RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 BEGAINQ9BUH8 593 aa10.67□□□□□ -0.7
R3HDM1-210ENST00000443537 HDGFP51858 240 aaKnown RBP10.66□□□□□ -0.7
R3HDM1-210ENST00000443537 NBPF3Q9H094 633 aa10.66□□□□□ -0.7
R3HDM1-210ENST00000443537 TMEM134Q9H6X4 195 aa10.66□□□□□ -0.7
R3HDM1-210ENST00000443537 MAST1Q9Y2H9 1570 aa10.65□□□□□ -0.7
R3HDM1-210ENST00000443537 DDX11L8A8MPP1 907 aa10.65□□□□□ -0.7
R3HDM1-210ENST00000443537 LSM11P83369 360 aaKnown RBP eCLIP10.65□□□□□ -0.7
R3HDM1-210ENST00000443537 FAM50AQ14320 339 aaKnown RBP10.65□□□□□ -0.7
R3HDM1-210ENST00000443537 SULF1Q8IWU6 871 aa10.65□□□□□ -0.7
R3HDM1-210ENST00000443537 CCDC141Q6ZP82 1450 aa10.65□□□□□ -0.7
R3HDM1-210ENST00000443537 GCC2Q8IWJ2 1684 aa10.65□□□□□ -0.7
R3HDM1-210ENST00000443537 ROCK1Q13464 1354 aa10.65□□□□□ -0.71
R3HDM1-210ENST00000443537 STAC3Q96MF2 364 aa10.64□□□□□ -0.71
R3HDM1-210ENST00000443537 DAPK1P53355 1430 aa10.64□□□□□ -0.71
R3HDM1-210ENST00000443537 SYCP2Q9BX26 1530 aa10.63□□□□□ -0.71
R3HDM1-210ENST00000443537 TK2O00142 265 aa10.63□□□□□ -0.71
R3HDM1-210ENST00000443537 SLC4A3P48751 1232 aa10.63□□□□□ -0.71
R3HDM1-210ENST00000443537 FAM98CQ17RN3 349 aaKnown RBP10.63□□□□□ -0.71
R3HDM1-210ENST00000443537 ANKRD13DQ6ZTN6 518 aa10.63□□□□□ -0.71
R3HDM1-210ENST00000443537 RDH13Q8NBN7 331 aa10.63□□□□□ -0.71
R3HDM1-210ENST00000443537 PCGF6Q9BYE7 350 aa10.63□□□□□ -0.71
R3HDM1-210ENST00000443537 ADGRL2O95490 1459 aa10.62□□□□□ -0.71
R3HDM1-210ENST00000443537 MBD5Q9P267 1494 aa10.62□□□□□ -0.71
R3HDM1-210ENST00000443537 PLXNC1O60486 1568 aa10.62□□□□□ -0.71
R3HDM1-210ENST00000443537 ADGRL1O94910 1474 aa10.61□□□□□ -0.71
R3HDM1-210ENST00000443537 ZNF518AQ6AHZ1 1483 aa10.61□□□□□ -0.71
R3HDM1-210ENST00000443537 HFM1A2PYH4 1435 aa10.61□□□□□ -0.71
R3HDM1-210ENST00000443537 PPRC1Q5VV67 1664 aaKnown RBP10.61□□□□□ -0.71
R3HDM1-210ENST00000443537 SWT1Q5T5J6 900 aaKnown RBP10.61□□□□□ -0.71
R3HDM1-210ENST00000443537 ADGRD1Q6QNK2 874 aa10.61□□□□□ -0.71
R3HDM1-210ENST00000443537 MRPL50Q8N5N7 158 aaKnown RBP10.61□□□□□ -0.71
R3HDM1-210ENST00000443537 RSPH6AQ9H0K4 717 aa10.61□□□□□ -0.71
R3HDM1-210ENST00000443537 ABCC5O15440 1437 aa10.6□□□□□ -0.71
R3HDM1-210ENST00000443537 TSPOAP1O95153 1857 aa10.6□□□□□ -0.71
R3HDM1-210ENST00000443537 KDM5CP41229 1560 aa10.6□□□□□ -0.71
R3HDM1-210ENST00000443537 RTEL1-TNFRSF6BF6WH68 1400 aa10.59□□□□□ -0.71
R3HDM1-210ENST00000443537 RNF40O75150 1001 aa10.59□□□□□ -0.71
R3HDM1-210ENST00000443537 TSPY4P0CV99 314 aa10.59□□□□□ -0.71
R3HDM1-210ENST00000443537 TSPY10P0CW01 314 aa10.59□□□□□ -0.71
R3HDM1-210ENST00000443537 HRCP23327 699 aa10.59□□□□□ -0.71
R3HDM1-210ENST00000443537 FAM69CQ0P6D2 419 aa10.59□□□□□ -0.71
R3HDM1-210ENST00000443537 LAPTM4BQ86VI4 370 aa10.59□□□□□ -0.71
R3HDM1-210ENST00000443537 PCMTD1Q96MG8 357 aaPredicted RBP10.59□□□□□ -0.71
R3HDM1-210ENST00000443537 ANKRD30AQ9BXX3 1397 aa10.59□□□□□ -0.71
R3HDM1-210ENST00000443537 C9orf84Q5VXU9 1444 aa10.58□□□□□ -0.72
R3HDM1-210ENST00000443537 INO80Q9ULG1 1556 aaPredicted RBP10.58□□□□□ -0.72
R3HDM1-210ENST00000443537 NUTM1Q86Y26 1132 aa10.58□□□□□ -0.72
R3HDM1-210ENST00000443537 ZNF777Q9ULD5 760 aaPredicted RBP10.58□□□□□ -0.72
R3HDM1-210ENST00000443537 RICTORQ6R327 1708 aa10.58□□□□□ -0.72
R3HDM1-210ENST00000443537 POGZQ7Z3K3 1410 aa10.58□□□□□ -0.72
R3HDM1-210ENST00000443537 GOLGA8CPA6NN73 597 aa10.57□□□□□ -0.72
R3HDM1-210ENST00000443537 CD46P15529 392 aa10.57□□□□□ -0.72
R3HDM1-210ENST00000443537 SAMD7Q7Z3H4 446 aa10.57□□□□□ -0.72
R3HDM1-210ENST00000443537 HECW2Q9P2P5 1572 aa10.56□□□□□ -0.72
R3HDM1-210ENST00000443537 DENND4BO75064 1496 aaPredicted RBP10.56□□□□□ -0.72
R3HDM1-210ENST00000443537 BHMG1C9JSJ3 638 aaPredicted RBP10.56□□□□□ -0.72
R3HDM1-210ENST00000443537 DIXDC1Q155Q3 683 aa10.56□□□□□ -0.72
R3HDM1-210ENST00000443537 SH3D19Q5HYK7 790 aa10.56□□□□□ -0.72
R3HDM1-210ENST00000443537 ZFRQ96KR1 1074 aaKnown RBP10.56□□□□□ -0.72
R3HDM1-210ENST00000443537 GOPCQ9HD26 462 aa10.56□□□□□ -0.72
R3HDM1-210ENST00000443537 ZMYM4Q5VZL5 1548 aa10.56□□□□□ -0.72
R3HDM1-210ENST00000443537 ZFYVE16Q7Z3T8 1539 aa10.56□□□□□ -0.72
R3HDM1-210ENST00000443537 NCOA1Q15788 1441 aa10.56□□□□□ -0.72
R3HDM1-210ENST00000443537 SCAPERQ9BY12 1400 aa10.56□□□□□ -0.72
R3HDM1-210ENST00000443537 SETD5Q9C0A6 1442 aa10.56□□□□□ -0.72
R3HDM1-210ENST00000443537 ZNF644Q9H582 1327 aaPredicted RBP10.56□□□□□ -0.72
R3HDM1-210ENST00000443537 ATP7AQ04656 1500 aa10.55□□□□□ -0.72
R3HDM1-210ENST00000443537 SLF2Q8IX21 1173 aa10.55□□□□□ -0.72
R3HDM1-210ENST00000443537 TBC1D2Q9BYX2 928 aa10.55□□□□□ -0.72
R3HDM1-210ENST00000443537 POLR3EQ9NVU0 708 aa10.55□□□□□ -0.72
R3HDM1-210ENST00000443537 MAGI2Q86UL8 1455 aa10.55□□□□□ -0.72
R3HDM1-210ENST00000443537 MLH3Q9UHC1 1453 aa10.55□□□□□ -0.72
R3HDM1-210ENST00000443537 EIF2AK4Q9P2K8 1649 aaKnown RBP10.55□□□□□ -0.72
R3HDM1-210ENST00000443537 DUOX2Q9NRD8 1548 aa10.54□□□□□ -0.72
R3HDM1-210ENST00000443537 ARHGEF12Q9NZN5 1544 aa10.54□□□□□ -0.72
R3HDM1-210ENST00000443537 NAIPQ13075 1403 aa10.54□□□□□ -0.72
R3HDM1-210ENST00000443537 PTPRKQ15262 1439 aa10.53□□□□□ -0.72
R3HDM1-210ENST00000443537 SKIV2LQ15477 1246 aaKnown RBP10.53□□□□□ -0.72
R3HDM1-210ENST00000443537 KIDINS220Q9ULH0 1771 aa10.52□□□□□ -0.72
R3HDM1-210ENST00000443537 ERBINQ96RT1 1412 aa10.52□□□□□ -0.73
R3HDM1-210ENST00000443537 MYSM1Q5VVJ2 828 aa10.52□□□□□ -0.73
R3HDM1-210ENST00000443537 SPIRE2Q8WWL2 714 aa10.52□□□□□ -0.73
R3HDM1-210ENST00000443537 LRCH3Q96II8 777 aa10.52□□□□□ -0.73
R3HDM1-210ENST00000443537 BCORL1Q5H9F3 1711 aa10.52□□□□□ -0.73
R3HDM1-210ENST00000443537 TRAPPC8Q9Y2L5 1435 aa10.51□□□□□ -0.73
R3HDM1-210ENST00000443537 HRO43593 1189 aa10.51□□□□□ -0.73
R3HDM1-210ENST00000443537 ITGAEP38570 1179 aa10.51□□□□□ -0.73
R3HDM1-210ENST00000443537 HNRNPMP52272 730 aaKnown RBP eCLIP10.51□□□□□ -0.73
R3HDM1-210ENST00000443537 SPAG9O60271 1321 aaKnown RBP10.51□□□□□ -0.73
R3HDM1-210ENST00000443537 KIF15Q9NS87 1388 aa10.51□□□□□ -0.73
R3HDM1-210ENST00000443537 SLC10A3P09131 477 aa10.5□□□□□ -0.73
R3HDM1-210ENST00000443537 CLK2P49760 499 aaKnown RBP10.5□□□□□ -0.73
R3HDM1-210ENST00000443537 ANKK1Q8NFD2 765 aa10.5□□□□□ -0.73
R3HDM1-210ENST00000443537 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.5□□□□□ -0.73
R3HDM1-210ENST00000443537 FRMPD1Q5SYB0 1578 aa10.5□□□□□ -0.73
R3HDM1-210ENST00000443537 REREQ9P2R6 1566 aa10.5□□□□□ -0.73
R3HDM1-210ENST00000443537 RAB3GAP2Q9H2M9 1393 aa10.5□□□□□ -0.73
R3HDM1-210ENST00000443537 ANKRD50Q9ULJ7 1429 aa10.5□□□□□ -0.73
R3HDM1-210ENST00000443537 KDM4AO75164 1064 aa10.49□□□□□ -0.73
R3HDM1-210ENST00000443537 GCGRP47871 477 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms