RNA–Protein interactions for RNA: ENST00000437736.5

PSMD4-204, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 787 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-204	ENST00000437736	SLC12A5	Q9H2X9	1139 aa		14	□□□□□ -0.17
PSMD4-204	ENST00000437736	KIF7	Q2M1P5	1343 aa		13.99	□□□□□ -0.17
PSMD4-204	ENST00000437736	C8orf37	Q96NL8	207 aa		13.99	□□□□□ -0.17
PSMD4-204	ENST00000437736	CD163L1	Q9NR16	1453 aa		13.99	□□□□□ -0.17
PSMD4-204	ENST00000437736	AKAP12	Q02952	1782 aa		13.99	□□□□□ -0.17
PSMD4-204	ENST00000437736	USP6	P35125	1406 aa		13.98	□□□□□ -0.17
PSMD4-204	ENST00000437736	TNS3	Q68CZ2	1445 aa		13.98	□□□□□ -0.17
PSMD4-204	ENST00000437736	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.98	□□□□□ -0.17
PSMD4-204	ENST00000437736		A0A1W2PP64	1363 aa		13.98	□□□□□ -0.17
PSMD4-204	ENST00000437736	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.98	□□□□□ -0.17
PSMD4-204	ENST00000437736	CABLES1	Q8TDN4	633 aa		13.98	□□□□□ -0.17
PSMD4-204	ENST00000437736	SBNO1	A3KN83	1393 aa		13.97	□□□□□ -0.17
PSMD4-204	ENST00000437736	KTN1	Q86UP2	1357 aa	Known RBP	13.97	□□□□□ -0.17
PSMD4-204	ENST00000437736	HAP1	P54257	671 aa	Predicted RBP	13.97	□□□□□ -0.17
PSMD4-204	ENST00000437736	TERF2IP	Q9NYB0	399 aa		13.97	□□□□□ -0.17
PSMD4-204	ENST00000437736	MON2	Q7Z3U7	1717 aa		13.97	□□□□□ -0.17
PSMD4-204	ENST00000437736	CPSF1	Q10570	1443 aa	Known RBP	13.97	□□□□□ -0.17
PSMD4-204	ENST00000437736	NRK	Q7Z2Y5	1582 aa		13.96	□□□□□ -0.17
PSMD4-204	ENST00000437736	POTEA	Q6S8J7	498 aa		13.96	□□□□□ -0.17
PSMD4-204	ENST00000437736	NGLY1	Q96IV0	654 aa		13.96	□□□□□ -0.17
PSMD4-204	ENST00000437736	ANKRD36B	Q8N2N9	1353 aa		13.96	□□□□□ -0.18
PSMD4-204	ENST00000437736	CCDC7	Q96M83	1385 aa		13.96	□□□□□ -0.18
PSMD4-204	ENST00000437736	AFF2	P51816	1311 aa		13.95	□□□□□ -0.18
PSMD4-204	ENST00000437736	WASHC2A	Q641Q2	1341 aa		13.95	□□□□□ -0.18
PSMD4-204	ENST00000437736	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.95	□□□□□ -0.18
PSMD4-204	ENST00000437736	NUTM2G	Q5VZR2	741 aa		13.95	□□□□□ -0.18
PSMD4-204	ENST00000437736	ARHGEF10	O15013	1369 aa		13.95	□□□□□ -0.18
PSMD4-204	ENST00000437736	ZNF692	Q9BU19	519 aa	Predicted RBP	13.94	□□□□□ -0.18
PSMD4-204	ENST00000437736	ALS2	Q96Q42	1657 aa		13.94	□□□□□ -0.18
PSMD4-204	ENST00000437736	EDC4	Q6P2E9	1401 aa	Known RBP	13.93	□□□□□ -0.18
PSMD4-204	ENST00000437736	ZNF772	Q68DY9	489 aa	Predicted RBP	13.93	□□□□□ -0.18
PSMD4-204	ENST00000437736	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
PSMD4-204	ENST00000437736	SSH2	Q76I76	1423 aa		13.92	□□□□□ -0.18
PSMD4-204	ENST00000437736	PIK3C2A	O00443	1686 aa		13.91	□□□□□ -0.18
PSMD4-204	ENST00000437736	TTC21B	Q7Z4L5	1316 aa		13.91	□□□□□ -0.18
PSMD4-204	ENST00000437736	NSD3	Q9BZ95	1437 aa		13.91	□□□□□ -0.18
PSMD4-204	ENST00000437736	ABTB2	Q8N961	1025 aa		13.91	□□□□□ -0.18
PSMD4-204	ENST00000437736	BRD4	O60885	1362 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMD4-204	ENST00000437736	TTC21A	Q8NDW8	1320 aa		13.9	□□□□□ -0.19
PSMD4-204	ENST00000437736	NME9	Q86XW9	330 aa		13.89	□□□□□ -0.19
PSMD4-204	ENST00000437736	PANK3	Q9H999	370 aa		13.89	□□□□□ -0.19
PSMD4-204	ENST00000437736	USP21	Q9UK80	565 aa		13.89	□□□□□ -0.19
PSMD4-204	ENST00000437736	ABCA3	Q99758	1704 aa		13.89	□□□□□ -0.19
PSMD4-204	ENST00000437736	CARD14	Q9BXL6	1004 aa		13.88	□□□□□ -0.19
PSMD4-204	ENST00000437736	QTRT2	Q9H974	415 aa	Known RBP	13.88	□□□□□ -0.19
PSMD4-204	ENST00000437736	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.87	□□□□□ -0.19
PSMD4-204	ENST00000437736	NLRP6	P59044	892 aa		13.87	□□□□□ -0.19
PSMD4-204	ENST00000437736	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.87	□□□□□ -0.19
PSMD4-204	ENST00000437736	CRYBG1	Q9Y4K1	1723 aa		13.87	□□□□□ -0.19
PSMD4-204	ENST00000437736	KIF20B	Q96Q89	1820 aa		13.86	□□□□□ -0.19
PSMD4-204	ENST00000437736	FAM83G	A6ND36	823 aa		13.86	□□□□□ -0.19
PSMD4-204	ENST00000437736	RXRB	P28702	533 aa		13.86	□□□□□ -0.19
PSMD4-204	ENST00000437736	NLRP13	Q86W25	1043 aa		13.86	□□□□□ -0.19
PSMD4-204	ENST00000437736	ZRANB1	Q9UGI0	708 aa		13.86	□□□□□ -0.19
PSMD4-204	ENST00000437736	MARF1	Q9Y4F3	1742 aa	Known RBP	13.85	□□□□□ -0.19
PSMD4-204	ENST00000437736	ZC3H6	P61129	1189 aa	Known RBP	13.85	□□□□□ -0.19
PSMD4-204	ENST00000437736	USP19	O94966	1318 aa		13.85	□□□□□ -0.19
PSMD4-204	ENST00000437736	SOX12	O15370	315 aa		13.84	□□□□□ -0.19
PSMD4-204	ENST00000437736	GGNBP2	Q9H3C7	697 aa		13.84	□□□□□ -0.19
PSMD4-204	ENST00000437736	CGNL1	Q0VF96	1302 aa		13.84	□□□□□ -0.19
PSMD4-204	ENST00000437736	SLIT3	O75094	1523 aa		13.84	□□□□□ -0.19
PSMD4-204	ENST00000437736	OVOS2	A0A0J9YW53	1432 aa		13.83	□□□□□ -0.2
PSMD4-204	ENST00000437736	OVOS2	Q6IE36	1432 aa		13.83	□□□□□ -0.2
PSMD4-204	ENST00000437736	USP54	Q70EL1	1684 aa		13.83	□□□□□ -0.2
PSMD4-204	ENST00000437736	BCL9L	Q86UU0	1499 aa		13.83	□□□□□ -0.2
PSMD4-204	ENST00000437736	ZBTB7C	A1YPR0	619 aa		13.83	□□□□□ -0.2
PSMD4-204	ENST00000437736	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.83	□□□□□ -0.2
PSMD4-204	ENST00000437736	CHRNA2	Q15822	529 aa		13.83	□□□□□ -0.2
PSMD4-204	ENST00000437736	PRDM11	Q9NQV5	511 aa		13.83	□□□□□ -0.2
PSMD4-204	ENST00000437736	TRPC5	Q9UL62	973 aa	Predicted RBP	13.83	□□□□□ -0.2
PSMD4-204	ENST00000437736	USP31	Q70CQ4	1352 aa		13.83	□□□□□ -0.2
PSMD4-204	ENST00000437736	SOCS7	O14512	581 aa		13.82	□□□□□ -0.2
PSMD4-204	ENST00000437736	FYB1	O15117	783 aa		13.82	□□□□□ -0.2
PSMD4-204	ENST00000437736	UNC5CL	Q8IV45	518 aa		13.82	□□□□□ -0.2
PSMD4-204	ENST00000437736	COG3	Q96JB2	828 aa		13.82	□□□□□ -0.2
PSMD4-204	ENST00000437736	KNSTRN	Q9Y448	316 aa		13.82	□□□□□ -0.2
PSMD4-204	ENST00000437736	KIAA0232	Q92628	1395 aa		13.82	□□□□□ -0.2
PSMD4-204	ENST00000437736	SLIT2	O94813	1529 aa		13.81	□□□□□ -0.2
PSMD4-204	ENST00000437736	GC	P02774	474 aa		13.81	□□□□□ -0.2
PSMD4-204	ENST00000437736	RBM6	P78332	1123 aa	Known RBP	13.81	□□□□□ -0.2
PSMD4-204	ENST00000437736	BTG4	Q9NY30	223 aa		13.81	□□□□□ -0.2
PSMD4-204	ENST00000437736	CCDC9	Q9Y3X0	531 aa	Known RBP	13.81	□□□□□ -0.2
PSMD4-204	ENST00000437736	DDX10	Q13206	875 aa	Known RBP	13.8	□□□□□ -0.2
PSMD4-204	ENST00000437736	CNGB1	Q14028	1251 aa	Predicted RBP	13.8	□□□□□ -0.2
PSMD4-204	ENST00000437736	ATRN	O75882	1429 aa		13.8	□□□□□ -0.2
PSMD4-204	ENST00000437736	NFAT5	O94916	1531 aa		13.8	□□□□□ -0.2
PSMD4-204	ENST00000437736	PLCH1	Q4KWH8	1693 aa		13.79	□□□□□ -0.2
PSMD4-204	ENST00000437736	ANKRD26	Q9UPS8	1709 aa		13.78	□□□□□ -0.2
PSMD4-204	ENST00000437736	KCNH5	Q8NCM2	988 aa		13.78	□□□□□ -0.2
PSMD4-204	ENST00000437736	GJD4	Q96KN9	370 aa	Predicted RBP	13.78	□□□□□ -0.2
PSMD4-204	ENST00000437736	NSD2	O96028	1365 aa		13.78	□□□□□ -0.2
PSMD4-204	ENST00000437736	PER1	O15534	1290 aa	Predicted RBP	13.77	□□□□□ -0.21
PSMD4-204	ENST00000437736	CC2D1B	Q5T0F9	858 aa	Known RBP	13.77	□□□□□ -0.21
PSMD4-204	ENST00000437736	STRN4	Q9NRL3	753 aa		13.77	□□□□□ -0.21
PSMD4-204	ENST00000437736	COL14A1	Q05707	1796 aa	Known RBP	13.76	□□□□□ -0.21
PSMD4-204	ENST00000437736	RGS12	O14924	1447 aa		13.76	□□□□□ -0.21
PSMD4-204	ENST00000437736	TNNT2	P45379	298 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMD4-204	ENST00000437736	VPS72	Q15906	364 aa		13.76	□□□□□ -0.21
PSMD4-204	ENST00000437736	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMD4-204	ENST00000437736	CPD	O75976	1380 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 13 ms