RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 PPIP5K1Q6PFW1 1433 aa12.34□□□□□ -0.43
HCG18-234ENST00000413358 XPCQ01831 940 aaPredicted RBP12.33□□□□□ -0.44
HCG18-234ENST00000413358 DDX10Q13206 875 aaKnown RBP12.33□□□□□ -0.44
HCG18-234ENST00000413358 NUDT16Q96DE0 195 aaKnown RBP12.33□□□□□ -0.44
HCG18-234ENST00000413358 USP32Q8NFA0 1604 aa12.33□□□□□ -0.44
HCG18-234ENST00000413358 PSME1Q06323 249 aa12.32□□□□□ -0.44
HCG18-234ENST00000413358 PRR36Q9H6K5 1346 aa12.32□□□□□ -0.44
HCG18-234ENST00000413358 GJD4Q96KN9 370 aaPredicted RBP12.31□□□□□ -0.44
HCG18-234ENST00000413358 CCDC61Q9Y6R9 512 aa12.31□□□□□ -0.44
HCG18-234ENST00000413358 ANKRD36BQ8N2N9 1353 aa12.3□□□□□ -0.44
HCG18-234ENST00000413358 ATRNO75882 1429 aa12.3□□□□□ -0.44
HCG18-234ENST00000413358 SF3B2Q13435 895 aaKnown RBP12.3□□□□□ -0.44
HCG18-234ENST00000413358 KIF1AQ12756 1690 aa12.29□□□□□ -0.44
HCG18-234ENST00000413358 KRT28Q7Z3Y7 464 aa12.29□□□□□ -0.44
HCG18-234ENST00000413358 HDGFL2Q7Z4V5 671 aaPredicted RBP12.29□□□□□ -0.44
HCG18-234ENST00000413358 UNC5CLQ8IV45 518 aa12.29□□□□□ -0.44
HCG18-234ENST00000413358 SLC12A5Q9H2X9 1139 aa12.29□□□□□ -0.44
HCG18-234ENST00000413358 TERF2IPQ9NYB0 399 aa12.29□□□□□ -0.44
HCG18-234ENST00000413358 CABP1Q9NZU7 370 aa12.29□□□□□ -0.44
HCG18-234ENST00000413358 A0A1W2PP64 1363 aa12.29□□□□□ -0.44
HCG18-234ENST00000413358 COL22A1Q8NFW1 1626 aaPredicted RBP12.28□□□□□ -0.44
HCG18-234ENST00000413358 RGPD8O14715 1765 aaPredicted RBP12.28□□□□□ -0.44
HCG18-234ENST00000413358 NSD3Q9BZ95 1437 aa12.28□□□□□ -0.44
HCG18-234ENST00000413358 LMOD2Q6P5Q4 547 aa12.27□□□□□ -0.45
HCG18-234ENST00000413358 PANK3Q9H999 370 aa12.27□□□□□ -0.45
HCG18-234ENST00000413358 CCDC9Q9Y3X0 531 aaKnown RBP12.27□□□□□ -0.45
HCG18-234ENST00000413358 PXDNQ92626 1479 aa12.27□□□□□ -0.45
HCG18-234ENST00000413358 DIEXFQ68CQ4 756 aaKnown RBP12.26□□□□□ -0.45
HCG18-234ENST00000413358 NGDNQ8NEJ9 315 aaKnown RBP12.26□□□□□ -0.45
HCG18-234ENST00000413358 PMFBP1Q8TBY8 1022 aa12.26□□□□□ -0.45
HCG18-234ENST00000413358 PHF8Q9UPP1 1060 aa12.26□□□□□ -0.45
HCG18-234ENST00000413358 SPATA31A3Q5VYP0 1347 aa12.26□□□□□ -0.45
HCG18-234ENST00000413358 KTN1Q86UP2 1357 aaKnown RBP12.26□□□□□ -0.45
HCG18-234ENST00000413358 BCL9LQ86UU0 1499 aa12.26□□□□□ -0.45
HCG18-234ENST00000413358 CD163L1Q9NR16 1453 aa12.26□□□□□ -0.45
HCG18-234ENST00000413358 MON2Q7Z3U7 1717 aa12.25□□□□□ -0.45
HCG18-234ENST00000413358 AKAP12Q02952 1782 aa12.25□□□□□ -0.45
HCG18-234ENST00000413358 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
HCG18-234ENST00000413358 KNSTRNQ9Y448 316 aa12.25□□□□□ -0.45
HCG18-234ENST00000413358 ACEP12821 1306 aa12.25□□□□□ -0.45
HCG18-234ENST00000413358 A0A0G2JS52 829 aa12.24□□□□□ -0.45
HCG18-234ENST00000413358 PLEKHG3A1L390 1219 aa12.24□□□□□ -0.45
HCG18-234ENST00000413358 POLR3AO14802 1390 aaPredicted RBP12.24□□□□□ -0.45
HCG18-234ENST00000413358 USP6P35125 1406 aa12.24□□□□□ -0.45
HCG18-234ENST00000413358 MYT1Q01538 1121 aa12.24□□□□□ -0.45
HCG18-234ENST00000413358 CPSF1Q10570 1443 aaKnown RBP12.24□□□□□ -0.45
HCG18-234ENST00000413358 EDC4Q6P2E9 1401 aaKnown RBP12.24□□□□□ -0.45
HCG18-234ENST00000413358 NRKQ7Z2Y5 1582 aa12.24□□□□□ -0.45
HCG18-234ENST00000413358 CGNL1Q0VF96 1302 aa12.22□□□□□ -0.45
HCG18-234ENST00000413358 ZNF692Q9BU19 519 aaPredicted RBP12.22□□□□□ -0.45
HCG18-234ENST00000413358 BLMP54132 1417 aaPredicted RBP12.21□□□□□ -0.45
HCG18-234ENST00000413358 TNS3Q68CZ2 1445 aa12.21□□□□□ -0.45
HCG18-234ENST00000413358 ARHGEF10O15013 1369 aa12.21□□□□□ -0.45
HCG18-234ENST00000413358 KIF20BQ96Q89 1820 aa12.21□□□□□ -0.45
HCG18-234ENST00000413358 MARF1Q9Y4F3 1742 aaKnown RBP12.21□□□□□ -0.45
HCG18-234ENST00000413358 CNGB1Q14028 1251 aaPredicted RBP12.21□□□□□ -0.45
HCG18-234ENST00000413358 VPS72Q15906 364 aa12.21□□□□□ -0.45
HCG18-234ENST00000413358 SEPT12Q8IYM1 358 aa12.21□□□□□ -0.45
HCG18-234ENST00000413358 NSD2O96028 1365 aa12.2□□□□□ -0.46
HCG18-234ENST00000413358 ANP32CO43423 234 aa12.2□□□□□ -0.46
HCG18-234ENST00000413358 CABLES1Q8TDN4 633 aa12.2□□□□□ -0.46
HCG18-234ENST00000413358 CARD14Q9BXL6 1004 aa12.2□□□□□ -0.46
HCG18-234ENST00000413358 SLIT2O94813 1529 aa12.2□□□□□ -0.46
HCG18-234ENST00000413358 SBNO1A3KN83 1393 aa12.19□□□□□ -0.46
HCG18-234ENST00000413358 BRD4O60885 1362 aaPredicted RBP12.19□□□□□ -0.46
HCG18-234ENST00000413358 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
HCG18-234ENST00000413358 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■■■□ 21.3
HCG18-234ENST00000413358 TTC21AQ8NDW8 1320 aa12.18□□□□□ -0.46
HCG18-234ENST00000413358 PER1O15534 1290 aaPredicted RBP12.18□□□□□ -0.46
HCG18-234ENST00000413358 PAK3O75914 559 aaPredicted RBP12.18□□□□□ -0.46
HCG18-234ENST00000413358 CC2D1BQ5T0F9 858 aaKnown RBP12.18□□□□□ -0.46
HCG18-234ENST00000413358 NPC1L1Q9UHC9 1359 aa12.18□□□□□ -0.46
HCG18-234ENST00000413358 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.17□□□□□ -0.46
HCG18-234ENST00000413358 TTC21BQ7Z4L5 1316 aa12.17□□□□□ -0.46
HCG18-234ENST00000413358 BAG6P46379 1132 aa12.17□□□□□ -0.46
HCG18-234ENST00000413358 AMER1Q5JTC6 1135 aaPredicted RBP12.17□□□□□ -0.46
HCG18-234ENST00000413358 ANKRD26Q9UPS8 1709 aa12.17□□□□□ -0.46
HCG18-234ENST00000413358 DEFB132Q7Z7B7 95 aa12.16□□□□□ -0.46
HCG18-234ENST00000413358 SSH2Q76I76 1423 aa12.16□□□□□ -0.46
HCG18-234ENST00000413358 TRPM3Q9HCF6 1732 aaPredicted RBP12.16□□□□□ -0.46
HCG18-234ENST00000413358 PIK3C2AO00443 1686 aa12.16□□□□□ -0.46
HCG18-234ENST00000413358 FAM83GA6ND36 823 aa12.15□□□□□ -0.46
HCG18-234ENST00000413358 ONECUT3O60422 494 aaPredicted RBP12.15□□□□□ -0.46
HCG18-234ENST00000413358 NME9Q86XW9 330 aa12.15□□□□□ -0.46
HCG18-234ENST00000413358 GGNBP2Q9H3C7 697 aa12.15□□□□□ -0.46
HCG18-234ENST00000413358 GLI3P10071 1580 aa12.14□□□□□ -0.47
HCG18-234ENST00000413358 MORC1Q86VD1 984 aa12.14□□□□□ -0.47
HCG18-234ENST00000413358 COG3Q96JB2 828 aa12.14□□□□□ -0.47
HCG18-234ENST00000413358 BTG4Q9NY30 223 aa12.14□□□□□ -0.47
HCG18-234ENST00000413358 PARD3Q8TEW0 1356 aa12.14□□□□□ -0.47
HCG18-234ENST00000413358 OVOS2A0A0J9YW53 1432 aa12.13□□□□□ -0.47
HCG18-234ENST00000413358 OVOS2Q6IE36 1432 aa12.13□□□□□ -0.47
HCG18-234ENST00000413358 RALBP1Q15311 655 aa12.13□□□□□ -0.47
HCG18-234ENST00000413358 FAM98CQ17RN3 349 aaKnown RBP12.13□□□□□ -0.47
HCG18-234ENST00000413358 ABTB2Q8N961 1025 aa12.13□□□□□ -0.47
HCG18-234ENST00000413358 PRKRIP1Q9H875 184 aaPredicted RBP12.13□□□□□ -0.47
HCG18-234ENST00000413358 ALS2Q96Q42 1657 aa12.13□□□□□ -0.47
HCG18-234ENST00000413358 FYB1O15117 783 aa12.12□□□□□ -0.47
HCG18-234ENST00000413358 USP54Q70EL1 1684 aa12.12□□□□□ -0.47
HCG18-234ENST00000413358 NWD2Q9ULI1 1742 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms