RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 HDGFL2Q7Z4V5 671 aaPredicted RBP15.08■□□□□ 0
LIMK1-202ENST00000418310 ZRANB1Q9UGI0 708 aa15.08■□□□□ 0
LIMK1-202ENST00000418310 GLI2P10070 1586 aa15.08■□□□□ 0
LIMK1-202ENST00000418310 IFT172Q9UG01 1749 aa15.08■□□□□ 0
LIMK1-202ENST00000418310 NUTM2FA1L443 756 aa15.07■□□□□ 0
LIMK1-202ENST00000418310 PLEKHF1Q96S99 279 aa15.07■□□□□ 0
LIMK1-202ENST00000418310 NCKAP5LQ9HCH0 1330 aa15.07■□□□□ 0
LIMK1-202ENST00000418310 CCDC27Q2M243 656 aa15.07■□□□□ 0
LIMK1-202ENST00000418310 TBC1D32Q96NH3 1257 aa15.07■□□□□ 0
LIMK1-202ENST00000418310 ABCC3O15438 1527 aa15.07■□□□□ 0
LIMK1-202ENST00000418310 SOX12O15370 315 aa15.07■□□□□ 0
LIMK1-202ENST00000418310 YEATS2Q9ULM3 1422 aa15.07■□□□□ 0
LIMK1-202ENST00000418310 FOXD4L1Q9NU39 408 aa15.06■□□□□ 0
LIMK1-202ENST00000418310 EMILIN1Q9Y6C2 1016 aa15.06■□□□□ 0
LIMK1-202ENST00000418310 CYB5RLQ6IPT4 315 aa15.05■□□□□ 0
LIMK1-202ENST00000418310 PHACTR3Q96KR7 559 aa15.05■□□□□ -0
LIMK1-202ENST00000418310 C22orf23Q9BZE7 217 aa15.05■□□□□ -0
LIMK1-202ENST00000418310 PPLO60437 1756 aa15.05■□□□□ -0
LIMK1-202ENST00000418310 DDX19BQ9UMR2 479 aa15.05■□□□□ -0
LIMK1-202ENST00000418310 SETBP1Q9Y6X0 1596 aa15.04■□□□□ -0
LIMK1-202ENST00000418310 PLPPR3Q6T4P5 718 aa15.04■□□□□ -0
LIMK1-202ENST00000418310 TSPYL6Q8N831 410 aa15.04■□□□□ -0
LIMK1-202ENST00000418310 MYO3AQ8NEV4 1616 aa15.03■□□□□ -0
LIMK1-202ENST00000418310 DCTN1Q14203 1278 aa15.03■□□□□ -0
LIMK1-202ENST00000418310 LMTK2Q8IWU2 1503 aa15.03■□□□□ -0
LIMK1-202ENST00000418310 RRS1Q15050 365 aaKnown RBP15.03■□□□□ -0
LIMK1-202ENST00000418310 CAMSAP1Q5T5Y3 1602 aa15.03■□□□□ -0
LIMK1-202ENST00000418310 ABCC11Q96J66 1382 aa15.02■□□□□ -0
LIMK1-202ENST00000418310 SIGLEC1Q9BZZ2 1709 aa15.02□□□□□ -0.01
LIMK1-202ENST00000418310 FAM83GA6ND36 823 aa15.02□□□□□ -0.01
LIMK1-202ENST00000418310 ANKRD45Q5TZF3 282 aa15.02□□□□□ -0.01
LIMK1-202ENST00000418310 NME9Q86XW9 330 aa15.02□□□□□ -0.01
LIMK1-202ENST00000418310 HECW2Q9P2P5 1572 aa15.02□□□□□ -0.01
LIMK1-202ENST00000418310 MLH3Q9UHC1 1453 aa15.01□□□□□ -0.01
LIMK1-202ENST00000418310 APBB1O00213 710 aa15.01□□□□□ -0.01
LIMK1-202ENST00000418310 SLC52A1Q9NWF4 448 aa15.01□□□□□ -0.01
LIMK1-202ENST00000418310 NLRP1Q9C000 1473 aa15.01□□□□□ -0.01
LIMK1-202ENST00000418310 NSD2O96028 1365 aa15□□□□□ -0.01
LIMK1-202ENST00000418310 POLKQ9UBT6 870 aa15□□□□□ -0.01
LIMK1-202ENST00000418310 NEXMIFQ5QGS0 1516 aa15□□□□□ -0.01
LIMK1-202ENST00000418310 EIF5BO60841 1220 aaKnown RBP14.99□□□□□ -0.01
LIMK1-202ENST00000418310 TXNDC2Q86VQ3 553 aa14.99□□□□□ -0.01
LIMK1-202ENST00000418310 NEURL4Q96JN8 1562 aa14.99□□□□□ -0.01
LIMK1-202ENST00000418310 ATAD2Q6PL18 1390 aa14.99□□□□□ -0.01
LIMK1-202ENST00000418310 YTHDC2Q9H6S0 1430 aaKnown RBP14.98□□□□□ -0.01
LIMK1-202ENST00000418310 IPO8O15397 1037 aaKnown RBP14.98□□□□□ -0.01
LIMK1-202ENST00000418310 ZC3H13Q5T200 1668 aaKnown RBP14.98□□□□□ -0.01
LIMK1-202ENST00000418310 ANTXR1Q9H6X2 564 aa14.98□□□□□ -0.01
LIMK1-202ENST00000418310 ZBTB40Q9NUA8 1239 aa14.98□□□□□ -0.01
LIMK1-202ENST00000418310 ARHGEF28Q8N1W1 1705 aaKnown RBP14.98□□□□□ -0.01
LIMK1-202ENST00000418310 KIF16BQ96L93 1317 aa14.97□□□□□ -0.01
LIMK1-202ENST00000418310 HSCBQ8IWL3 235 aa14.96□□□□□ -0.01
LIMK1-202ENST00000418310 KRT24Q2M2I5 525 aa14.96□□□□□ -0.01
LIMK1-202ENST00000418310 RSPH6AQ9H0K4 717 aa14.96□□□□□ -0.01
LIMK1-202ENST00000418310 HSP90AA1P07900 732 aaKnown RBP14.96□□□□□ -0.02
LIMK1-202ENST00000418310 FAM69CQ0P6D2 419 aa14.96□□□□□ -0.02
LIMK1-202ENST00000418310 AAMPQ13685 434 aa14.96□□□□□ -0.02
LIMK1-202ENST00000418310 HDAC1Q13547 482 aaPredicted RBP14.95□□□□□ -0.02
LIMK1-202ENST00000418310 CHD1LQ86WJ1 897 aa14.94□□□□□ -0.02
LIMK1-202ENST00000418310 FCHSD2O94868 740 aa14.94□□□□□ -0.02
LIMK1-202ENST00000418310 SMC5Q8IY18 1101 aa14.94□□□□□ -0.02
LIMK1-202ENST00000418310 RBM42Q9BTD8 480 aaKnown RBP14.94□□□□□ -0.02
LIMK1-202ENST00000418310 MBIPQ9NS73 344 aa14.94□□□□□ -0.02
LIMK1-202ENST00000418310 PIK3C2BO00750 1634 aa14.94□□□□□ -0.02
LIMK1-202ENST00000418310 C8orf58Q8NAV2 365 aa14.93□□□□□ -0.02
LIMK1-202ENST00000418310 MYO5BQ9ULV0 1848 aa14.93□□□□□ -0.02
LIMK1-202ENST00000418310 PTPRMP28827 1452 aa14.93□□□□□ -0.02
LIMK1-202ENST00000418310 CD163L1Q9NR16 1453 aa14.93□□□□□ -0.02
LIMK1-202ENST00000418310 CT47B1P0C2W7 299 aaPredicted RBP14.93□□□□□ -0.02
LIMK1-202ENST00000418310 HSP90AB1P08238 724 aaKnown RBP14.93□□□□□ -0.02
LIMK1-202ENST00000418310 NFE2L2Q16236 605 aa14.93□□□□□ -0.02
LIMK1-202ENST00000418310 PUS7Q96PZ0 661 aaKnown RBP14.93□□□□□ -0.02
LIMK1-202ENST00000418310 TWISTNBQ3B726 338 aaPredicted RBP14.92□□□□□ -0.02
LIMK1-202ENST00000418310 PNNQ9H307 717 aaKnown RBP14.92□□□□□ -0.02
LIMK1-202ENST00000418310 VAMP4O75379 141 aa14.92□□□□□ -0.02
LIMK1-202ENST00000418310 MCM4P33991 863 aa14.92□□□□□ -0.02
LIMK1-202ENST00000418310 AEBP1Q8IUX7 1158 aa14.92□□□□□ -0.02
LIMK1-202ENST00000418310 PANK2Q9BZ23 570 aa14.92□□□□□ -0.02
LIMK1-202ENST00000418310 DIP2CQ9Y2E4 1556 aa14.91□□□□□ -0.02
LIMK1-202ENST00000418310 COL3A1P02461 1466 aaPredicted RBP14.91□□□□□ -0.02
LIMK1-202ENST00000418310 NUCB1Q02818 461 aa14.91□□□□□ -0.02
LIMK1-202ENST00000418310 CHMP5Q9NZZ3 219 aa14.9□□□□□ -0.02
LIMK1-202ENST00000418310 ADGRB2O60241 1585 aa14.9□□□□□ -0.02
LIMK1-202ENST00000418310 MRPL50Q8N5N7 158 aaKnown RBP14.9□□□□□ -0.02
LIMK1-202ENST00000418310 COG3Q96JB2 828 aa14.9□□□□□ -0.02
LIMK1-202ENST00000418310 MIS18AQ9NYP9 233 aa14.9□□□□□ -0.02
LIMK1-202ENST00000418310 VIRMAQ69YN4 1812 aaKnown RBP14.89□□□□□ -0.03
LIMK1-202ENST00000418310 ZBTB7BO15156 539 aaPredicted RBP14.89□□□□□ -0.03
LIMK1-202ENST00000418310 IL16Q14005 1332 aa14.89□□□□□ -0.03
LIMK1-202ENST00000418310 LRRC7Q96NW7 1537 aa14.89□□□□□ -0.03
LIMK1-202ENST00000418310 CD2BP2O95400 341 aaKnown RBP14.89□□□□□ -0.03
LIMK1-202ENST00000418310 MCM10Q7L590 875 aa14.89□□□□□ -0.03
LIMK1-202ENST00000418310 TRAK2O60296 914 aa14.88□□□□□ -0.03
LIMK1-202ENST00000418310 SIRT2Q8IXJ6 389 aa14.88□□□□□ -0.03
LIMK1-202ENST00000418310 C16orf71Q8IYS4 520 aaPredicted RBP14.88□□□□□ -0.03
LIMK1-202ENST00000418310 ESF1Q9H501 851 aaKnown RBP14.88□□□□□ -0.03
LIMK1-202ENST00000418310 USP32Q8NFA0 1604 aa14.88□□□□□ -0.03
LIMK1-202ENST00000418310 SULT6B1Q6IMI4 303 aa14.88□□□□□ -0.03
LIMK1-202ENST00000418310 NUDT16Q96DE0 195 aaKnown RBP14.88□□□□□ -0.03
LIMK1-202ENST00000418310 GNAI1P63096 354 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms