RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 TRIM27P14373 513 aa17.55■□□□□ 0.4
CTCFL-203ENST00000422109 ZC3H13Q5T200 1668 aaKnown RBP17.55■□□□□ 0.4
CTCFL-203ENST00000422109 FAM69CQ0P6D2 419 aa17.55■□□□□ 0.4
CTCFL-203ENST00000422109 CCDC27Q2M243 656 aa17.54■□□□□ 0.4
CTCFL-203ENST00000422109 PLEKHF1Q96S99 279 aa17.54■□□□□ 0.4
CTCFL-203ENST00000422109 ZRANB1Q9UGI0 708 aa17.54■□□□□ 0.4
CTCFL-203ENST00000422109 NCKAP5LQ9HCH0 1330 aa17.54■□□□□ 0.4
CTCFL-203ENST00000422109 ARHGEF28Q8N1W1 1705 aaKnown RBP17.53■□□□□ 0.4
CTCFL-203ENST00000422109 PRKAR2BP31323 418 aa17.53■□□□□ 0.4
CTCFL-203ENST00000422109 NINLQ9Y2I6 1382 aa17.53■□□□□ 0.4
CTCFL-203ENST00000422109 GSE1Q14687 1217 aa17.52■□□□□ 0.4
CTCFL-203ENST00000422109 MFAP1P55081 439 aaKnown RBP17.52■□□□□ 0.4
CTCFL-203ENST00000422109 TMEM57Q8N5G2 664 aa17.52■□□□□ 0.4
CTCFL-203ENST00000422109 ARXQ96QS3 562 aa17.52■□□□□ 0.4
CTCFL-203ENST00000422109 ABCC11Q96J66 1382 aa17.52■□□□□ 0.39
CTCFL-203ENST00000422109 NUTM2FA1L443 756 aa17.52■□□□□ 0.39
CTCFL-203ENST00000422109 UPF2Q9HAU5 1272 aaKnown RBP17.52■□□□□ 0.39
CTCFL-203ENST00000422109 MYO5BQ9ULV0 1848 aa17.52■□□□□ 0.39
CTCFL-203ENST00000422109 DIP2CQ9Y2E4 1556 aa17.51■□□□□ 0.39
CTCFL-203ENST00000422109 BRPF3Q9ULD4 1205 aa17.51■□□□□ 0.39
CTCFL-203ENST00000422109 PLPPR3Q6T4P5 718 aa17.51■□□□□ 0.39
CTCFL-203ENST00000422109 YTHDC2Q9H6S0 1430 aaKnown RBP17.5■□□□□ 0.39
CTCFL-203ENST00000422109 EMILIN1Q9Y6C2 1016 aa17.5■□□□□ 0.39
CTCFL-203ENST00000422109 PIK3C2BO00750 1634 aa17.5■□□□□ 0.39
CTCFL-203ENST00000422109 NSD2O96028 1365 aa17.5■□□□□ 0.39
CTCFL-203ENST00000422109 CFAP74Q9C0B2 1584 aa17.5■□□□□ 0.39
CTCFL-203ENST00000422109 ATF7IPQ6VMQ6 1270 aa17.49■□□□□ 0.39
CTCFL-203ENST00000422109 PHACTR3Q96KR7 559 aa17.49■□□□□ 0.39
CTCFL-203ENST00000422109 C1orf115Q9H7X2 142 aa17.49■□□□□ 0.39
CTCFL-203ENST00000422109 ATAD2Q6PL18 1390 aa17.48■□□□□ 0.39
CTCFL-203ENST00000422109 TXNDC2Q86VQ3 553 aa17.48■□□□□ 0.39
CTCFL-203ENST00000422109 SOX12O15370 315 aa17.48■□□□□ 0.39
CTCFL-203ENST00000422109 NME9Q86XW9 330 aa17.48■□□□□ 0.39
CTCFL-203ENST00000422109 BECN1Q14457 450 aa17.47■□□□□ 0.39
CTCFL-203ENST00000422109 RRS1Q15050 365 aaKnown RBP17.47■□□□□ 0.39
CTCFL-203ENST00000422109 PUS7Q96PZ0 661 aaKnown RBP17.46■□□□□ 0.39
CTCFL-203ENST00000422109 NEO1Q92859 1461 aa17.46■□□□□ 0.39
CTCFL-203ENST00000422109 LNPKQ9C0E8 428 aa17.46■□□□□ 0.39
CTCFL-203ENST00000422109 POLKQ9UBT6 870 aa17.46■□□□□ 0.39
CTCFL-203ENST00000422109 PTPRMP28827 1452 aa17.45■□□□□ 0.38
CTCFL-203ENST00000422109 DDX19BQ9UMR2 479 aa17.45■□□□□ 0.38
CTCFL-203ENST00000422109 DCTN1Q14203 1278 aa17.44■□□□□ 0.38
CTCFL-203ENST00000422109 TSPYL6Q8N831 410 aa17.44■□□□□ 0.38
CTCFL-203ENST00000422109 CD163L1Q9NR16 1453 aa17.43■□□□□ 0.38
CTCFL-203ENST00000422109 FAM83GA6ND36 823 aa17.43■□□□□ 0.38
CTCFL-203ENST00000422109 TBC1D2Q9BYX2 928 aa17.43■□□□□ 0.38
CTCFL-203ENST00000422109 TBC1D32Q96NH3 1257 aa17.42■□□□□ 0.38
CTCFL-203ENST00000422109 RSPH6AQ9H0K4 717 aa17.41■□□□□ 0.38
CTCFL-203ENST00000422109 USP32Q8NFA0 1604 aa17.41■□□□□ 0.38
CTCFL-203ENST00000422109 ARHGAP31Q2M1Z3 1444 aa17.41■□□□□ 0.38
CTCFL-203ENST00000422109 TSPOAP1O95153 1857 aa17.4■□□□□ 0.38
CTCFL-203ENST00000422109 ESF1Q9H501 851 aaKnown RBP17.4■□□□□ 0.38
CTCFL-203ENST00000422109 FCHSD2O94868 740 aa17.4■□□□□ 0.38
CTCFL-203ENST00000422109 IPO8O15397 1037 aaKnown RBP17.39■□□□□ 0.37
CTCFL-203ENST00000422109 C22orf23Q9BZE7 217 aa17.39■□□□□ 0.37
CTCFL-203ENST00000422109 COL3A1P02461 1466 aaPredicted RBP17.39■□□□□ 0.37
CTCFL-203ENST00000422109 TMEM131LA2VDJ0 1609 aa17.38■□□□□ 0.37
CTCFL-203ENST00000422109 PNNQ9H307 717 aaKnown RBP17.38■□□□□ 0.37
CTCFL-203ENST00000422109 PREX1Q8TCU6 1659 aa17.38■□□□□ 0.37
CTCFL-203ENST00000422109 AAMPQ13685 434 aa17.38■□□□□ 0.37
CTCFL-203ENST00000422109 ANKRD45Q5TZF3 282 aa17.38■□□□□ 0.37
CTCFL-203ENST00000422109 ZBTB40Q9NUA8 1239 aa17.38■□□□□ 0.37
CTCFL-203ENST00000422109 ALKQ9UM73 1620 aa17.38■□□□□ 0.37
CTCFL-203ENST00000422109 RICTORQ6R327 1708 aa17.37■□□□□ 0.37
CTCFL-203ENST00000422109 CT47B1P0C2W7 299 aaPredicted RBP17.37■□□□□ 0.37
CTCFL-203ENST00000422109 KIF16BQ96L93 1317 aa17.37■□□□□ 0.37
CTCFL-203ENST00000422109 ADGRB2O60241 1585 aa17.36■□□□□ 0.37
CTCFL-203ENST00000422109 NLRP1Q9C000 1473 aa17.36■□□□□ 0.37
CTCFL-203ENST00000422109 ZFYVE9O95405 1425 aa17.36■□□□□ 0.37
CTCFL-203ENST00000422109 NFE2L2Q16236 605 aa17.36■□□□□ 0.37
CTCFL-203ENST00000422109 GZF1Q9H116 711 aaPredicted RBP17.36■□□□□ 0.37
CTCFL-203ENST00000422109 NUDT16Q96DE0 195 aaKnown RBP17.36■□□□□ 0.37
CTCFL-203ENST00000422109 MBIPQ9NS73 344 aa17.35■□□□□ 0.37
CTCFL-203ENST00000422109 WASLO00401 505 aaPredicted RBP17.35■□□□□ 0.37
CTCFL-203ENST00000422109 COG3Q96JB2 828 aa17.35■□□□□ 0.37
CTCFL-203ENST00000422109 HDAC1Q13547 482 aaPredicted RBP17.34■□□□□ 0.37
CTCFL-203ENST00000422109 KRT24Q2M2I5 525 aa17.34■□□□□ 0.37
CTCFL-203ENST00000422109 RIMS2Q9UQ26 1411 aa17.34■□□□□ 0.37
CTCFL-203ENST00000422109 C8orf58Q8NAV2 365 aa17.34■□□□□ 0.37
CTCFL-203ENST00000422109 FOXD4L1Q9NU39 408 aa17.34■□□□□ 0.37
CTCFL-203ENST00000422109 ARHGEF40Q8TER5 1519 aa17.34■□□□□ 0.37
CTCFL-203ENST00000422109 APBB1O00213 710 aa17.34■□□□□ 0.37
CTCFL-203ENST00000422109 VAMP4O75379 141 aa17.34■□□□□ 0.37
CTCFL-203ENST00000422109 AEBP1Q8IUX7 1158 aa17.34■□□□□ 0.37
CTCFL-203ENST00000422109 LRRC7Q96NW7 1537 aa17.34■□□□□ 0.37
CTCFL-203ENST00000422109 METP08581 1390 aa17.33■□□□□ 0.37
CTCFL-203ENST00000422109 IL16Q14005 1332 aa17.33■□□□□ 0.37
CTCFL-203ENST00000422109 PPIP5K1Q6PFW1 1433 aa17.33■□□□□ 0.37
CTCFL-203ENST00000422109 TWISTNBQ3B726 338 aaPredicted RBP17.32■□□□□ 0.36
CTCFL-203ENST00000422109 SMC5Q8IY18 1101 aa17.32■□□□□ 0.36
CTCFL-203ENST00000422109 IL13P35225 146 aa17.32■□□□□ 0.36
CTCFL-203ENST00000422109 CHD1LQ86WJ1 897 aa17.31■□□□□ 0.36
CTCFL-203ENST00000422109 VIRMAQ69YN4 1812 aaKnown RBP17.31■□□□□ 0.36
CTCFL-203ENST00000422109 PNPLA6Q8IY17 1366 aa17.31■□□□□ 0.36
CTCFL-203ENST00000422109 MRPL50Q8N5N7 158 aaKnown RBP17.31■□□□□ 0.36
CTCFL-203ENST00000422109 ANTXR1Q9H6X2 564 aa17.3■□□□□ 0.36
CTCFL-203ENST00000422109 GNAI1P63096 354 aa17.29■□□□□ 0.36
CTCFL-203ENST00000422109 ALDH1L2Q3SY69 923 aa17.29■□□□□ 0.36
CTCFL-203ENST00000422109 SULT6B1Q6IMI4 303 aa17.29■□□□□ 0.36
CTCFL-203ENST00000422109 NUCB1Q02818 461 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms