RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 BECN1Q14457 450 aa19.62■□□□□ 0.73
APP-208ENST00000439274 DZIP1LQ8IYY4 767 aaKnown RBP19.62■□□□□ 0.73
APP-208ENST00000439274 SMC4Q9NTJ3 1288 aa19.61■□□□□ 0.73
APP-208ENST00000439274 PREX1Q8TCU6 1659 aa19.61■□□□□ 0.73
APP-208ENST00000439274 PLEKHF1Q96S99 279 aa19.61■□□□□ 0.73
APP-208ENST00000439274 TRIM35Q9UPQ4 493 aa19.6■□□□□ 0.73
APP-208ENST00000439274 TMPOP42166 694 aaKnown RBP19.6■□□□□ 0.73
APP-208ENST00000439274 TBC1D32Q96NH3 1257 aa19.6■□□□□ 0.73
APP-208ENST00000439274 ABCC11Q96J66 1382 aa19.6■□□□□ 0.73
APP-208ENST00000439274 SSH1Q8WYL5 1049 aa19.59■□□□□ 0.73
APP-208ENST00000439274 UPF2Q9HAU5 1272 aaKnown RBP19.59■□□□□ 0.73
APP-208ENST00000439274 MINK1Q8N4C8 1332 aaPredicted RBP19.59■□□□□ 0.73
APP-208ENST00000439274 CLTCQ00610 1675 aaKnown RBP19.58■□□□□ 0.73
APP-208ENST00000439274 TRIM27P14373 513 aa19.58■□□□□ 0.73
APP-208ENST00000439274 NCBP3Q53F19 620 aaKnown RBP19.57■□□□□ 0.72
APP-208ENST00000439274 COL3A1P02461 1466 aaPredicted RBP19.56■□□□□ 0.72
APP-208ENST00000439274 FYB1O15117 783 aa19.56■□□□□ 0.72
APP-208ENST00000439274 ITPRIPQ8IWB1 547 aa19.56■□□□□ 0.72
APP-208ENST00000439274 TBC1D2Q9BYX2 928 aa19.56■□□□□ 0.72
APP-208ENST00000439274 PRAM1Q96QH2 718 aa19.55■□□□□ 0.72
APP-208ENST00000439274 POGKQ9P215 609 aa19.55■□□□□ 0.72
APP-208ENST00000439274 ANTXR1Q9H6X2 564 aa19.55■□□□□ 0.72
APP-208ENST00000439274 ZMYM3Q14202 1370 aa19.54■□□□□ 0.72
APP-208ENST00000439274 NOB1Q9ULX3 412 aaKnown RBP19.54■□□□□ 0.72
APP-208ENST00000439274 SPRYD3Q8NCJ5 442 aa19.54■□□□□ 0.72
APP-208ENST00000439274 CT47B1P0C2W7 299 aaPredicted RBP19.53■□□□□ 0.72
APP-208ENST00000439274 RIPK4P57078 832 aa19.53■□□□□ 0.72
APP-208ENST00000439274 ANO8Q9HCE9 1232 aaPredicted RBP19.53■□□□□ 0.72
APP-208ENST00000439274 ATF7IPQ6VMQ6 1270 aa19.53■□□□□ 0.72
APP-208ENST00000439274 MYO5BQ9ULV0 1848 aa19.52■□□□□ 0.72
APP-208ENST00000439274 PTPRMP28827 1452 aa19.52■□□□□ 0.72
APP-208ENST00000439274 CD163L1Q9NR16 1453 aa19.52■□□□□ 0.72
APP-208ENST00000439274 TMEM57Q8N5G2 664 aa19.51■□□□□ 0.71
APP-208ENST00000439274 TERF2IPQ9NYB0 399 aa19.51■□□□□ 0.71
APP-208ENST00000439274 FBLN1P23142 703 aa19.5■□□□□ 0.71
APP-208ENST00000439274 MFAP1P55081 439 aaKnown RBP19.5■□□□□ 0.71
APP-208ENST00000439274 DDX19BQ9UMR2 479 aa19.5■□□□□ 0.71
APP-208ENST00000439274 DIAPH1O60610 1272 aaKnown RBP19.49■□□□□ 0.71
APP-208ENST00000439274 HDAC1Q13547 482 aaPredicted RBP19.49■□□□□ 0.71
APP-208ENST00000439274 TMEM131LA2VDJ0 1609 aa19.49■□□□□ 0.71
APP-208ENST00000439274 ATAD2Q6PL18 1390 aa19.49■□□□□ 0.71
APP-208ENST00000439274 ZFYVE9O95405 1425 aa19.49■□□□□ 0.71
APP-208ENST00000439274 SLC52A1Q9NWF4 448 aa19.49■□□□□ 0.71
APP-208ENST00000439274 FBXO31Q5XUX0 539 aaPredicted RBP19.48■□□□□ 0.71
APP-208ENST00000439274 MLECQ14165 292 aa19.48■□□□□ 0.71
APP-208ENST00000439274 YTHDC2Q9H6S0 1430 aaKnown RBP19.47■□□□□ 0.71
APP-208ENST00000439274 C22orf23Q9BZE7 217 aa19.47■□□□□ 0.71
APP-208ENST00000439274 CABP1Q9NZU7 370 aa19.47■□□□□ 0.71
APP-208ENST00000439274 CDK19Q9BWU1 502 aa19.47■□□□□ 0.71
APP-208ENST00000439274 IL16Q14005 1332 aa19.47■□□□□ 0.71
APP-208ENST00000439274 SPATA31D1Q6ZQQ2 1576 aa19.46■□□□□ 0.71
APP-208ENST00000439274 ZBTB40Q9NUA8 1239 aa19.46■□□□□ 0.71
APP-208ENST00000439274 HDGFL2Q7Z4V5 671 aaPredicted RBP19.45■□□□□ 0.7
APP-208ENST00000439274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.45■□□□□ 0.7
APP-208ENST00000439274 ANKRD26Q9UPS8 1709 aa19.45■□□□□ 0.7
APP-208ENST00000439274 SMC5Q8IY18 1101 aa19.45■□□□□ 0.7
APP-208ENST00000439274 PPP6R1Q9UPN7 881 aa19.45■□□□□ 0.7
APP-208ENST00000439274 MED14O60244 1454 aa19.43■□□□□ 0.7
APP-208ENST00000439274 PNPLA6Q8IY17 1366 aa19.43■□□□□ 0.7
APP-208ENST00000439274 PRKAR2BP31323 418 aa19.43■□□□□ 0.7
APP-208ENST00000439274 KIF16BQ96L93 1317 aa19.42■□□□□ 0.7
APP-208ENST00000439274 LRRC7Q96NW7 1537 aa19.42■□□□□ 0.7
APP-208ENST00000439274 THUMPD2Q9BTF0 503 aaKnown RBP19.42■□□□□ 0.7
APP-208ENST00000439274 LNPKQ9C0E8 428 aa19.41■□□□□ 0.7
APP-208ENST00000439274 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.41■□□□□ 0.7
APP-208ENST00000439274 IPO8O15397 1037 aaKnown RBP19.4■□□□□ 0.7
APP-208ENST00000439274 HMOX1P09601 288 aa19.4■□□□□ 0.7
APP-208ENST00000439274 TRHP20396 242 aaPredicted RBP19.4■□□□□ 0.7
APP-208ENST00000439274 RSPH6AQ9H0K4 717 aa19.4■□□□□ 0.7
APP-208ENST00000439274 WAPLQ7Z5K2 1190 aa19.4■□□□□ 0.7
APP-208ENST00000439274 PHACTR3Q96KR7 559 aa19.4■□□□□ 0.7
APP-208ENST00000439274 POLKQ9UBT6 870 aa19.4■□□□□ 0.7
APP-208ENST00000439274 FCHSD2O94868 740 aa19.39■□□□□ 0.69
APP-208ENST00000439274 ALKQ9UM73 1620 aa19.39■□□□□ 0.69
APP-208ENST00000439274 ARXQ96QS3 562 aa19.39■□□□□ 0.69
APP-208ENST00000439274 PNNQ9H307 717 aaKnown RBP19.39■□□□□ 0.69
APP-208ENST00000439274 NUCB1Q02818 461 aa19.38■□□□□ 0.69
APP-208ENST00000439274 ALDH1L2Q3SY69 923 aa19.38■□□□□ 0.69
APP-208ENST00000439274 STAG3Q9UJ98 1225 aa19.38■□□□□ 0.69
APP-208ENST00000439274 KIF20BQ96Q89 1820 aa19.37■□□□□ 0.69
APP-208ENST00000439274 C1orf115Q9H7X2 142 aa19.37■□□□□ 0.69
APP-208ENST00000439274 FAM135BQ49AJ0 1406 aa19.37■□□□□ 0.69
APP-208ENST00000439274 ELL2O00472 640 aaPredicted RBP19.35■□□□□ 0.69
APP-208ENST00000439274 MCM4P33991 863 aa19.35■□□□□ 0.69
APP-208ENST00000439274 TSPYL6Q8N831 410 aa19.35■□□□□ 0.69
APP-208ENST00000439274 CHD1LQ86WJ1 897 aa19.35■□□□□ 0.69
APP-208ENST00000439274 EMILIN1Q9Y6C2 1016 aa19.35■□□□□ 0.69
APP-208ENST00000439274 GZF1Q9H116 711 aaPredicted RBP19.34■□□□□ 0.69
APP-208ENST00000439274 DNAJC5Q9H3Z4 198 aa19.34■□□□□ 0.69
APP-208ENST00000439274 CHMP5Q9NZZ3 219 aa19.33■□□□□ 0.69
APP-208ENST00000439274 A2ML1A8K2U0 1454 aa19.33■□□□□ 0.69
APP-208ENST00000439274 CDC42BPGQ6DT37 1551 aa19.33■□□□□ 0.69
APP-208ENST00000439274 VAMP4O75379 141 aa19.33■□□□□ 0.68
APP-208ENST00000439274 NFE2L2Q16236 605 aa19.33■□□□□ 0.68
APP-208ENST00000439274 HSCBQ8IWL3 235 aa19.33■□□□□ 0.68
APP-208ENST00000439274 ZRANB1Q9UGI0 708 aa19.33■□□□□ 0.68
APP-208ENST00000439274 MRPL50Q8N5N7 158 aaKnown RBP19.32■□□□□ 0.68
APP-208ENST00000439274 ZBTB7BO15156 539 aaPredicted RBP19.32■□□□□ 0.68
APP-208ENST00000439274 PPIP5K1Q6PFW1 1433 aa19.32■□□□□ 0.68
APP-208ENST00000439274 ANKRD45Q5TZF3 282 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms