RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 AKAP12Q02952 1782 aa25.5■■□□□ 1.67
SEMA3B-202ENST00000418576 TNS3Q68CZ2 1445 aa25.49■■□□□ 1.67
SEMA3B-202ENST00000418576 ZNF316A6NFI3 1004 aaPredicted RBP25.49■■□□□ 1.67
SEMA3B-202ENST00000418576 PANK3Q9H999 370 aa25.49■■□□□ 1.67
SEMA3B-202ENST00000418576 EDC4Q6P2E9 1401 aaKnown RBP25.48■■□□□ 1.67
SEMA3B-202ENST00000418576 ARHGEF10O15013 1369 aa25.48■■□□□ 1.67
SEMA3B-202ENST00000418576 JCADQ9P266 1359 aa25.48■■□□□ 1.67
SEMA3B-202ENST00000418576 ABTB2Q8N961 1025 aa25.47■■□□□ 1.67
SEMA3B-202ENST00000418576 TTC21BQ7Z4L5 1316 aa25.47■■□□□ 1.67
SEMA3B-202ENST00000418576 TTC21AQ8NDW8 1320 aa25.47■■□□□ 1.67
SEMA3B-202ENST00000418576 SSH2Q76I76 1423 aa25.47■■□□□ 1.67
SEMA3B-202ENST00000418576 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.46■■□□□ 1.67
SEMA3B-202ENST00000418576 MON2Q7Z3U7 1717 aa25.46■■□□□ 1.67
SEMA3B-202ENST00000418576 TRPM3Q9HCF6 1732 aaPredicted RBP25.46■■□□□ 1.67
SEMA3B-202ENST00000418576 CARD14Q9BXL6 1004 aa25.44■■□□□ 1.66
SEMA3B-202ENST00000418576 PNPLA6Q8IY17 1366 aa25.42■■□□□ 1.66
SEMA3B-202ENST00000418576 NSD3Q9BZ95 1437 aa25.41■■□□□ 1.66
SEMA3B-202ENST00000418576 NLRP13Q86W25 1043 aa25.41■■□□□ 1.66
SEMA3B-202ENST00000418576 NRKQ7Z2Y5 1582 aa25.41■■□□□ 1.66
SEMA3B-202ENST00000418576 KNSTRNQ9Y448 316 aa25.4■■□□□ 1.66
SEMA3B-202ENST00000418576 NLRP6P59044 892 aa25.39■■□□□ 1.66
SEMA3B-202ENST00000418576 NUTM2GQ5VZR2 741 aa25.39■■□□□ 1.66
SEMA3B-202ENST00000418576 ALS2Q96Q42 1657 aa25.39■■□□□ 1.66
SEMA3B-202ENST00000418576 CGNL1Q0VF96 1302 aa25.38■■□□□ 1.65
SEMA3B-202ENST00000418576 SPATA31A6Q5VVP1 1343 aa25.38■■□□□ 1.65
SEMA3B-202ENST00000418576 SHPRHQ149N8 1683 aa25.38■■□□□ 1.65
SEMA3B-202ENST00000418576 NME9Q86XW9 330 aa25.37■■□□□ 1.65
SEMA3B-202ENST00000418576 PLEKHG5O94827 1062 aa25.36■■□□□ 1.65
SEMA3B-202ENST00000418576 HAP1P54257 671 aaPredicted RBP25.36■■□□□ 1.65
SEMA3B-202ENST00000418576 FYB1O15117 783 aa25.34■■□□□ 1.65
SEMA3B-202ENST00000418576 DDX10Q13206 875 aaKnown RBP25.34■■□□□ 1.65
SEMA3B-202ENST00000418576 COL22A1Q8NFW1 1626 aaPredicted RBP25.34■■□□□ 1.65
SEMA3B-202ENST00000418576 PIK3C2AO00443 1686 aa25.33■■□□□ 1.65
SEMA3B-202ENST00000418576 USP31Q70CQ4 1352 aa25.33■■□□□ 1.65
SEMA3B-202ENST00000418576 PER1O15534 1290 aaPredicted RBP25.33■■□□□ 1.65
SEMA3B-202ENST00000418576 CABLES1Q8TDN4 633 aa25.33■■□□□ 1.65
SEMA3B-202ENST00000418576 COG3Q96JB2 828 aa25.33■■□□□ 1.65
SEMA3B-202ENST00000418576 NUTM2BA6NNL0 878 aaPredicted RBP25.32■■□□□ 1.64
SEMA3B-202ENST00000418576 NUTM2EB1AL46 878 aaPredicted RBP25.32■■□□□ 1.64
SEMA3B-202ENST00000418576 NUTM2AQ8IVF1 878 aaPredicted RBP25.32■■□□□ 1.64
SEMA3B-202ENST00000418576 GGNBP2Q9H3C7 697 aa25.31■■□□□ 1.64
SEMA3B-202ENST00000418576 ZRANB1Q9UGI0 708 aa25.31■■□□□ 1.64
SEMA3B-202ENST00000418576 MED1Q15648 1581 aaPredicted RBP25.3■■□□□ 1.64
SEMA3B-202ENST00000418576 USP19O94966 1318 aa25.3■■□□□ 1.64
SEMA3B-202ENST00000418576 KCNH5Q8NCM2 988 aa25.29■■□□□ 1.64
SEMA3B-202ENST00000418576 NSD2O96028 1365 aa25.28■■□□□ 1.64
SEMA3B-202ENST00000418576 GCP02774 474 aa25.28■■□□□ 1.64
SEMA3B-202ENST00000418576 OVOS2A0A0J9YW53 1432 aa25.26■■□□□ 1.63
SEMA3B-202ENST00000418576 OVOS2Q6IE36 1432 aa25.26■■□□□ 1.63
SEMA3B-202ENST00000418576 AMER1Q5JTC6 1135 aaPredicted RBP25.26■■□□□ 1.63
SEMA3B-202ENST00000418576 KIF20BQ96Q89 1820 aa25.25■■□□□ 1.63
SEMA3B-202ENST00000418576 ADAMTS2O95450 1211 aa25.24■■□□□ 1.63
SEMA3B-202ENST00000418576 MEX3CQ5U5Q3 659 aaKnown RBP25.24■■□□□ 1.63
SEMA3B-202ENST00000418576 SOX12O15370 315 aa25.23■■□□□ 1.63
SEMA3B-202ENST00000418576 SLIT3O75094 1523 aa25.23■■□□□ 1.63
SEMA3B-202ENST00000418576 USP54Q70EL1 1684 aa25.23■■□□□ 1.63
SEMA3B-202ENST00000418576 NPC1L1Q9UHC9 1359 aa25.22■■□□□ 1.63
SEMA3B-202ENST00000418576 CC2D1BQ5T0F9 858 aaKnown RBP25.21■■□□□ 1.63
SEMA3B-202ENST00000418576 PHRF1Q9P1Y6 1649 aaKnown RBP25.21■■□□□ 1.63
SEMA3B-202ENST00000418576 CRYBG1Q9Y4K1 1723 aa25.21■■□□□ 1.63
SEMA3B-202ENST00000418576 ZC3H6P61129 1189 aaKnown RBP25.21■■□□□ 1.63
SEMA3B-202ENST00000418576 MORC1Q86VD1 984 aa25.21■■□□□ 1.63
SEMA3B-202ENST00000418576 LRP6O75581 1613 aa25.2■■□□□ 1.63
SEMA3B-202ENST00000418576 ABCA3Q99758 1704 aa25.2■■□□□ 1.63
SEMA3B-202ENST00000418576 MARF1Q9Y4F3 1742 aaKnown RBP25.19■■□□□ 1.62
SEMA3B-202ENST00000418576 PRDM11Q9NQV5 511 aa25.18■■□□□ 1.62
SEMA3B-202ENST00000418576 CPDO75976 1380 aa25.18■■□□□ 1.62
SEMA3B-202ENST00000418576 CNGB1Q14028 1251 aaPredicted RBP25.18■■□□□ 1.62
SEMA3B-202ENST00000418576 KIAA0232Q92628 1395 aa25.17■■□□□ 1.62
SEMA3B-202ENST00000418576 C8orf37Q96NL8 207 aa25.17■■□□□ 1.62
SEMA3B-202ENST00000418576 NGLY1Q96IV0 654 aa25.16■■□□□ 1.62
SEMA3B-202ENST00000418576 ZBTB7CA1YPR0 619 aa25.15■■□□□ 1.62
SEMA3B-202ENST00000418576 ARHGEF25Q86VW2 580 aa25.15■■□□□ 1.62
SEMA3B-202ENST00000418576 ANKRD26Q9UPS8 1709 aa25.14■■□□□ 1.62
SEMA3B-202ENST00000418576 FAM83GA6ND36 823 aa25.14■■□□□ 1.62
SEMA3B-202ENST00000418576 TNNT2P45379 298 aaPredicted RBP25.14■■□□□ 1.62
SEMA3B-202ENST00000418576 NFAT5O94916 1531 aa25.14■■□□□ 1.61
SEMA3B-202ENST00000418576 AATKQ6ZMQ8 1374 aa25.12■■□□□ 1.61
SEMA3B-202ENST00000418576 FBLN1P23142 703 aa25.11■■□□□ 1.61
SEMA3B-202ENST00000418576 CHRNA2Q15822 529 aa25.11■■□□□ 1.61
SEMA3B-202ENST00000418576 RRS1Q15050 365 aaKnown RBP25.1■■□□□ 1.61
SEMA3B-202ENST00000418576 MAP3K19Q56UN5 1328 aa25.09■■□□□ 1.61
SEMA3B-202ENST00000418576 AMPHP49418 695 aa25.09■■□□□ 1.61
SEMA3B-202ENST00000418576 FNBP4Q8N3X1 1017 aaPredicted RBP25.08■■□□□ 1.61
SEMA3B-202ENST00000418576 COL14A1Q05707 1796 aaKnown RBP25.07■■□□□ 1.6
SEMA3B-202ENST00000418576 BTG4Q9NY30 223 aa25.07■■□□□ 1.6
SEMA3B-202ENST00000418576 PHF23Q9BUL5 403 aaPredicted RBP25.06■■□□□ 1.6
SEMA3B-202ENST00000418576 PPM1GO15355 546 aaPredicted RBP25.05■■□□□ 1.6
SEMA3B-202ENST00000418576 POLKQ9UBT6 870 aa25.05■■□□□ 1.6
SEMA3B-202ENST00000418576 KIF24Q5T7B8 1368 aa25.05■■□□□ 1.6
SEMA3B-202ENST00000418576 AFF2P51816 1311 aa25.05■■□□□ 1.6
SEMA3B-202ENST00000418576 RALBP1Q15311 655 aa25.05■■□□□ 1.6
SEMA3B-202ENST00000418576 IP6K1Q92551 441 aa25.05■■□□□ 1.6
SEMA3B-202ENST00000418576 USP21Q9UK80 565 aa25.05■■□□□ 1.6
SEMA3B-202ENST00000418576 EMILIN1Q9Y6C2 1016 aa25.04■■□□□ 1.6
SEMA3B-202ENST00000418576 RTL1A6NKG5 1358 aa25.04■■□□□ 1.6
SEMA3B-202ENST00000418576 SLIT2O94813 1529 aa25.04■■□□□ 1.6
SEMA3B-202ENST00000418576 LTN1O94822 1766 aa25.03■■□□□ 1.6
SEMA3B-202ENST00000418576 EVA1CP58658 441 aa25.03■■□□□ 1.6
SEMA3B-202ENST00000418576 ZNF772Q68DY9 489 aaPredicted RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms