RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 U2SURPO15042 1029 aaKnown RBP20.83■□□□□ 0.92
NPC1L1-203ENST00000423141 CHGAP10645 457 aaKnown RBP20.82■□□□□ 0.92
NPC1L1-203ENST00000423141 TMPOP42166 694 aaKnown RBP20.82■□□□□ 0.92
NPC1L1-203ENST00000423141 KIAA1211Q6ZU35 1233 aa20.82■□□□□ 0.92
NPC1L1-203ENST00000423141 NASPP49321 788 aaPredicted RBP20.81■□□□□ 0.92
NPC1L1-203ENST00000423141 PLEKHF1Q96S99 279 aa20.81■□□□□ 0.92
NPC1L1-203ENST00000423141 VWDEQ8N2E2 1590 aa20.81■□□□□ 0.92
NPC1L1-203ENST00000423141 GAS2L2Q8NHY3 880 aa20.81■□□□□ 0.92
NPC1L1-203ENST00000423141 NRXN1Q9ULB1 1477 aa20.81■□□□□ 0.92
NPC1L1-203ENST00000423141 IFT172Q9UG01 1749 aa20.8■□□□□ 0.92
NPC1L1-203ENST00000423141 TPM2P07951 284 aa20.8■□□□□ 0.92
NPC1L1-203ENST00000423141 NEURL4Q96JN8 1562 aa20.8■□□□□ 0.92
NPC1L1-203ENST00000423141 QRICH2Q9H0J4 1663 aa20.8■□□□□ 0.92
NPC1L1-203ENST00000423141 K7ELQ4 463 aaPredicted RBP20.8■□□□□ 0.92
NPC1L1-203ENST00000423141 NCBP3Q53F19 620 aaKnown RBP20.8■□□□□ 0.92
NPC1L1-203ENST00000423141 BMP2KLQ5H9B9 411 aa20.8■□□□□ 0.92
NPC1L1-203ENST00000423141 KIF1BO60333 1816 aa20.79■□□□□ 0.92
NPC1L1-203ENST00000423141 ADGRL1O94910 1474 aa20.79■□□□□ 0.92
NPC1L1-203ENST00000423141 CCDC173Q0VFZ6 552 aa20.79■□□□□ 0.92
NPC1L1-203ENST00000423141 TBC1D9Q6ZT07 1266 aa20.78■□□□□ 0.92
NPC1L1-203ENST00000423141 PPP1R9BQ96SB3 815 aa20.78■□□□□ 0.92
NPC1L1-203ENST00000423141 ANKRD45Q5TZF3 282 aa20.78■□□□□ 0.92
NPC1L1-203ENST00000423141 C1orf115Q9H7X2 142 aa20.78■□□□□ 0.92
NPC1L1-203ENST00000423141 ZC3H13Q5T200 1668 aaKnown RBP20.77■□□□□ 0.92
NPC1L1-203ENST00000423141 USP32Q8NFA0 1604 aa20.77■□□□□ 0.92
NPC1L1-203ENST00000423141 ZSCAN30Q86W11 494 aa20.76■□□□□ 0.91
NPC1L1-203ENST00000423141 DDX49Q9Y6V7 483 aaKnown RBP20.76■□□□□ 0.91
NPC1L1-203ENST00000423141 ABCC11Q96J66 1382 aa20.75■□□□□ 0.91
NPC1L1-203ENST00000423141 CFAP74Q9C0B2 1584 aa20.75■□□□□ 0.91
NPC1L1-203ENST00000423141 AK9Q5TCS8 1911 aa20.75■□□□□ 0.91
NPC1L1-203ENST00000423141 BAG4O95429 457 aaKnown RBP20.75■□□□□ 0.91
NPC1L1-203ENST00000423141 KIF16BQ96L93 1317 aa20.75■□□□□ 0.91
NPC1L1-203ENST00000423141 RIPK4P57078 832 aa20.74■□□□□ 0.91
NPC1L1-203ENST00000423141 PTMSP20962 102 aa20.74■□□□□ 0.91
NPC1L1-203ENST00000423141 C14orf93Q9H972 538 aaKnown RBP20.74■□□□□ 0.91
NPC1L1-203ENST00000423141 INO80Q9ULG1 1556 aaPredicted RBP20.74■□□□□ 0.91
NPC1L1-203ENST00000423141 MROH1Q8NDA8 1641 aa20.73■□□□□ 0.91
NPC1L1-203ENST00000423141 PPIP5K1Q6PFW1 1433 aa20.73■□□□□ 0.91
NPC1L1-203ENST00000423141 KLHL40Q2TBA0 621 aa20.73■□□□□ 0.91
NPC1L1-203ENST00000423141 CABP2Q9NPB3 220 aa20.73■□□□□ 0.91
NPC1L1-203ENST00000423141 SETBP1Q9Y6X0 1596 aa20.73■□□□□ 0.91
NPC1L1-203ENST00000423141 ATP7AQ04656 1500 aa20.73■□□□□ 0.91
NPC1L1-203ENST00000423141 IPO8O15397 1037 aaKnown RBP20.73■□□□□ 0.91
NPC1L1-203ENST00000423141 PDCL3Q9H2J4 239 aa20.73■□□□□ 0.91
NPC1L1-203ENST00000423141 GGNBP2Q9H3C7 697 aa20.73■□□□□ 0.91
NPC1L1-203ENST00000423141 ZCCHC11Q5TAX3 1644 aaKnown RBP20.73■□□□□ 0.91
NPC1L1-203ENST00000423141 ADGRB1O14514 1584 aa20.72■□□□□ 0.91
NPC1L1-203ENST00000423141 ANKRD36BQ8N2N9 1353 aa20.72■□□□□ 0.91
NPC1L1-203ENST00000423141 OFD1O75665 1012 aa20.72■□□□□ 0.91
NPC1L1-203ENST00000423141 GOLGA6L22H0YM25 854 aa20.71■□□□□ 0.91
NPC1L1-203ENST00000423141 RBM10P98175 930 aaKnown RBP20.71■□□□□ 0.91
NPC1L1-203ENST00000423141 MSNP26038 577 aaKnown RBP20.7■□□□□ 0.9
NPC1L1-203ENST00000423141 SAFB2Q14151 953 aaKnown RBP eCLIP20.7■□□□□ 0.9
NPC1L1-203ENST00000423141 CLEC17AQ6ZS10 378 aa20.7■□□□□ 0.9
NPC1L1-203ENST00000423141 ANP32BQ92688 251 aaKnown RBP20.7■□□□□ 0.9
NPC1L1-203ENST00000423141 EFCAB6Q5THR3 1501 aa20.69■□□□□ 0.9
NPC1L1-203ENST00000423141 IL16Q14005 1332 aa20.69■□□□□ 0.9
NPC1L1-203ENST00000423141 NUTM2DQ5VT03 806 aaPredicted RBP20.69■□□□□ 0.9
NPC1L1-203ENST00000423141 MCTP1Q6DN14 999 aa20.69■□□□□ 0.9
NPC1L1-203ENST00000423141 NSD2O96028 1365 aa20.69■□□□□ 0.9
NPC1L1-203ENST00000423141 ZBTB7BO15156 539 aaPredicted RBP20.69■□□□□ 0.9
NPC1L1-203ENST00000423141 NCLP19338 710 aaKnown RBP20.69■□□□□ 0.9
NPC1L1-203ENST00000423141 CAVIN1Q6NZI2 390 aaKnown RBP20.69■□□□□ 0.9
NPC1L1-203ENST00000423141 SIRT2Q8IXJ6 389 aa20.69■□□□□ 0.9
NPC1L1-203ENST00000423141 PKP1Q13835 747 aa20.68■□□□□ 0.9
NPC1L1-203ENST00000423141 TULP4Q9NRJ4 1543 aa20.68■□□□□ 0.9
NPC1L1-203ENST00000423141 PPRC1Q5VV67 1664 aaKnown RBP20.68■□□□□ 0.9
NPC1L1-203ENST00000423141 IBTKQ9P2D0 1353 aaPredicted RBP20.68■□□□□ 0.9
NPC1L1-203ENST00000423141 ADGRB3O60242 1522 aa20.68■□□□□ 0.9
NPC1L1-203ENST00000423141 CHD1O14646 1710 aa20.68■□□□□ 0.9
NPC1L1-203ENST00000423141 COL3A1P02461 1466 aaPredicted RBP20.68■□□□□ 0.9
NPC1L1-203ENST00000423141 EVC2Q86UK5 1308 aa20.67■□□□□ 0.9
NPC1L1-203ENST00000423141 ZSCAN23Q3MJ62 389 aa20.66■□□□□ 0.9
NPC1L1-203ENST00000423141 GCC1Q96CN9 775 aa20.66■□□□□ 0.9
NPC1L1-203ENST00000423141 ALDH1L2Q3SY69 923 aa20.66■□□□□ 0.9
NPC1L1-203ENST00000423141 A0A1W2PP64 1363 aa20.66■□□□□ 0.9
NPC1L1-203ENST00000423141 MED14O60244 1454 aa20.66■□□□□ 0.9
NPC1L1-203ENST00000423141 CFAP65Q6ZU64 1925 aaKnown RBP20.65■□□□□ 0.9
NPC1L1-203ENST00000423141 RBSNQ9H1K0 784 aa20.65■□□□□ 0.9
NPC1L1-203ENST00000423141 SENP3Q9H4L4 574 aaPredicted RBP20.65■□□□□ 0.9
NPC1L1-203ENST00000423141 R3HCC1Q9Y3T6 440 aaKnown RBP20.65■□□□□ 0.9
NPC1L1-203ENST00000423141 GSPT1P15170 499 aaKnown RBP20.65■□□□□ 0.9
NPC1L1-203ENST00000423141 ZNF445P59923 1031 aa20.65■□□□□ 0.9
NPC1L1-203ENST00000423141 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.65■□□□□ 0.9
NPC1L1-203ENST00000423141 LMBRD1Q9NUN5 540 aa20.64■□□□□ 0.89
NPC1L1-203ENST00000423141 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.64■□□□□ 0.89
NPC1L1-203ENST00000423141 CDC45O75419 566 aa20.63■□□□□ 0.89
NPC1L1-203ENST00000423141 XPCQ01831 940 aaPredicted RBP20.63■□□□□ 0.89
NPC1L1-203ENST00000423141 RBM27Q9P2N5 1060 aaKnown RBP20.62■□□□□ 0.89
NPC1L1-203ENST00000423141 PPLO60437 1756 aa20.62■□□□□ 0.89
NPC1L1-203ENST00000423141 PRIM1P49642 420 aaKnown RBP20.62■□□□□ 0.89
NPC1L1-203ENST00000423141 CALD1Q05682 793 aaKnown RBP20.62■□□□□ 0.89
NPC1L1-203ENST00000423141 TSPYL6Q8N831 410 aa20.62■□□□□ 0.89
NPC1L1-203ENST00000423141 CHAMP1Q96JM3 812 aa20.62■□□□□ 0.89
NPC1L1-203ENST00000423141 THUMPD2Q9BTF0 503 aaKnown RBP20.62■□□□□ 0.89
NPC1L1-203ENST00000423141 FAM13BQ9NYF5 915 aa20.62■□□□□ 0.89
NPC1L1-203ENST00000423141 ELL2O00472 640 aaPredicted RBP20.61■□□□□ 0.89
NPC1L1-203ENST00000423141 CYP2E1P05181 493 aaPredicted RBP20.6■□□□□ 0.89
NPC1L1-203ENST00000423141 FANCAO15360 1455 aa20.6■□□□□ 0.89
NPC1L1-203ENST00000423141 MRPL50Q8N5N7 158 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms