RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 MINK1Q8N4C8 1332 aaPredicted RBP23.91■■□□□ 1.42
PDE6B-202ENST00000429163 TRHP20396 242 aaPredicted RBP23.9■■□□□ 1.42
PDE6B-202ENST00000429163 NEUROD2Q15784 382 aa23.9■■□□□ 1.42
PDE6B-202ENST00000429163 SIRT1Q96EB6 747 aa23.9■■□□□ 1.42
PDE6B-202ENST00000429163 RRP7AQ9Y3A4 280 aaKnown RBP23.9■■□□□ 1.42
PDE6B-202ENST00000429163 SAFB2Q14151 953 aaKnown RBP eCLIP23.9■■□□□ 1.42
PDE6B-202ENST00000429163 RTL5Q5HYW3 569 aaPredicted RBP23.89■■□□□ 1.41
PDE6B-202ENST00000429163 TMPOP42166 694 aaKnown RBP23.88■■□□□ 1.41
PDE6B-202ENST00000429163 GGNBP2Q9H3C7 697 aa23.87■■□□□ 1.41
PDE6B-202ENST00000429163 KNDC1Q76NI1 1749 aa23.87■■□□□ 1.41
PDE6B-202ENST00000429163 COG6Q9Y2V7 657 aa23.87■■□□□ 1.41
PDE6B-202ENST00000429163 DIAPH1O60610 1272 aaKnown RBP23.86■■□□□ 1.41
PDE6B-202ENST00000429163 IGHDP01880 384 aa23.86■■□□□ 1.41
PDE6B-202ENST00000429163 PANK1Q8TE04 598 aa23.86■■□□□ 1.41
PDE6B-202ENST00000429163 HDGFP51858 240 aaKnown RBP23.85■■□□□ 1.41
PDE6B-202ENST00000429163 FAM135BQ49AJ0 1406 aa23.85■■□□□ 1.41
PDE6B-202ENST00000429163 FCHSD2O94868 740 aa23.84■■□□□ 1.41
PDE6B-202ENST00000429163 TECPR2O15040 1411 aa23.84■■□□□ 1.41
PDE6B-202ENST00000429163 ZKSCAN2Q63HK3 967 aa23.84■■□□□ 1.41
PDE6B-202ENST00000429163 FRAT1Q92837 279 aaPredicted RBP23.83■■□□□ 1.41
PDE6B-202ENST00000429163 TSPOAP1O95153 1857 aa23.83■■□□□ 1.4
PDE6B-202ENST00000429163 SKAP1Q86WV1 359 aa23.83■■□□□ 1.4
PDE6B-202ENST00000429163 ZNF428Q96B54 188 aa23.83■■□□□ 1.4
PDE6B-202ENST00000429163 EDC4Q6P2E9 1401 aaKnown RBP23.83■■□□□ 1.4
PDE6B-202ENST00000429163 CABP1Q9NZU7 370 aa23.82■■□□□ 1.4
PDE6B-202ENST00000429163 TRIM35Q9UPQ4 493 aa23.82■■□□□ 1.4
PDE6B-202ENST00000429163 CPSF1Q10570 1443 aaKnown RBP23.82■■□□□ 1.4
PDE6B-202ENST00000429163 NRXN3Q9Y4C0 1643 aa23.82■■□□□ 1.4
PDE6B-202ENST00000429163 RWDD1Q9H446 243 aaPredicted RBP23.81■■□□□ 1.4
PDE6B-202ENST00000429163 U2SURPO15042 1029 aaKnown RBP23.81■■□□□ 1.4
PDE6B-202ENST00000429163 MVPQ14764 893 aaKnown RBP23.81■■□□□ 1.4
PDE6B-202ENST00000429163 RGS3P49796 1198 aa23.8■■□□□ 1.4
PDE6B-202ENST00000429163 NBR1Q14596 966 aa23.8■■□□□ 1.4
PDE6B-202ENST00000429163 AATKQ6ZMQ8 1374 aa23.8■■□□□ 1.4
PDE6B-202ENST00000429163 PPIP5K1Q6PFW1 1433 aa23.79■■□□□ 1.4
PDE6B-202ENST00000429163 DZIP1LQ8IYY4 767 aaKnown RBP23.78■■□□□ 1.4
PDE6B-202ENST00000429163 DEKP35659 375 aaKnown RBP23.77■■□□□ 1.4
PDE6B-202ENST00000429163 CPS1P31327 1500 aa23.77■■□□□ 1.4
PDE6B-202ENST00000429163 NEFMP07197 916 aa23.76■■□□□ 1.39
PDE6B-202ENST00000429163 RLBP1P12271 317 aa23.76■■□□□ 1.39
PDE6B-202ENST00000429163 BRPF1P55201 1214 aaPredicted RBP23.76■■□□□ 1.39
PDE6B-202ENST00000429163 CALD1Q05682 793 aaKnown RBP23.76■■□□□ 1.39
PDE6B-202ENST00000429163 ALDH1L2Q3SY69 923 aa23.76■■□□□ 1.39
PDE6B-202ENST00000429163 DAXXQ9UER7 740 aaPredicted RBP23.76■■□□□ 1.39
PDE6B-202ENST00000429163 WASLO00401 505 aaPredicted RBP23.75■■□□□ 1.39
PDE6B-202ENST00000429163 CDK12Q9NYV4 1490 aaPredicted RBP23.75■■□□□ 1.39
PDE6B-202ENST00000429163 KIF16BQ96L93 1317 aa23.75■■□□□ 1.39
PDE6B-202ENST00000429163 RIPK4P57078 832 aa23.74■■□□□ 1.39
PDE6B-202ENST00000429163 DDX19BQ9UMR2 479 aa23.74■■□□□ 1.39
PDE6B-202ENST00000429163 FTSJ3Q8IY81 847 aaKnown RBP23.74■■□□□ 1.39
PDE6B-202ENST00000429163 PCDHB15Q9Y5E8 787 aa23.74■■□□□ 1.39
PDE6B-202ENST00000429163 LRRC7Q96NW7 1537 aa23.73■■□□□ 1.39
PDE6B-202ENST00000429163 IPO8O15397 1037 aaKnown RBP23.73■■□□□ 1.39
PDE6B-202ENST00000429163 POLKQ9UBT6 870 aa23.73■■□□□ 1.39
PDE6B-202ENST00000429163 MON2Q7Z3U7 1717 aa23.73■■□□□ 1.39
PDE6B-202ENST00000429163 EXOSC9Q06265 439 aaKnown RBP23.72■■□□□ 1.39
PDE6B-202ENST00000429163 RSPH6AQ9H0K4 717 aa23.72■■□□□ 1.39
PDE6B-202ENST00000429163 SMC4Q9NTJ3 1288 aa23.72■■□□□ 1.39
PDE6B-202ENST00000429163 HDAC1Q13547 482 aaPredicted RBP23.71■■□□□ 1.39
PDE6B-202ENST00000429163 ATF7IPQ6VMQ6 1270 aa23.71■■□□□ 1.39
PDE6B-202ENST00000429163 ESF1Q9H501 851 aaKnown RBP23.71■■□□□ 1.39
PDE6B-202ENST00000429163 WAPLQ7Z5K2 1190 aa23.7■■□□□ 1.38
PDE6B-202ENST00000429163 MAP2P11137 1827 aaKnown RBP23.7■■□□□ 1.38
PDE6B-202ENST00000429163 ZNF692Q9BU19 519 aaPredicted RBP23.69■■□□□ 1.38
PDE6B-202ENST00000429163 AKAP12Q02952 1782 aa23.68■■□□□ 1.38
PDE6B-202ENST00000429163 TSR2Q969E8 191 aaKnown RBP23.68■■□□□ 1.38
PDE6B-202ENST00000429163 CHMP4BQ9H444 224 aaKnown RBP23.68■■□□□ 1.38
PDE6B-202ENST00000429163 CCDC61Q9Y6R9 512 aa23.68■■□□□ 1.38
PDE6B-202ENST00000429163 SSH1Q8WYL5 1049 aa23.68■■□□□ 1.38
PDE6B-202ENST00000429163 BCL2L13Q9BXK5 485 aa23.68■■□□□ 1.38
PDE6B-202ENST00000429163 METP08581 1390 aa23.67■■□□□ 1.38
PDE6B-202ENST00000429163 TNRQ92752 1358 aa23.67■■□□□ 1.38
PDE6B-202ENST00000429163 TRIM27P14373 513 aa23.66■■□□□ 1.38
PDE6B-202ENST00000429163 NFE2L2Q16236 605 aa23.66■■□□□ 1.38
PDE6B-202ENST00000429163 PDZRN3Q9UPQ7 1066 aa23.66■■□□□ 1.38
PDE6B-202ENST00000429163 LMOD3Q0VAK6 560 aa23.65■■□□□ 1.38
PDE6B-202ENST00000429163 C3P01024 1663 aa23.65■■□□□ 1.38
PDE6B-202ENST00000429163 TMEM2Q9UHN6 1383 aa23.65■■□□□ 1.38
PDE6B-202ENST00000429163 USP19O94966 1318 aa23.64■■□□□ 1.38
PDE6B-202ENST00000429163 UBR1Q8IWV7 1749 aa23.64■■□□□ 1.38
PDE6B-202ENST00000429163 ITSN1Q15811 1721 aa23.64■■□□□ 1.37
PDE6B-202ENST00000429163 PRKAR2BP31323 418 aa23.63■■□□□ 1.37
PDE6B-202ENST00000429163 IL13P35225 146 aa23.63■■□□□ 1.37
PDE6B-202ENST00000429163 ARHGAP45Q92619 1136 aa23.63■■□□□ 1.37
PDE6B-202ENST00000429163 NUDT16Q96DE0 195 aaKnown RBP23.63■■□□□ 1.37
PDE6B-202ENST00000429163 UPF2Q9HAU5 1272 aaKnown RBP23.63■■□□□ 1.37
PDE6B-202ENST00000429163 TNNQ9UQP3 1299 aa23.63■■□□□ 1.37
PDE6B-202ENST00000429163 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.63■■□□□ 1.37
PDE6B-202ENST00000429163 IFT57Q9NWB7 429 aa23.62■■□□□ 1.37
PDE6B-202ENST00000429163 COG3Q96JB2 828 aa23.62■■□□□ 1.37
PDE6B-202ENST00000429163 LAS1LQ9Y4W2 734 aaKnown RBP23.62■■□□□ 1.37
PDE6B-202ENST00000429163 GNAI1P63096 354 aa23.61■■□□□ 1.37
PDE6B-202ENST00000429163 BECN1Q14457 450 aa23.6■■□□□ 1.37
PDE6B-202ENST00000429163 NOB1Q9ULX3 412 aaKnown RBP23.6■■□□□ 1.37
PDE6B-202ENST00000429163 SMC5Q8IY18 1101 aa23.6■■□□□ 1.37
PDE6B-202ENST00000429163 ZBTB40Q9NUA8 1239 aa23.59■■□□□ 1.37
PDE6B-202ENST00000429163 PIK3R4Q99570 1358 aa23.59■■□□□ 1.37
PDE6B-202ENST00000429163 NRKQ7Z2Y5 1582 aa23.59■■□□□ 1.37
PDE6B-202ENST00000429163 MLECQ14165 292 aa23.59■■□□□ 1.37
PDE6B-202ENST00000429163 PLEKHG1Q9ULL1 1385 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms