RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 COL3A1P02461 1466 aaPredicted RBP30.28■■■□□ 2.44
LSM8-203ENST00000422760 SETD1BQ9UPS6 1966 aaKnown RBP30.28■■■□□ 2.44
LSM8-203ENST00000422760 IQSEC2Q5JU85 1478 aa30.25■■■□□ 2.43
LSM8-203ENST00000422760 MSH5O43196 834 aa30.24■■■□□ 2.43
LSM8-203ENST00000422760 ERICH6Q7L0X2 663 aa30.23■■■□□ 2.43
LSM8-203ENST00000422760 GOLGA2Q08379 1002 aa30.22■■■□□ 2.43
LSM8-203ENST00000422760 NGEFQ8N5V2 710 aa30.22■■■□□ 2.43
LSM8-203ENST00000422760 NRKQ7Z2Y5 1582 aa30.21■■■□□ 2.43
LSM8-203ENST00000422760 PIK3R4Q99570 1358 aa30.21■■■□□ 2.43
LSM8-203ENST00000422760 NKTRP30414 1462 aaKnown RBP30.2■■■□□ 2.43
LSM8-203ENST00000422760 RUNDC1Q96C34 613 aa30.2■■■□□ 2.42
LSM8-203ENST00000422760 DUSP27Q5VZP5 1158 aa30.18■■■□□ 2.42
LSM8-203ENST00000422760 MAP2P11137 1827 aaKnown RBP30.17■■■□□ 2.42
LSM8-203ENST00000422760 ANKLE2Q86XL3 938 aa30.17■■■□□ 2.42
LSM8-203ENST00000422760 NME9Q86XW9 330 aa30.17■■■□□ 2.42
LSM8-203ENST00000422760 PNPLA6Q8IY17 1366 aa30.16■■■□□ 2.42
LSM8-203ENST00000422760 NUTM2FA1L443 756 aa30.15■■■□□ 2.42
LSM8-203ENST00000422760 U2AF1L5P0DN76 240 aaPredicted RBP30.15■■■□□ 2.42
LSM8-203ENST00000422760 U2AF1Q01081 240 aaKnown RBP eCLIP30.15■■■□□ 2.42
LSM8-203ENST00000422760 ZNF692Q9BU19 519 aaPredicted RBP30.15■■■□□ 2.42
LSM8-203ENST00000422760 CHD2O14647 1828 aaKnown RBP30.15■■■□□ 2.42
LSM8-203ENST00000422760 SLFN5Q08AF3 891 aa30.14■■■□□ 2.42
LSM8-203ENST00000422760 KCNA6P17658 529 aa30.14■■■□□ 2.41
LSM8-203ENST00000422760 TCERG1O14776 1098 aaKnown RBP30.13■■■□□ 2.41
LSM8-203ENST00000422760 RGPD8O14715 1765 aaPredicted RBP30.13■■■□□ 2.41
LSM8-203ENST00000422760 PLEKHG3A1L390 1219 aa30.12■■■□□ 2.41
LSM8-203ENST00000422760 TCP11L2Q8N4U5 519 aa30.12■■■□□ 2.41
LSM8-203ENST00000422760 ACEP12821 1306 aa30.11■■■□□ 2.41
LSM8-203ENST00000422760 TRMT2AQ8IZ69 625 aaKnown RBP30.1■■■□□ 2.41
LSM8-203ENST00000422760 ZRANB1Q9UGI0 708 aa30.1■■■□□ 2.41
LSM8-203ENST00000422760 WWC1Q8IX03 1113 aa30.1■■■□□ 2.41
LSM8-203ENST00000422760 SPINK5Q9NQ38 1064 aaPredicted RBP30.1■■■□□ 2.41
LSM8-203ENST00000422760 USP6P35125 1406 aa30.09■■■□□ 2.41
LSM8-203ENST00000422760 MS4A1P11836 297 aa30.09■■■□□ 2.41
LSM8-203ENST00000422760 EXOC6Q8TAG9 804 aa30.09■■■□□ 2.41
LSM8-203ENST00000422760 POLKQ9UBT6 870 aa30.09■■■□□ 2.41
LSM8-203ENST00000422760 U2SURPO15042 1029 aaKnown RBP30.08■■■□□ 2.41
LSM8-203ENST00000422760 FBLN1P23142 703 aa30.08■■■□□ 2.41
LSM8-203ENST00000422760 RRP7AQ9Y3A4 280 aaKnown RBP30.08■■■□□ 2.41
LSM8-203ENST00000422760 DMRT2Q9Y5R5 561 aa30.08■■■□□ 2.41
LSM8-203ENST00000422760 COG3Q96JB2 828 aa30.08■■■□□ 2.41
LSM8-203ENST00000422760 FMN2Q9NZ56 1722 aa30.07■■■□□ 2.4
LSM8-203ENST00000422760 E9PSI1 815 aa30.07■■■□□ 2.4
LSM8-203ENST00000422760 DIAPH1O60610 1272 aaKnown RBP30.07■■■□□ 2.4
LSM8-203ENST00000422760 AATKQ6ZMQ8 1374 aa30.07■■■□□ 2.4
LSM8-203ENST00000422760 NALCNQ8IZF0 1738 aa30.06■■■□□ 2.4
LSM8-203ENST00000422760 CDK12Q9NYV4 1490 aaPredicted RBP30.06■■■□□ 2.4
LSM8-203ENST00000422760 PHF23Q9BUL5 403 aaPredicted RBP30.06■■■□□ 2.4
LSM8-203ENST00000422760 ANP32AP39687 249 aaKnown RBP30.05■■■□□ 2.4
LSM8-203ENST00000422760 NEUROD2Q15784 382 aa30.05■■■□□ 2.4
LSM8-203ENST00000422760 TTC21BQ7Z4L5 1316 aa30.04■■■□□ 2.4
LSM8-203ENST00000422760 PPM1GO15355 546 aaPredicted RBP30.03■■■□□ 2.4
LSM8-203ENST00000422760 ANKARQ7Z5J8 1434 aa30.03■■■□□ 2.4
LSM8-203ENST00000422760 EMILIN1Q9Y6C2 1016 aa30.02■■■□□ 2.4
LSM8-203ENST00000422760 NPHP4O75161 1426 aaPredicted RBP30.02■■■□□ 2.4
LSM8-203ENST00000422760 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.02■■■□□ 2.4
LSM8-203ENST00000422760 PLEKHF1Q96S99 279 aa30.02■■■□□ 2.4
LSM8-203ENST00000422760 OVOS2A0A0J9YW53 1432 aa30.02■■■□□ 2.4
LSM8-203ENST00000422760 OVOS2Q6IE36 1432 aa30.02■■■□□ 2.4
LSM8-203ENST00000422760 CCDC27Q2M243 656 aa30.01■■■□□ 2.39
LSM8-203ENST00000422760 SSH2Q76I76 1423 aa30.01■■■□□ 2.39
LSM8-203ENST00000422760 LRRC7Q96NW7 1537 aa30■■■□□ 2.39
LSM8-203ENST00000422760 NCBP3Q53F19 620 aaKnown RBP30■■■□□ 2.39
LSM8-203ENST00000422760 PMFBP1Q8TBY8 1022 aa29.98■■■□□ 2.39
LSM8-203ENST00000422760 PLIN1O60240 522 aa29.97■■■□□ 2.39
LSM8-203ENST00000422760 NOP58Q9Y2X3 529 aaKnown RBP29.97■■■□□ 2.39
LSM8-203ENST00000422760 MAPK8IP3Q9UPT6 1336 aa29.96■■■□□ 2.39
LSM8-203ENST00000422760 WDR63Q8IWG1 891 aa29.95■■■□□ 2.39
LSM8-203ENST00000422760 RRS1Q15050 365 aaKnown RBP29.94■■■□□ 2.38
LSM8-203ENST00000422760 IPO9Q96P70 1041 aaKnown RBP29.93■■■□□ 2.38
LSM8-203ENST00000422760 NGDNQ8NEJ9 315 aaKnown RBP29.92■■■□□ 2.38
LSM8-203ENST00000422760 TTC21AQ8NDW8 1320 aa29.92■■■□□ 2.38
LSM8-203ENST00000422760 PNNQ9H307 717 aaKnown RBP29.91■■■□□ 2.38
LSM8-203ENST00000422760 PIK3C2AO00443 1686 aa29.91■■■□□ 2.38
LSM8-203ENST00000422760 TMPOP42166 694 aaKnown RBP29.9■■■□□ 2.38
LSM8-203ENST00000422760 NWD1Q149M9 1564 aa29.9■■■□□ 2.38
LSM8-203ENST00000422760 FCHSD2O94868 740 aa29.9■■■□□ 2.38
LSM8-203ENST00000422760 ADGRL3Q9HAR2 1447 aa29.9■■■□□ 2.38
LSM8-203ENST00000422760 USP31Q70CQ4 1352 aa29.89■■■□□ 2.38
LSM8-203ENST00000422760 IL13P35225 146 aa29.89■■■□□ 2.38
LSM8-203ENST00000422760 RSPH6AQ9H0K4 717 aa29.89■■■□□ 2.38
LSM8-203ENST00000422760 CRBNQ96SW2 442 aa29.87■■■□□ 2.37
LSM8-203ENST00000422760 PEAK1Q9H792 1746 aa29.87■■■□□ 2.37
LSM8-203ENST00000422760 RBM33Q96EV2 1170 aaKnown RBP29.86■■■□□ 2.37
LSM8-203ENST00000422760 PRKAR2BP31323 418 aa29.85■■■□□ 2.37
LSM8-203ENST00000422760 TRIM35Q9UPQ4 493 aa29.84■■■□□ 2.37
LSM8-203ENST00000422760 C20orf194Q5TEA3 1177 aa29.83■■■□□ 2.37
LSM8-203ENST00000422760 HMOX1P09601 288 aa29.83■■■□□ 2.37
LSM8-203ENST00000422760 MARF1Q9Y4F3 1742 aaKnown RBP29.82■■■□□ 2.36
LSM8-203ENST00000422760 CENPQQ7L2Z9 268 aaPredicted RBP29.82■■■□□ 2.36
LSM8-203ENST00000422760 USP54Q70EL1 1684 aa29.82■■■□□ 2.36
LSM8-203ENST00000422760 BACH2Q9BYV9 841 aa29.81■■■□□ 2.36
LSM8-203ENST00000422760 MYH16Q9H6N6 1097 aa29.81■■■□□ 2.36
LSM8-203ENST00000422760 PDE4AP27815 886 aa29.8■■■□□ 2.36
LSM8-203ENST00000422760 RIPK4P57078 832 aa29.8■■■□□ 2.36
LSM8-203ENST00000422760 BCAR3O75815 825 aa29.79■■■□□ 2.36
LSM8-203ENST00000422760 NEFMP07197 916 aa29.79■■■□□ 2.36
LSM8-203ENST00000422760 ZBTB47Q9UFB7 747 aaPredicted RBP29.79■■■□□ 2.36
LSM8-203ENST00000422760 KDM2BQ8NHM5 1336 aa29.77■■■□□ 2.36
LSM8-203ENST00000422760 RGPD1P0DJD0 1748 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms