RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 TTC21BQ7Z4L5 1316 aa17.66■□□□□ 0.42
SMARCA4-204ENST00000444061 BECN1Q14457 450 aa17.66■□□□□ 0.42
SMARCA4-204ENST00000444061 ARAP3Q8WWN8 1544 aa17.66■□□□□ 0.42
SMARCA4-204ENST00000444061 CHRNA2Q15822 529 aa17.66■□□□□ 0.42
SMARCA4-204ENST00000444061 PPIP5K1Q6PFW1 1433 aa17.66■□□□□ 0.42
SMARCA4-204ENST00000444061 CFAP65Q6ZU64 1925 aaKnown RBP17.65■□□□□ 0.42
SMARCA4-204ENST00000444061 KLHL34Q8N239 644 aa17.65■□□□□ 0.42
SMARCA4-204ENST00000444061 LRRC59Q96AG4 307 aaKnown RBP17.65■□□□□ 0.42
SMARCA4-204ENST00000444061 CFAP44Q96MT7 982 aa17.64■□□□□ 0.41
SMARCA4-204ENST00000444061 ERICH6BQ5W0A0 696 aa17.64■□□□□ 0.41
SMARCA4-204ENST00000444061 KIF16BQ96L93 1317 aa17.64■□□□□ 0.41
SMARCA4-204ENST00000444061 CCDC30Q5VVM6 783 aa17.64■□□□□ 0.41
SMARCA4-204ENST00000444061 NSD2O96028 1365 aa17.64■□□□□ 0.41
SMARCA4-204ENST00000444061 ARHGEF12Q9NZN5 1544 aa17.64■□□□□ 0.41
SMARCA4-204ENST00000444061 USHBP1Q8N6Y0 703 aa17.63■□□□□ 0.41
SMARCA4-204ENST00000444061 KDM5DQ9BY66 1539 aa17.63■□□□□ 0.41
SMARCA4-204ENST00000444061 AMOTQ4VCS5 1084 aa17.62■□□□□ 0.41
SMARCA4-204ENST00000444061 PUS7Q96PZ0 661 aaKnown RBP17.62■□□□□ 0.41
SMARCA4-204ENST00000444061 ADGBQ8N7X0 1667 aa17.62■□□□□ 0.41
SMARCA4-204ENST00000444061 EXOC5O00471 708 aa17.61■□□□□ 0.41
SMARCA4-204ENST00000444061 PLIN1O60240 522 aa17.61■□□□□ 0.41
SMARCA4-204ENST00000444061 KIAA1211Q6ZU35 1233 aa17.61■□□□□ 0.41
SMARCA4-204ENST00000444061 DZIP1LQ8IYY4 767 aaKnown RBP17.61■□□□□ 0.41
SMARCA4-204ENST00000444061 COG6Q9Y2V7 657 aa17.61■□□□□ 0.41
SMARCA4-204ENST00000444061 EIF2AK4Q9P2K8 1649 aaKnown RBP17.6■□□□□ 0.41
SMARCA4-204ENST00000444061 GNAT3A8MTJ3 354 aa17.6■□□□□ 0.41
SMARCA4-204ENST00000444061 HDGFL1Q5TGJ6 251 aa17.6■□□□□ 0.41
SMARCA4-204ENST00000444061 ANKRD36BQ8N2N9 1353 aa17.6■□□□□ 0.41
SMARCA4-204ENST00000444061 HMGB2P26583 209 aaKnown RBP17.6■□□□□ 0.41
SMARCA4-204ENST00000444061 NFE2L2Q16236 605 aa17.6■□□□□ 0.41
SMARCA4-204ENST00000444061 KIF6Q6ZMV9 814 aa17.59■□□□□ 0.41
SMARCA4-204ENST00000444061 TWISTNBQ3B726 338 aaPredicted RBP17.59■□□□□ 0.41
SMARCA4-204ENST00000444061 DDX19BQ9UMR2 479 aa17.59■□□□□ 0.41
SMARCA4-204ENST00000444061 MCCP23508 829 aa17.59■□□□□ 0.41
SMARCA4-204ENST00000444061 NAP1L2Q9ULW6 460 aaPredicted RBP17.59■□□□□ 0.41
SMARCA4-204ENST00000444061 TRPM2O94759 1503 aa17.59■□□□□ 0.41
SMARCA4-204ENST00000444061 ANKRD24Q8TF21 1146 aa17.59■□□□□ 0.41
SMARCA4-204ENST00000444061 C8orf37Q96NL8 207 aa17.59■□□□□ 0.41
SMARCA4-204ENST00000444061 EXOSC9Q06265 439 aaKnown RBP17.58■□□□□ 0.4
SMARCA4-204ENST00000444061 FYB1O15117 783 aa17.58■□□□□ 0.4
SMARCA4-204ENST00000444061 CABLES1Q8TDN4 633 aa17.58■□□□□ 0.4
SMARCA4-204ENST00000444061 ANP32BQ92688 251 aaKnown RBP17.58■□□□□ 0.4
SMARCA4-204ENST00000444061 BTBD11A6QL63 1104 aa17.57■□□□□ 0.4
SMARCA4-204ENST00000444061 RRP1P56182 461 aaKnown RBP17.57■□□□□ 0.4
SMARCA4-204ENST00000444061 DDRGK1Q96HY6 314 aa17.57■□□□□ 0.4
SMARCA4-204ENST00000444061 TMOD3Q9NYL9 352 aa17.57■□□□□ 0.4
SMARCA4-204ENST00000444061 SLAIN2Q9P270 581 aa17.57■□□□□ 0.4
SMARCA4-204ENST00000444061 TRIM6-TRIM34B2RNG4 842 aa17.56■□□□□ 0.4
SMARCA4-204ENST00000444061 ORAI2Q96SN7 254 aa17.56■□□□□ 0.4
SMARCA4-204ENST00000444061 EFCAB6Q5THR3 1501 aa17.56■□□□□ 0.4
SMARCA4-204ENST00000444061 NBR1Q14596 966 aa17.55■□□□□ 0.4
SMARCA4-204ENST00000444061 ISY1Q9ULR0 285 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-204ENST00000444061 SHROOM2Q13796 1616 aa17.55■□□□□ 0.4
SMARCA4-204ENST00000444061 TMPOP42166 694 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-204ENST00000444061 TSR2Q969E8 191 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-204ENST00000444061 FAM177BA6PVY3 158 aa17.55■□□□□ 0.4
SMARCA4-204ENST00000444061 HSP90B1P14625 803 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-204ENST00000444061 NLRP1Q9C000 1473 aa17.55■□□□□ 0.4
SMARCA4-204ENST00000444061 UGGT1Q9NYU2 1555 aa17.55■□□□□ 0.4
SMARCA4-204ENST00000444061 WDR63Q8IWG1 891 aa17.54■□□□□ 0.4
SMARCA4-204ENST00000444061 TESK2Q96S53 571 aa17.54■□□□□ 0.4
SMARCA4-204ENST00000444061 NPHP4O75161 1426 aaPredicted RBP17.54■□□□□ 0.4
SMARCA4-204ENST00000444061 ABCA9Q8IUA7 1624 aa17.54■□□□□ 0.4
SMARCA4-204ENST00000444061 TAOK2Q9UL54 1235 aa17.53■□□□□ 0.4
SMARCA4-204ENST00000444061 CDCA7LQ96GN5 454 aa17.53■□□□□ 0.4
SMARCA4-204ENST00000444061 ERVK-7P63135 1459 aa17.53■□□□□ 0.4
SMARCA4-204ENST00000444061 ABCC11Q96J66 1382 aa17.53■□□□□ 0.4
SMARCA4-204ENST00000444061 PTCD1O75127 700 aaKnown RBP17.53■□□□□ 0.4
SMARCA4-204ENST00000444061 FBLN1P23142 703 aa17.52■□□□□ 0.4
SMARCA4-204ENST00000444061 GCP02774 474 aa17.52■□□□□ 0.39
SMARCA4-204ENST00000444061 MPRIPQ6WCQ1 1025 aa17.52■□□□□ 0.39
SMARCA4-204ENST00000444061 PLEKHG1Q9ULL1 1385 aa17.52■□□□□ 0.39
SMARCA4-204ENST00000444061 CDC42BPAQ5VT25 1732 aa17.51■□□□□ 0.39
SMARCA4-204ENST00000444061 G3BP1Q13283 466 aaKnown RBP eCLIP17.51■□□□□ 0.392e-7■■□□□ 14.1
SMARCA4-204ENST00000444061 HSP90AB2PQ58FF8 381 aa17.51■□□□□ 0.39
SMARCA4-204ENST00000444061 STARD3NLO95772 234 aa17.51■□□□□ 0.39
SMARCA4-204ENST00000444061 SLC4A2P04920 1241 aa17.51■□□□□ 0.39
SMARCA4-204ENST00000444061 UBTFL1P0CB47 393 aaPredicted RBP17.51■□□□□ 0.39
SMARCA4-204ENST00000444061 MCM10Q7L590 875 aa17.51■□□□□ 0.39
SMARCA4-204ENST00000444061 IFNL2Q8IZJ0 200 aa17.51■□□□□ 0.39
SMARCA4-204ENST00000444061 CRBNQ96SW2 442 aa17.51■□□□□ 0.39
SMARCA4-204ENST00000444061 SIRT1Q96EB6 747 aa17.5■□□□□ 0.39
SMARCA4-204ENST00000444061 ZRANB1Q9UGI0 708 aa17.5■□□□□ 0.39
SMARCA4-204ENST00000444061 GCC2Q8IWJ2 1684 aa17.5■□□□□ 0.39
SMARCA4-204ENST00000444061 ANKRD45Q5TZF3 282 aa17.5■□□□□ 0.39
SMARCA4-204ENST00000444061 MYL6BP14649 208 aa17.49■□□□□ 0.39
SMARCA4-204ENST00000444061 CCDC184Q52MB2 194 aa17.49■□□□□ 0.39
SMARCA4-204ENST00000444061 VPS37DQ86XT2 251 aa17.49■□□□□ 0.39
SMARCA4-204ENST00000444061 TMEM94Q12767 1356 aa17.49■□□□□ 0.39
SMARCA4-204ENST00000444061 THUMPD2Q9BTF0 503 aaKnown RBP17.48■□□□□ 0.39
SMARCA4-204ENST00000444061 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
SMARCA4-204ENST00000444061 PPP1R1BQ9UD71 204 aaPredicted RBP17.48■□□□□ 0.39
SMARCA4-204ENST00000444061 TAF7Q15545 349 aaPredicted RBP17.48■□□□□ 0.39
SMARCA4-204ENST00000444061 ABCC3O15438 1527 aa17.47■□□□□ 0.39
SMARCA4-204ENST00000444061 DCTN1Q14203 1278 aa17.47■□□□□ 0.39
SMARCA4-204ENST00000444061 GNAI3P08754 354 aa17.47■□□□□ 0.39
SMARCA4-204ENST00000444061 EXOC6Q8TAG9 804 aa17.47■□□□□ 0.39
SMARCA4-204ENST00000444061 HSP90AB4PQ58FF6 505 aa17.46■□□□□ 0.39
SMARCA4-204ENST00000444061 NCLP19338 710 aaKnown RBP17.45■□□□□ 0.38
SMARCA4-204ENST00000444061 AMER1Q5JTC6 1135 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms