RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 ARHGEF10O15013 1369 aa25.04■■□□□ 1.6
CDC42EP1-203ENST00000430687 MYOM1P52179 1685 aa25.04■■□□□ 1.6
CDC42EP1-203ENST00000430687 AKAP12Q02952 1782 aa25.03■■□□□ 1.6
CDC42EP1-203ENST00000430687 PAK3O75914 559 aaPredicted RBP25.03■■□□□ 1.6
CDC42EP1-203ENST00000430687 TTC21AQ8NDW8 1320 aa25.03■■□□□ 1.6
CDC42EP1-203ENST00000430687 TRPM3Q9HCF6 1732 aaPredicted RBP25.03■■□□□ 1.6
CDC42EP1-203ENST00000430687 EDC4Q6P2E9 1401 aaKnown RBP25.03■■□□□ 1.6
CDC42EP1-203ENST00000430687 TTC21BQ7Z4L5 1316 aa25.02■■□□□ 1.6
CDC42EP1-203ENST00000430687 PNPLA6Q8IY17 1366 aa25■■□□□ 1.59
CDC42EP1-203ENST00000430687 MON2Q7Z3U7 1717 aa25■■□□□ 1.59
CDC42EP1-203ENST00000430687 SPATA31A6Q5VVP1 1343 aa24.98■■□□□ 1.59
CDC42EP1-203ENST00000430687 ABTB2Q8N961 1025 aa24.98■■□□□ 1.59
CDC42EP1-203ENST00000430687 PANK3Q9H999 370 aa24.98■■□□□ 1.59
CDC42EP1-203ENST00000430687 LMOD2Q6P5Q4 547 aa24.97■■□□□ 1.59
CDC42EP1-203ENST00000430687 SHPRHQ149N8 1683 aa24.97■■□□□ 1.59
CDC42EP1-203ENST00000430687 NRKQ7Z2Y5 1582 aa24.97■■□□□ 1.59
CDC42EP1-203ENST00000430687 CARD14Q9BXL6 1004 aa24.96■■□□□ 1.59
CDC42EP1-203ENST00000430687 ALS2Q96Q42 1657 aa24.96■■□□□ 1.59
CDC42EP1-203ENST00000430687 COL22A1Q8NFW1 1626 aaPredicted RBP24.94■■□□□ 1.58
CDC42EP1-203ENST00000430687 ZNF316A6NFI3 1004 aaPredicted RBP24.94■■□□□ 1.58
CDC42EP1-203ENST00000430687 NLRP13Q86W25 1043 aa24.94■■□□□ 1.58
CDC42EP1-203ENST00000430687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.94■■□□□ 1.58
CDC42EP1-203ENST00000430687 USP31Q70CQ4 1352 aa24.92■■□□□ 1.58
CDC42EP1-203ENST00000430687 NLRP6P59044 892 aa24.91■■□□□ 1.58
CDC42EP1-203ENST00000430687 NSD3Q9BZ95 1437 aa24.91■■□□□ 1.58
CDC42EP1-203ENST00000430687 CGNL1Q0VF96 1302 aa24.89■■□□□ 1.58
CDC42EP1-203ENST00000430687 MED1Q15648 1581 aaPredicted RBP24.89■■□□□ 1.58
CDC42EP1-203ENST00000430687 NME9Q86XW9 330 aa24.89■■□□□ 1.58
CDC42EP1-203ENST00000430687 USP19O94966 1318 aa24.88■■□□□ 1.57
CDC42EP1-203ENST00000430687 NUTM2GQ5VZR2 741 aa24.88■■□□□ 1.57
CDC42EP1-203ENST00000430687 KNSTRNQ9Y448 316 aa24.88■■□□□ 1.57
CDC42EP1-203ENST00000430687 FYB1O15117 783 aa24.87■■□□□ 1.57
CDC42EP1-203ENST00000430687 PER1O15534 1290 aaPredicted RBP24.87■■□□□ 1.57
CDC42EP1-203ENST00000430687 PIK3C2AO00443 1686 aa24.87■■□□□ 1.57
CDC42EP1-203ENST00000430687 HAP1P54257 671 aaPredicted RBP24.85■■□□□ 1.57
CDC42EP1-203ENST00000430687 CABLES1Q8TDN4 633 aa24.84■■□□□ 1.57
CDC42EP1-203ENST00000430687 COG3Q96JB2 828 aa24.84■■□□□ 1.57
CDC42EP1-203ENST00000430687 NUTM2BA6NNL0 878 aaPredicted RBP24.83■■□□□ 1.57
CDC42EP1-203ENST00000430687 NUTM2EB1AL46 878 aaPredicted RBP24.83■■□□□ 1.57
CDC42EP1-203ENST00000430687 NUTM2AQ8IVF1 878 aaPredicted RBP24.83■■□□□ 1.57
CDC42EP1-203ENST00000430687 KCNH5Q8NCM2 988 aa24.83■■□□□ 1.57
CDC42EP1-203ENST00000430687 NSD2O96028 1365 aa24.82■■□□□ 1.56
CDC42EP1-203ENST00000430687 OVOS2A0A0J9YW53 1432 aa24.82■■□□□ 1.56
CDC42EP1-203ENST00000430687 GCP02774 474 aa24.82■■□□□ 1.56
CDC42EP1-203ENST00000430687 OVOS2Q6IE36 1432 aa24.82■■□□□ 1.56
CDC42EP1-203ENST00000430687 ZRANB1Q9UGI0 708 aa24.82■■□□□ 1.56
CDC42EP1-203ENST00000430687 USP54Q70EL1 1684 aa24.81■■□□□ 1.56
CDC42EP1-203ENST00000430687 SLIT3O75094 1523 aa24.81■■□□□ 1.56
CDC42EP1-203ENST00000430687 GGNBP2Q9H3C7 697 aa24.8■■□□□ 1.56
CDC42EP1-203ENST00000430687 CRYBG1Q9Y4K1 1723 aa24.79■■□□□ 1.56
CDC42EP1-203ENST00000430687 AMER1Q5JTC6 1135 aaPredicted RBP24.79■■□□□ 1.56
CDC42EP1-203ENST00000430687 LRP6O75581 1613 aa24.79■■□□□ 1.56
CDC42EP1-203ENST00000430687 NPC1L1Q9UHC9 1359 aa24.79■■□□□ 1.56
CDC42EP1-203ENST00000430687 PLEKHG5O94827 1062 aa24.78■■□□□ 1.56
CDC42EP1-203ENST00000430687 DDX10Q13206 875 aaKnown RBP24.78■■□□□ 1.56
CDC42EP1-203ENST00000430687 ABCA3Q99758 1704 aa24.77■■□□□ 1.56
CDC42EP1-203ENST00000430687 PHRF1Q9P1Y6 1649 aaKnown RBP24.76■■□□□ 1.55
CDC42EP1-203ENST00000430687 ADAMTS2O95450 1211 aa24.76■■□□□ 1.55
CDC42EP1-203ENST00000430687 MEX3CQ5U5Q3 659 aaKnown RBP24.76■■□□□ 1.55
CDC42EP1-203ENST00000430687 CPDO75976 1380 aa24.76■■□□□ 1.55
CDC42EP1-203ENST00000430687 KIF20BQ96Q89 1820 aa24.75■■□□□ 1.55
CDC42EP1-203ENST00000430687 MARF1Q9Y4F3 1742 aaKnown RBP24.75■■□□□ 1.55
CDC42EP1-203ENST00000430687 ZC3H6P61129 1189 aaKnown RBP24.72■■□□□ 1.55
CDC42EP1-203ENST00000430687 NFAT5O94916 1531 aa24.71■■□□□ 1.55
CDC42EP1-203ENST00000430687 KIAA0232Q92628 1395 aa24.71■■□□□ 1.55
CDC42EP1-203ENST00000430687 ARHGEF25Q86VW2 580 aa24.71■■□□□ 1.55
CDC42EP1-203ENST00000430687 PRDM11Q9NQV5 511 aa24.71■■□□□ 1.55
CDC42EP1-203ENST00000430687 FAM83GA6ND36 823 aa24.7■■□□□ 1.54
CDC42EP1-203ENST00000430687 MORC1Q86VD1 984 aa24.7■■□□□ 1.54
CDC42EP1-203ENST00000430687 NGLY1Q96IV0 654 aa24.69■■□□□ 1.54
CDC42EP1-203ENST00000430687 C8orf37Q96NL8 207 aa24.69■■□□□ 1.54
CDC42EP1-203ENST00000430687 AATKQ6ZMQ8 1374 aa24.68■■□□□ 1.54
CDC42EP1-203ENST00000430687 SOX12O15370 315 aa24.68■■□□□ 1.54
CDC42EP1-203ENST00000430687 FNBP4Q8N3X1 1017 aaPredicted RBP24.68■■□□□ 1.54
CDC42EP1-203ENST00000430687 ANKRD26Q9UPS8 1709 aa24.67■■□□□ 1.54
CDC42EP1-203ENST00000430687 CC2D1BQ5T0F9 858 aaKnown RBP24.67■■□□□ 1.54
CDC42EP1-203ENST00000430687 COL14A1Q05707 1796 aaKnown RBP24.65■■□□□ 1.54
CDC42EP1-203ENST00000430687 SLIT2O94813 1529 aa24.64■■□□□ 1.53
CDC42EP1-203ENST00000430687 KIF24Q5T7B8 1368 aa24.64■■□□□ 1.53
CDC42EP1-203ENST00000430687 ABCC6O95255 1503 aa24.63■■□□□ 1.53
CDC42EP1-203ENST00000430687 CHRNA2Q15822 529 aa24.63■■□□□ 1.53
CDC42EP1-203ENST00000430687 MAP3K19Q56UN5 1328 aa24.62■■□□□ 1.53
CDC42EP1-203ENST00000430687 ILDR2Q71H61 639 aa24.62■■□□□ 1.53
CDC42EP1-203ENST00000430687 AFF2P51816 1311 aa24.61■■□□□ 1.53
CDC42EP1-203ENST00000430687 FBLN1P23142 703 aa24.61■■□□□ 1.53
CDC42EP1-203ENST00000430687 BTG4Q9NY30 223 aa24.61■■□□□ 1.53
CDC42EP1-203ENST00000430687 RTL1A6NKG5 1358 aa24.6■■□□□ 1.53
CDC42EP1-203ENST00000430687 ZBTB7CA1YPR0 619 aa24.6■■□□□ 1.53
CDC42EP1-203ENST00000430687 SOCS7O14512 581 aa24.6■■□□□ 1.53
CDC42EP1-203ENST00000430687 ZNF772Q68DY9 489 aaPredicted RBP24.6■■□□□ 1.53
CDC42EP1-203ENST00000430687 IP6K1Q92551 441 aa24.6■■□□□ 1.53
CDC42EP1-203ENST00000430687 PHF23Q9BUL5 403 aaPredicted RBP24.6■■□□□ 1.53
CDC42EP1-203ENST00000430687 USP21Q9UK80 565 aa24.6■■□□□ 1.53
CDC42EP1-203ENST00000430687 TNNT2P45379 298 aaPredicted RBP24.59■■□□□ 1.53
CDC42EP1-203ENST00000430687 AMPHP49418 695 aa24.59■■□□□ 1.53
CDC42EP1-203ENST00000430687 RRS1Q15050 365 aaKnown RBP24.59■■□□□ 1.53
CDC42EP1-203ENST00000430687 UNC5CLQ8IV45 518 aa24.59■■□□□ 1.53
CDC42EP1-203ENST00000430687 POLKQ9UBT6 870 aa24.59■■□□□ 1.53
CDC42EP1-203ENST00000430687 BCL9LQ86UU0 1499 aa24.58■■□□□ 1.53
CDC42EP1-203ENST00000430687 LMO7Q8WWI1 1683 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms