RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 JCADQ9P266 1359 aa19.36■□□□□ 0.69
SHMT1P1-201ENST00000419974 BRINP3Q76B58 766 aa19.36■□□□□ 0.69
SHMT1P1-201ENST00000419974 NLRP13Q86W25 1043 aa19.36■□□□□ 0.69
SHMT1P1-201ENST00000419974 AHDC1Q5TGY3 1603 aaPredicted RBP19.36■□□□□ 0.69
SHMT1P1-201ENST00000419974 C1orf167Q5SNV9 1468 aa19.36■□□□□ 0.69
SHMT1P1-201ENST00000419974 MST1RQ04912 1400 aa19.35■□□□□ 0.69
SHMT1P1-201ENST00000419974 FYB1O15117 783 aa19.35■□□□□ 0.69
SHMT1P1-201ENST00000419974 COL16A1Q07092 1604 aaPredicted RBP19.34■□□□□ 0.69
SHMT1P1-201ENST00000419974 TTC21AQ8NDW8 1320 aa19.34■□□□□ 0.69
SHMT1P1-201ENST00000419974 NRKQ7Z2Y5 1582 aa19.34■□□□□ 0.69
SHMT1P1-201ENST00000419974 CC2D1BQ5T0F9 858 aaKnown RBP19.34■□□□□ 0.69
SHMT1P1-201ENST00000419974 PHF8Q9UPP1 1060 aa19.34■□□□□ 0.69
SHMT1P1-201ENST00000419974 KIF1AQ12756 1690 aa19.31■□□□□ 0.68
SHMT1P1-201ENST00000419974 SPATA31A6Q5VVP1 1343 aa19.31■□□□□ 0.68
SHMT1P1-201ENST00000419974 TTC21BQ7Z4L5 1316 aa19.31■□□□□ 0.68
SHMT1P1-201ENST00000419974 NGDNQ8NEJ9 315 aaKnown RBP19.3■□□□□ 0.68
SHMT1P1-201ENST00000419974 RGS17Q9UGC6 210 aaPredicted RBP19.3■□□□□ 0.68
SHMT1P1-201ENST00000419974 USP31Q70CQ4 1352 aa19.3■□□□□ 0.68
SHMT1P1-201ENST00000419974 PPP2R1AP30153 589 aa19.29■□□□□ 0.68
SHMT1P1-201ENST00000419974 ANKRD26Q9UPS8 1709 aa19.29■□□□□ 0.68
SHMT1P1-201ENST00000419974 RGPD8O14715 1765 aaPredicted RBP19.28■□□□□ 0.68
SHMT1P1-201ENST00000419974 NUTM2FA1L443 756 aa19.28■□□□□ 0.68
SHMT1P1-201ENST00000419974 MORC1Q86VD1 984 aa19.28■□□□□ 0.68
SHMT1P1-201ENST00000419974 INSRP06213 1382 aa19.28■□□□□ 0.68
SHMT1P1-201ENST00000419974 ESCO1Q5FWF5 840 aa19.27■□□□□ 0.68
SHMT1P1-201ENST00000419974 AATKQ6ZMQ8 1374 aa19.27■□□□□ 0.68
SHMT1P1-201ENST00000419974 PMFBP1Q8TBY8 1022 aa19.26■□□□□ 0.67
SHMT1P1-201ENST00000419974 SHPRHQ149N8 1683 aa19.26■□□□□ 0.67
SHMT1P1-201ENST00000419974 USP54Q70EL1 1684 aa19.26■□□□□ 0.67
SHMT1P1-201ENST00000419974 LRRC59Q96AG4 307 aaKnown RBP19.25■□□□□ 0.67
SHMT1P1-201ENST00000419974 KIF20BQ96Q89 1820 aa19.25■□□□□ 0.67
SHMT1P1-201ENST00000419974 NHSL1Q5SYE7 1610 aa19.25■□□□□ 0.67
SHMT1P1-201ENST00000419974 OVOS2A0A0J9YW53 1432 aa19.25■□□□□ 0.67
SHMT1P1-201ENST00000419974 OVOS2Q6IE36 1432 aa19.25■□□□□ 0.67
SHMT1P1-201ENST00000419974 ORAI2Q96SN7 254 aa19.25■□□□□ 0.67
SHMT1P1-201ENST00000419974 MRS2Q9HD23 443 aa19.25■□□□□ 0.67
SHMT1P1-201ENST00000419974 PNISRQ8TF01 805 aaKnown RBP19.24■□□□□ 0.67
SHMT1P1-201ENST00000419974 GGNBP2Q9H3C7 697 aa19.24■□□□□ 0.67
SHMT1P1-201ENST00000419974 CCDC184Q52MB2 194 aa19.23■□□□□ 0.67
SHMT1P1-201ENST00000419974 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.22■□□□□ 0.67
SHMT1P1-201ENST00000419974 COG3Q96JB2 828 aa19.22■□□□□ 0.67
SHMT1P1-201ENST00000419974 SBNO1A3KN83 1393 aa19.21■□□□□ 0.67
SHMT1P1-201ENST00000419974 SMG6Q86US8 1419 aaKnown RBP19.21■□□□□ 0.67
SHMT1P1-201ENST00000419974 PSME1Q06323 249 aa19.21■□□□□ 0.67
SHMT1P1-201ENST00000419974 NME9Q86XW9 330 aa19.21■□□□□ 0.67
SHMT1P1-201ENST00000419974 NPHP3Q7Z494 1330 aa19.2■□□□□ 0.66
SHMT1P1-201ENST00000419974 PNPLA6Q8IY17 1366 aa19.2■□□□□ 0.66
SHMT1P1-201ENST00000419974 SOS2Q07890 1332 aaPredicted RBP19.2■□□□□ 0.66
SHMT1P1-201ENST00000419974 FOXO3O43524 673 aa19.18■□□□□ 0.66
SHMT1P1-201ENST00000419974 POTEAQ6S8J7 498 aa19.18■□□□□ 0.66
SHMT1P1-201ENST00000419974 LRP6O75581 1613 aa19.18■□□□□ 0.66
SHMT1P1-201ENST00000419974 PIK3C2AO00443 1686 aa19.17■□□□□ 0.66
SHMT1P1-201ENST00000419974 DDX17Q92841 729 aaKnown RBP19.17■□□□□ 0.66
SHMT1P1-201ENST00000419974 TRPM3Q9HCF6 1732 aaPredicted RBP19.17■□□□□ 0.66
SHMT1P1-201ENST00000419974 KIF24Q5T7B8 1368 aa19.17■□□□□ 0.66
SHMT1P1-201ENST00000419974 KRT28Q7Z3Y7 464 aa19.16■□□□□ 0.66
SHMT1P1-201ENST00000419974 MTHFSP49914 203 aa19.15■□□□□ 0.66
SHMT1P1-201ENST00000419974 CNGB1Q14028 1251 aaPredicted RBP19.15■□□□□ 0.66
SHMT1P1-201ENST00000419974 ZNF772Q68DY9 489 aaPredicted RBP19.15■□□□□ 0.66
SHMT1P1-201ENST00000419974 PXDNQ92626 1479 aa19.15■□□□□ 0.66
SHMT1P1-201ENST00000419974 MEX3CQ5U5Q3 659 aaKnown RBP19.14■□□□□ 0.65
SHMT1P1-201ENST00000419974 POLKQ9UBT6 870 aa19.14■□□□□ 0.65
SHMT1P1-201ENST00000419974 ABTB2Q8N961 1025 aa19.13■□□□□ 0.65
SHMT1P1-201ENST00000419974 CFAP53Q96M91 514 aa19.13■□□□□ 0.65
SHMT1P1-201ENST00000419974 USP19O94966 1318 aa19.12■□□□□ 0.65
SHMT1P1-201ENST00000419974 CDK12Q9NYV4 1490 aaPredicted RBP19.11■□□□□ 0.65
SHMT1P1-201ENST00000419974 NLRP6P59044 892 aa19.11■□□□□ 0.65
SHMT1P1-201ENST00000419974 KCNH5Q8NCM2 988 aa19.11■□□□□ 0.65
SHMT1P1-201ENST00000419974 ZRANB1Q9UGI0 708 aa19.11■□□□□ 0.65
SHMT1P1-201ENST00000419974 COL3A1P02461 1466 aaPredicted RBP19.11■□□□□ 0.65
SHMT1P1-201ENST00000419974 ALS2Q96Q42 1657 aa19.1■□□□□ 0.65
SHMT1P1-201ENST00000419974 NUTM2BA6NNL0 878 aaPredicted RBP19.1■□□□□ 0.65
SHMT1P1-201ENST00000419974 NUTM2EB1AL46 878 aaPredicted RBP19.1■□□□□ 0.65
SHMT1P1-201ENST00000419974 NUTM2AQ8IVF1 878 aaPredicted RBP19.1■□□□□ 0.65
SHMT1P1-201ENST00000419974 SLIT3O75094 1523 aa19.1■□□□□ 0.65
SHMT1P1-201ENST00000419974 MARF1Q9Y4F3 1742 aaKnown RBP19.1■□□□□ 0.65
SHMT1P1-201ENST00000419974 ARHGEF10O15013 1369 aa19.09■□□□□ 0.65
SHMT1P1-201ENST00000419974 SPATA31A3Q5VYP0 1347 aa19.09■□□□□ 0.65
SHMT1P1-201ENST00000419974 TNS3Q68CZ2 1445 aa19.09■□□□□ 0.65
SHMT1P1-201ENST00000419974 PAK3O75914 559 aaPredicted RBP19.08■□□□□ 0.65
SHMT1P1-201ENST00000419974 TNNT2P45379 298 aaPredicted RBP19.08■□□□□ 0.65
SHMT1P1-201ENST00000419974 BLMP54132 1417 aaPredicted RBP19.06■□□□□ 0.64
SHMT1P1-201ENST00000419974 RTL1A6NKG5 1358 aa19.06■□□□□ 0.64
SHMT1P1-201ENST00000419974 NFAT5O94916 1531 aa19.06■□□□□ 0.64
SHMT1P1-201ENST00000419974 PHRF1Q9P1Y6 1649 aaKnown RBP19.06■□□□□ 0.64
SHMT1P1-201ENST00000419974 FAM9BQ8IZU0 186 aa19.05■□□□□ 0.64
SHMT1P1-201ENST00000419974 COL22A1Q8NFW1 1626 aaPredicted RBP19.05■□□□□ 0.64
SHMT1P1-201ENST00000419974 WDR43Q15061 677 aaKnown RBP eCLIP19.04■□□□□ 0.64
SHMT1P1-201ENST00000419974 NCBP3Q53F19 620 aaKnown RBP19.04■□□□□ 0.64
SHMT1P1-201ENST00000419974 NUDCQ9Y266 331 aa19.03■□□□□ 0.64
SHMT1P1-201ENST00000419974 FLT4P35916 1363 aa19.03■□□□□ 0.64
SHMT1P1-201ENST00000419974 AFF2P51816 1311 aa19.03■□□□□ 0.64
SHMT1P1-201ENST00000419974 MAP2P11137 1827 aaKnown RBP19.03■□□□□ 0.64
SHMT1P1-201ENST00000419974 DIAPH1O60610 1272 aaKnown RBP19.02■□□□□ 0.64
SHMT1P1-201ENST00000419974 GCP02774 474 aa19.02■□□□□ 0.64
SHMT1P1-201ENST00000419974 NGEFQ8N5V2 710 aa19.02■□□□□ 0.64
SHMT1P1-201ENST00000419974 ADAMTS8Q9UP79 889 aa19.02■□□□□ 0.64
SHMT1P1-201ENST00000419974 EMILIN1Q9Y6C2 1016 aa19.02■□□□□ 0.64
SHMT1P1-201ENST00000419974 MAP3K19Q56UN5 1328 aa19.02■□□□□ 0.64
SHMT1P1-201ENST00000419974 RXRBP28702 533 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms