RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 ITSN1Q15811 1721 aa11.16□□□□□ -0.62
MDC1-203ENST00000417033 PLEKHG3A1L390 1219 aa11.16□□□□□ -0.62
MDC1-203ENST00000417033 SOCS7O14512 581 aa11.16□□□□□ -0.62
MDC1-203ENST00000417033 XPCQ01831 940 aaPredicted RBP11.16□□□□□ -0.62
MDC1-203ENST00000417033 CARD14Q9BXL6 1004 aa11.16□□□□□ -0.62
MDC1-203ENST00000417033 PANK3Q9H999 370 aa11.16□□□□□ -0.62
MDC1-203ENST00000417033 IQSEC2Q5JU85 1478 aa11.16□□□□□ -0.62
MDC1-203ENST00000417033 CPSF1Q10570 1443 aaKnown RBP11.16□□□□□ -0.62
MDC1-203ENST00000417033 ANKRD36BQ8N2N9 1353 aa11.16□□□□□ -0.62
MDC1-203ENST00000417033 UBAP1LF5GYI3 381 aa11.15□□□□□ -0.62
MDC1-203ENST00000417033 NSD3Q9BZ95 1437 aa11.15□□□□□ -0.62
MDC1-203ENST00000417033 POLR3AO14802 1390 aaPredicted RBP11.15□□□□□ -0.63
MDC1-203ENST00000417033 NINLQ9Y2I6 1382 aa11.15□□□□□ -0.63
MDC1-203ENST00000417033 FOXO3O43524 673 aa11.14□□□□□ -0.63
MDC1-203ENST00000417033 PIP4K2BP78356 416 aa11.14□□□□□ -0.63
MDC1-203ENST00000417033 AKAP12Q02952 1782 aa11.13□□□□□ -0.63
MDC1-203ENST00000417033 USP6P35125 1406 aa11.13□□□□□ -0.63
MDC1-203ENST00000417033 NGDNQ8NEJ9 315 aaKnown RBP11.13□□□□□ -0.63
MDC1-203ENST00000417033 KIF1AQ12756 1690 aa11.13□□□□□ -0.63
MDC1-203ENST00000417033 ROBO1Q9Y6N7 1651 aa11.13□□□□□ -0.63
MDC1-203ENST00000417033 KTN1Q86UP2 1357 aaKnown RBP11.13□□□□□ -0.63
MDC1-203ENST00000417033 MON2Q7Z3U7 1717 aa11.12□□□□□ -0.63
MDC1-203ENST00000417033 NRKQ7Z2Y5 1582 aa11.12□□□□□ -0.63
MDC1-203ENST00000417033 SSH2Q76I76 1423 aa11.12□□□□□ -0.63
MDC1-203ENST00000417033 CNGB1Q14028 1251 aaPredicted RBP11.12□□□□□ -0.63
MDC1-203ENST00000417033 PXDNQ92626 1479 aa11.12□□□□□ -0.63
MDC1-203ENST00000417033 PER1O15534 1290 aaPredicted RBP11.11□□□□□ -0.63
MDC1-203ENST00000417033 TOM1O60784 492 aa11.11□□□□□ -0.63
MDC1-203ENST00000417033 HDGFL2Q7Z4V5 671 aaPredicted RBP11.11□□□□□ -0.63
MDC1-203ENST00000417033 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.11□□□□□ -0.63
MDC1-203ENST00000417033 TERF2IPQ9NYB0 399 aa11.11□□□□□ -0.63
MDC1-203ENST00000417033 ZRANB1Q9UGI0 708 aa11.11□□□□□ -0.63
MDC1-203ENST00000417033 NME9Q86XW9 330 aa11.1□□□□□ -0.63
MDC1-203ENST00000417033 TTC21BQ7Z4L5 1316 aa11.09□□□□□ -0.63
MDC1-203ENST00000417033 EDC4Q6P2E9 1401 aaKnown RBP11.09□□□□□ -0.63
MDC1-203ENST00000417033 NHSL1Q5SYE7 1610 aa11.09□□□□□ -0.63
MDC1-203ENST00000417033 TRPM3Q9HCF6 1732 aaPredicted RBP11.09□□□□□ -0.63
MDC1-203ENST00000417033 AMER1Q5JTC6 1135 aaPredicted RBP11.09□□□□□ -0.63
MDC1-203ENST00000417033 KRT28Q7Z3Y7 464 aa11.09□□□□□ -0.63
MDC1-203ENST00000417033 NPHP3Q7Z494 1330 aa11.09□□□□□ -0.63
MDC1-203ENST00000417033 PSME1Q06323 249 aa11.08□□□□□ -0.64
MDC1-203ENST00000417033 NUTM2GQ5VZR2 741 aa11.08□□□□□ -0.64
MDC1-203ENST00000417033 AHDC1Q5TGY3 1603 aaPredicted RBP11.08□□□□□ -0.64
MDC1-203ENST00000417033 SOS2Q07890 1332 aaPredicted RBP11.08□□□□□ -0.64
MDC1-203ENST00000417033 PAK3O75914 559 aaPredicted RBP11.07□□□□□ -0.64
MDC1-203ENST00000417033 PLEKHG5O94827 1062 aa11.07□□□□□ -0.64
MDC1-203ENST00000417033 CC2D1BQ5T0F9 858 aaKnown RBP11.07□□□□□ -0.64
MDC1-203ENST00000417033 ZNF692Q9BU19 519 aaPredicted RBP11.07□□□□□ -0.64
MDC1-203ENST00000417033 GGNBP2Q9H3C7 697 aa11.07□□□□□ -0.64
MDC1-203ENST00000417033 KNSTRNQ9Y448 316 aa11.07□□□□□ -0.64
MDC1-203ENST00000417033 PIK3C2AO00443 1686 aa11.07□□□□□ -0.64
MDC1-203ENST00000417033 SPDYE4A6NLX3 237 aa11.06□□□□□ -0.64
MDC1-203ENST00000417033 FYB1O15117 783 aa11.06□□□□□ -0.64
MDC1-203ENST00000417033 TNS3Q68CZ2 1445 aa11.06□□□□□ -0.64
MDC1-203ENST00000417033 COL16A1Q07092 1604 aaPredicted RBP11.06□□□□□ -0.64
MDC1-203ENST00000417033 ALS2Q96Q42 1657 aa11.05□□□□□ -0.64
MDC1-203ENST00000417033 OVOS2A0A0J9YW53 1432 aa11.05□□□□□ -0.64
MDC1-203ENST00000417033 DIEXFQ68CQ4 756 aaKnown RBP11.05□□□□□ -0.64
MDC1-203ENST00000417033 OVOS2Q6IE36 1432 aa11.05□□□□□ -0.64
MDC1-203ENST00000417033 MARF1Q9Y4F3 1742 aaKnown RBP11.05□□□□□ -0.64
MDC1-203ENST00000417033 CGNL1Q0VF96 1302 aa11.05□□□□□ -0.64
MDC1-203ENST00000417033 SPATA31A3Q5VYP0 1347 aa11.05□□□□□ -0.64
MDC1-203ENST00000417033 KIF20BQ96Q89 1820 aa11.05□□□□□ -0.64
MDC1-203ENST00000417033 SBNO1A3KN83 1393 aa11.04□□□□□ -0.64
MDC1-203ENST00000417033 PHLPP1O60346 1717 aa11.04□□□□□ -0.64
MDC1-203ENST00000417033 FBLN1P23142 703 aa11.04□□□□□ -0.64
MDC1-203ENST00000417033 LMOD2Q6P5Q4 547 aa11.04□□□□□ -0.64
MDC1-203ENST00000417033 TTC21AQ8NDW8 1320 aa11.04□□□□□ -0.64
MDC1-203ENST00000417033 MED1Q15648 1581 aaPredicted RBP11.03□□□□□ -0.64
MDC1-203ENST00000417033 SOX12O15370 315 aa11.02□□□□□ -0.65
MDC1-203ENST00000417033 HSPA1LP34931 641 aa11.02□□□□□ -0.65
MDC1-203ENST00000417033 TNNT2P45379 298 aaPredicted RBP11.02□□□□□ -0.65
MDC1-203ENST00000417033 ABTB2Q8N961 1025 aa11.02□□□□□ -0.65
MDC1-203ENST00000417033 CABLES1Q8TDN4 633 aa11.02□□□□□ -0.65
MDC1-203ENST00000417033 BRD4O60885 1362 aaPredicted RBP11.02□□□□□ -0.65
MDC1-203ENST00000417033 USP31Q70CQ4 1352 aa11.02□□□□□ -0.65
MDC1-203ENST00000417033 PNPLA6Q8IY17 1366 aa11.02□□□□□ -0.65
MDC1-203ENST00000417033 NPC1L1Q9UHC9 1359 aa11.02□□□□□ -0.65
MDC1-203ENST00000417033 NLRP6P59044 892 aa11.01□□□□□ -0.65
MDC1-203ENST00000417033 USP19O94966 1318 aa11.01□□□□□ -0.65
MDC1-203ENST00000417033 PARD3Q8TEW0 1356 aa11.01□□□□□ -0.65
MDC1-203ENST00000417033 ANKRD26Q9UPS8 1709 aa11.01□□□□□ -0.65
MDC1-203ENST00000417033 MORC1Q86VD1 984 aa11□□□□□ -0.65
MDC1-203ENST00000417033 PRKRIP1Q9H875 184 aaPredicted RBP11□□□□□ -0.65
MDC1-203ENST00000417033 USP54Q70EL1 1684 aa11□□□□□ -0.65
MDC1-203ENST00000417033 CRYBG1Q9Y4K1 1723 aa11□□□□□ -0.65
MDC1-203ENST00000417033 NSD2O96028 1365 aa11□□□□□ -0.65
MDC1-203ENST00000417033 SLIT3O75094 1523 aa10.99□□□□□ -0.65
MDC1-203ENST00000417033 COG3Q96JB2 828 aa10.99□□□□□ -0.65
MDC1-203ENST00000417033 ARHGEF10O15013 1369 aa10.99□□□□□ -0.65
MDC1-203ENST00000417033 PHRF1Q9P1Y6 1649 aaKnown RBP10.98□□□□□ -0.65
MDC1-203ENST00000417033 ABCA3Q99758 1704 aa10.98□□□□□ -0.65
MDC1-203ENST00000417033 MIER1Q8N108 512 aa10.98□□□□□ -0.65
MDC1-203ENST00000417033 NFAT5O94916 1531 aa10.98□□□□□ -0.65
MDC1-203ENST00000417033 ANP32CO43423 234 aa10.97□□□□□ -0.65
MDC1-203ENST00000417033 RRS1Q15050 365 aaKnown RBP10.97□□□□□ -0.65
MDC1-203ENST00000417033 CCDC184Q52MB2 194 aa10.97□□□□□ -0.65
MDC1-203ENST00000417033 NLRP13Q86W25 1043 aa10.97□□□□□ -0.65
MDC1-203ENST00000417033 LRRC59Q96AG4 307 aaKnown RBP10.97□□□□□ -0.65
MDC1-203ENST00000417033 COL22A1Q8NFW1 1626 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms