RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 FAM69CQ0P6D2 419 aa23.7■■□□□ 1.38
CHD1L-204ENST00000431239 NFKBIBQ15653 356 aa23.7■■□□□ 1.38
CHD1L-204ENST00000431239 HDGFL2Q7Z4V5 671 aaPredicted RBP23.7■■□□□ 1.38
CHD1L-204ENST00000431239 USP35Q9P2H5 1018 aa23.7■■□□□ 1.38
CHD1L-204ENST00000431239 ADGRB2O60241 1585 aa23.69■■□□□ 1.38
CHD1L-204ENST00000431239 ZKSCAN2Q63HK3 967 aa23.69■■□□□ 1.38
CHD1L-204ENST00000431239 PDZRN3Q9UPQ7 1066 aa23.69■■□□□ 1.38
CHD1L-204ENST00000431239 RIPK4P57078 832 aa23.68■■□□□ 1.38
CHD1L-204ENST00000431239 MVPQ14764 893 aaKnown RBP23.67■■□□□ 1.38
CHD1L-204ENST00000431239 USP19O94966 1318 aa23.67■■□□□ 1.38
CHD1L-204ENST00000431239 DZIP1LQ8IYY4 767 aaKnown RBP23.67■■□□□ 1.38
CHD1L-204ENST00000431239 COL3A1P02461 1466 aaPredicted RBP23.67■■□□□ 1.38
CHD1L-204ENST00000431239 DIAPH1O60610 1272 aaKnown RBP23.66■■□□□ 1.38
CHD1L-204ENST00000431239 SSH1Q8WYL5 1049 aa23.66■■□□□ 1.38
CHD1L-204ENST00000431239 ALKQ9UM73 1620 aa23.65■■□□□ 1.38
CHD1L-204ENST00000431239 NLRP1Q9C000 1473 aa23.64■■□□□ 1.38
CHD1L-204ENST00000431239 TRIM27P14373 513 aa23.64■■□□□ 1.38
CHD1L-204ENST00000431239 ITPRIPQ8IWB1 547 aa23.64■■□□□ 1.38
CHD1L-204ENST00000431239 TSPOAP1O95153 1857 aa23.64■■□□□ 1.37
CHD1L-204ENST00000431239 RWDD1Q9H446 243 aaPredicted RBP23.64■■□□□ 1.37
CHD1L-204ENST00000431239 VIRMAQ69YN4 1812 aaKnown RBP23.63■■□□□ 1.37
CHD1L-204ENST00000431239 NOB1Q9ULX3 412 aaKnown RBP23.61■■□□□ 1.37
CHD1L-204ENST00000431239 HMOX1P09601 288 aa23.6■■□□□ 1.37
CHD1L-204ENST00000431239 ARHGEF40Q8TER5 1519 aa23.6■■□□□ 1.37
CHD1L-204ENST00000431239 PRKAR2BP31323 418 aa23.59■■□□□ 1.37
CHD1L-204ENST00000431239 FRAT2O75474 233 aaPredicted RBP23.58■■□□□ 1.36
CHD1L-204ENST00000431239 AAMPQ13685 434 aa23.58■■□□□ 1.36
CHD1L-204ENST00000431239 THUMPD2Q9BTF0 503 aaKnown RBP23.58■■□□□ 1.36
CHD1L-204ENST00000431239 CLTCQ00610 1675 aaKnown RBP23.57■■□□□ 1.36
CHD1L-204ENST00000431239 ANKRD26Q9UPS8 1709 aa23.57■■□□□ 1.36
CHD1L-204ENST00000431239 ATF7IPQ6VMQ6 1270 aa23.57■■□□□ 1.36
CHD1L-204ENST00000431239 NCBP3Q53F19 620 aaKnown RBP23.56■■□□□ 1.36
CHD1L-204ENST00000431239 POLKQ9UBT6 870 aa23.56■■□□□ 1.36
CHD1L-204ENST00000431239 TMEM57Q8N5G2 664 aa23.56■■□□□ 1.36
CHD1L-204ENST00000431239 ZRANB1Q9UGI0 708 aa23.56■■□□□ 1.36
CHD1L-204ENST00000431239 NCKAP5LQ9HCH0 1330 aa23.55■■□□□ 1.36
CHD1L-204ENST00000431239 SLKQ9H2G2 1235 aaPredicted RBP23.55■■□□□ 1.36
CHD1L-204ENST00000431239 EMILIN1Q9Y6C2 1016 aa23.55■■□□□ 1.36
CHD1L-204ENST00000431239 CT47B1P0C2W7 299 aaPredicted RBP23.55■■□□□ 1.36
CHD1L-204ENST00000431239 LRRC7Q96NW7 1537 aa23.54■■□□□ 1.36
CHD1L-204ENST00000431239 MED14O60244 1454 aa23.54■■□□□ 1.36
CHD1L-204ENST00000431239 KIF20BQ96Q89 1820 aa23.53■■□□□ 1.36
CHD1L-204ENST00000431239 PHACTR3Q96KR7 559 aa23.53■■□□□ 1.36
CHD1L-204ENST00000431239 RIMS2Q9UQ26 1411 aa23.53■■□□□ 1.36
CHD1L-204ENST00000431239 NME9Q86XW9 330 aa23.53■■□□□ 1.36
CHD1L-204ENST00000431239 TXNDC2Q86VQ3 553 aa23.53■■□□□ 1.36
CHD1L-204ENST00000431239 UPF2Q9HAU5 1272 aaKnown RBP23.53■■□□□ 1.36
CHD1L-204ENST00000431239 PNPLA6Q8IY17 1366 aa23.52■■□□□ 1.36
CHD1L-204ENST00000431239 A2ML1A8K2U0 1454 aa23.52■■□□□ 1.36
CHD1L-204ENST00000431239 DDX19BQ9UMR2 479 aa23.52■■□□□ 1.36
CHD1L-204ENST00000431239 RSPH6AQ9H0K4 717 aa23.52■■□□□ 1.36
CHD1L-204ENST00000431239 FCHSD2O94868 740 aa23.5■■□□□ 1.35
CHD1L-204ENST00000431239 IL16Q14005 1332 aa23.5■■□□□ 1.35
CHD1L-204ENST00000431239 ELL2O00472 640 aaPredicted RBP23.5■■□□□ 1.35
CHD1L-204ENST00000431239 GSE1Q14687 1217 aa23.5■■□□□ 1.35
CHD1L-204ENST00000431239 IL27Q8NEV9 243 aa23.5■■□□□ 1.35
CHD1L-204ENST00000431239 PNNQ9H307 717 aaKnown RBP23.49■■□□□ 1.35
CHD1L-204ENST00000431239 BECN1Q14457 450 aa23.48■■□□□ 1.35
CHD1L-204ENST00000431239 RRS1Q15050 365 aaKnown RBP23.47■■□□□ 1.35
CHD1L-204ENST00000431239 TBC1D32Q96NH3 1257 aa23.47■■□□□ 1.35
CHD1L-204ENST00000431239 METP08581 1390 aa23.47■■□□□ 1.35
CHD1L-204ENST00000431239 KIF16BQ96L93 1317 aa23.46■■□□□ 1.35
CHD1L-204ENST00000431239 PPIP5K1Q6PFW1 1433 aa23.46■■□□□ 1.35
CHD1L-204ENST00000431239 DIP2BQ9P265 1576 aa23.46■■□□□ 1.35
CHD1L-204ENST00000431239 MAP2P11137 1827 aaKnown RBP23.46■■□□□ 1.35
CHD1L-204ENST00000431239 MFAP1P55081 439 aaKnown RBP23.46■■□□□ 1.35
CHD1L-204ENST00000431239 SPRYD3Q8NCJ5 442 aa23.46■■□□□ 1.35
CHD1L-204ENST00000431239 FAM135BQ49AJ0 1406 aa23.45■■□□□ 1.34
CHD1L-204ENST00000431239 WASLO00401 505 aaPredicted RBP23.45■■□□□ 1.34
CHD1L-204ENST00000431239 RTN4Q9NQC3 1192 aaKnown RBP23.45■■□□□ 1.34
CHD1L-204ENST00000431239 TSPYL6Q8N831 410 aa23.44■■□□□ 1.34
CHD1L-204ENST00000431239 IPO8O15397 1037 aaKnown RBP23.44■■□□□ 1.34
CHD1L-204ENST00000431239 HDAC1Q13547 482 aaPredicted RBP23.44■■□□□ 1.34
CHD1L-204ENST00000431239 ZBTB40Q9NUA8 1239 aa23.44■■□□□ 1.34
CHD1L-204ENST00000431239 ATP7BP35670 1465 aa23.43■■□□□ 1.34
CHD1L-204ENST00000431239 NFE2L2Q16236 605 aa23.43■■□□□ 1.34
CHD1L-204ENST00000431239 C1orf115Q9H7X2 142 aa23.43■■□□□ 1.34
CHD1L-204ENST00000431239 ESF1Q9H501 851 aaKnown RBP23.43■■□□□ 1.34
CHD1L-204ENST00000431239 NUTM2FA1L443 756 aa23.42■■□□□ 1.34
CHD1L-204ENST00000431239 RIMBP3CA6NJZ7 1639 aa23.42■■□□□ 1.34
CHD1L-204ENST00000431239 RIMBP3BA6NNM3 1639 aa23.42■■□□□ 1.34
CHD1L-204ENST00000431239 RIMBP3Q9UFD9 1639 aa23.42■■□□□ 1.34
CHD1L-204ENST00000431239 NUDT16Q96DE0 195 aaKnown RBP23.42■■□□□ 1.34
CHD1L-204ENST00000431239 LNPKQ9C0E8 428 aa23.41■■□□□ 1.34
CHD1L-204ENST00000431239 TBC1D2Q9BYX2 928 aa23.41■■□□□ 1.34
CHD1L-204ENST00000431239 FAM83GA6ND36 823 aa23.4■■□□□ 1.34
CHD1L-204ENST00000431239 SPATA31D1Q6ZQQ2 1576 aa23.4■■□□□ 1.34
CHD1L-204ENST00000431239 SETD1AO15047 1707 aaKnown RBP23.4■■□□□ 1.34
CHD1L-204ENST00000431239 IL13P35225 146 aa23.39■■□□□ 1.34
CHD1L-204ENST00000431239 DLC1Q96QB1 1528 aa23.39■■□□□ 1.34
CHD1L-204ENST00000431239 DCTN1Q14203 1278 aa23.39■■□□□ 1.33
CHD1L-204ENST00000431239 COG3Q96JB2 828 aa23.39■■□□□ 1.33
CHD1L-204ENST00000431239 ALDH1L2Q3SY69 923 aa23.39■■□□□ 1.33
CHD1L-204ENST00000431239 SMC5Q8IY18 1101 aa23.38■■□□□ 1.33
CHD1L-204ENST00000431239 MBIPQ9NS73 344 aa23.38■■□□□ 1.33
CHD1L-204ENST00000431239 EDC4Q6P2E9 1401 aaKnown RBP23.38■■□□□ 1.33
CHD1L-204ENST00000431239 BRPF3Q9ULD4 1205 aa23.38■■□□□ 1.33
CHD1L-204ENST00000431239 CDC42BPGQ6DT37 1551 aa23.37■■□□□ 1.33
CHD1L-204ENST00000431239 ZMYM3Q14202 1370 aa23.37■■□□□ 1.33
CHD1L-204ENST00000431239 VAMP4O75379 141 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms