa16.86■□□□□ 0.29
LTBR-204ENST00000444814 BCL9LQ86UU0 1499 aa16.86■□□□□ 0.29
LTBR-204ENST00000444814 CGNL1Q0VF96 1302 aa16.86■□□□□ 0.29
LTBR-204ENST00000444814 ZBTB7CA1YPR0 619 aa16.85■□□□□ 0.29
LTBR-204ENST00000444814 GJD4Q96KN9 370 aaPredicted RBP16.85■□□□□ 0.29
LTBR-204ENST00000444814 PIK3C2AO00443 1686 aa16.85■□□□□ 0.29
LTBR-204ENST00000444814 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.85■□□□□ 0.29
LTBR-204ENST00000444814 ILDR2Q71H61 639 aa16.85■□□□□ 0.29
LTBR-204ENST00000444814 CRYBG1Q9Y4K1 1723 aa16.84■□□□□ 0.29
LTBR-204ENST00000444814 AATKQ6ZMQ8 1374 aa16.84■□□□□ 0.29
LTBR-204ENST00000444814 CHRNA2Q15822 529 aa16.83■□□□□ 0.28
LTBR-204ENST00000444814 PLCH1Q4KWH8 1693 aa16.82■□□□□ 0.28
LTBR-204ENST00000444814 SOX12O15370 315 aa16.82■□□□□ 0.28
LTBR-204ENST00000444814 RNF39Q9H2S5 420 aa16.82■□□□□ 0.28
LTBR-204ENST00000444814 NSD3Q9BZ95 1437 aa16.82■□□□□ 0.28
LTBR-204ENST00000444814 STRN4Q9NRL3 753 aa16.81■□□□□ 0.28
LTBR-204ENST00000444814 ARHGEF25Q86VW2 580 aa16.81■□□□□ 0.28
LTBR-204ENST00000444814 KNSTRNQ9Y448 316 aa16.81■□□□□ 0.28
LTBR-204ENST00000444814 ABCC6O95255 1503 aa16.81■□□□□ 0.28
LTBR-204ENST00000444814 OVOS2A0A0J9YW53 1432 aa16.8■□□□□ 0.28
LTBR-204ENST00000444814 OVOS2Q6IE36 1432 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms