RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 COL16A1Q07092 1604 aaPredicted RBP20.6■□□□□ 0.89
PUDP-202ENST00000412827 RALBP1Q15311 655 aa20.6■□□□□ 0.89
PUDP-202ENST00000412827 KRT28Q7Z3Y7 464 aa20.6■□□□□ 0.89
PUDP-202ENST00000412827 PANK3Q9H999 370 aa20.6■□□□□ 0.89
PUDP-202ENST00000412827 NPC1L1Q9UHC9 1359 aa20.6■□□□□ 0.89
PUDP-202ENST00000412827 TNS3Q68CZ2 1445 aa20.6■□□□□ 0.89
PUDP-202ENST00000412827 EDC4Q6P2E9 1401 aaKnown RBP20.6■□□□□ 0.89
PUDP-202ENST00000412827 LRRC59Q96AG4 307 aaKnown RBP20.59■□□□□ 0.89
PUDP-202ENST00000412827 ARHGEF10O15013 1369 aa20.58■□□□□ 0.89
PUDP-202ENST00000412827 TTC21AQ8NDW8 1320 aa20.58■□□□□ 0.88
PUDP-202ENST00000412827 NRKQ7Z2Y5 1582 aa20.58■□□□□ 0.88
PUDP-202ENST00000412827 XPCQ01831 940 aaPredicted RBP20.57■□□□□ 0.88
PUDP-202ENST00000412827 TRPM3Q9HCF6 1732 aaPredicted RBP20.56■□□□□ 0.88
PUDP-202ENST00000412827 PAK3O75914 559 aaPredicted RBP20.56■□□□□ 0.88
PUDP-202ENST00000412827 DDX17Q92841 729 aaKnown RBP20.56■□□□□ 0.88
PUDP-202ENST00000412827 KNSTRNQ9Y448 316 aa20.55■□□□□ 0.88
PUDP-202ENST00000412827 NSD3Q9BZ95 1437 aa20.54■□□□□ 0.88
PUDP-202ENST00000412827 SPATA31A3Q5VYP0 1347 aa20.54■□□□□ 0.88
PUDP-202ENST00000412827 HSPA1LP34931 641 aa20.54■□□□□ 0.88
PUDP-202ENST00000412827 SSH2Q76I76 1423 aa20.53■□□□□ 0.88
PUDP-202ENST00000412827 JCADQ9P266 1359 aa20.53■□□□□ 0.88
PUDP-202ENST00000412827 PARD3Q8TEW0 1356 aa20.52■□□□□ 0.88
PUDP-202ENST00000412827 TTC21BQ7Z4L5 1316 aa20.52■□□□□ 0.88
PUDP-202ENST00000412827 CGNL1Q0VF96 1302 aa20.51■□□□□ 0.87
PUDP-202ENST00000412827 ALS2Q96Q42 1657 aa20.51■□□□□ 0.87
PUDP-202ENST00000412827 LMOD2Q6P5Q4 547 aa20.51■□□□□ 0.87
PUDP-202ENST00000412827 SHPRHQ149N8 1683 aa20.5■□□□□ 0.87
PUDP-202ENST00000412827 MED1Q15648 1581 aaPredicted RBP20.5■□□□□ 0.87
PUDP-202ENST00000412827 MYBBP1AQ9BQG0 1328 aaKnown RBP20.5■□□□□ 0.87
PUDP-202ENST00000412827 ABTB2Q8N961 1025 aa20.49■□□□□ 0.87
PUDP-202ENST00000412827 NSD2O96028 1365 aa20.49■□□□□ 0.87
PUDP-202ENST00000412827 PNPLA6Q8IY17 1366 aa20.49■□□□□ 0.87
PUDP-202ENST00000412827 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.48■□□□□ 0.87
PUDP-202ENST00000412827 COL22A1Q8NFW1 1626 aaPredicted RBP20.48■□□□□ 0.87
PUDP-202ENST00000412827 AMER1Q5JTC6 1135 aaPredicted RBP20.47■□□□□ 0.87
PUDP-202ENST00000412827 NLRP13Q86W25 1043 aa20.47■□□□□ 0.87
PUDP-202ENST00000412827 PIK3C2AO00443 1686 aa20.47■□□□□ 0.87
PUDP-202ENST00000412827 CENPBP07199 599 aaPredicted RBP20.46■□□□□ 0.87
PUDP-202ENST00000412827 KIF20BQ96Q89 1820 aa20.46■□□□□ 0.87
PUDP-202ENST00000412827 USP31Q70CQ4 1352 aa20.46■□□□□ 0.87
PUDP-202ENST00000412827 SPATA31A6Q5VVP1 1343 aa20.45■□□□□ 0.86
PUDP-202ENST00000412827 USP54Q70EL1 1684 aa20.45■□□□□ 0.86
PUDP-202ENST00000412827 HAP1P54257 671 aaPredicted RBP20.45■□□□□ 0.86
PUDP-202ENST00000412827 NLRP6P59044 892 aa20.45■□□□□ 0.86
PUDP-202ENST00000412827 CARD14Q9BXL6 1004 aa20.45■□□□□ 0.86
PUDP-202ENST00000412827 COG3Q96JB2 828 aa20.44■□□□□ 0.86
PUDP-202ENST00000412827 NME9Q86XW9 330 aa20.43■□□□□ 0.86
PUDP-202ENST00000412827 OVOS2A0A0J9YW53 1432 aa20.43■□□□□ 0.86
PUDP-202ENST00000412827 OVOS2Q6IE36 1432 aa20.43■□□□□ 0.86
PUDP-202ENST00000412827 MRS2Q9HD23 443 aa20.42■□□□□ 0.86
PUDP-202ENST00000412827 USP19O94966 1318 aa20.42■□□□□ 0.86
PUDP-202ENST00000412827 SLIT3O75094 1523 aa20.4■□□□□ 0.86
PUDP-202ENST00000412827 KCNH5Q8NCM2 988 aa20.4■□□□□ 0.86
PUDP-202ENST00000412827 PHRF1Q9P1Y6 1649 aaKnown RBP20.39■□□□□ 0.86
PUDP-202ENST00000412827 FYB1O15117 783 aa20.39■□□□□ 0.85
PUDP-202ENST00000412827 NUTM2GQ5VZR2 741 aa20.39■□□□□ 0.85
PUDP-202ENST00000412827 ABCA3Q99758 1704 aa20.39■□□□□ 0.85
PUDP-202ENST00000412827 ANKRD26Q9UPS8 1709 aa20.39■□□□□ 0.85
PUDP-202ENST00000412827 CC2D1BQ5T0F9 858 aaKnown RBP20.38■□□□□ 0.85
PUDP-202ENST00000412827 ILDR1Q86SU0 546 aaPredicted RBP20.37■□□□□ 0.85
PUDP-202ENST00000412827 GGNBP2Q9H3C7 697 aa20.37■□□□□ 0.85
PUDP-202ENST00000412827 CRYBG1Q9Y4K1 1723 aa20.37■□□□□ 0.85
PUDP-202ENST00000412827 INSRP06213 1382 aa20.34■□□□□ 0.85
PUDP-202ENST00000412827 PLEKHG5O94827 1062 aa20.34■□□□□ 0.85
PUDP-202ENST00000412827 MORC1Q86VD1 984 aa20.34■□□□□ 0.85
PUDP-202ENST00000412827 YTHDC1Q96MU7 727 aaKnown RBP20.34■□□□□ 0.85
PUDP-202ENST00000412827 MARF1Q9Y4F3 1742 aaKnown RBP20.34■□□□□ 0.85
PUDP-202ENST00000412827 CPDO75976 1380 aa20.33■□□□□ 0.84
PUDP-202ENST00000412827 NUTM2BA6NNL0 878 aaPredicted RBP20.33■□□□□ 0.84
PUDP-202ENST00000412827 NUTM2EB1AL46 878 aaPredicted RBP20.33■□□□□ 0.84
PUDP-202ENST00000412827 GCP02774 474 aa20.33■□□□□ 0.84
PUDP-202ENST00000412827 NUTM2AQ8IVF1 878 aaPredicted RBP20.33■□□□□ 0.84
PUDP-202ENST00000412827 CABLES1Q8TDN4 633 aa20.33■□□□□ 0.84
PUDP-202ENST00000412827 NFAT5O94916 1531 aa20.32■□□□□ 0.84
PUDP-202ENST00000412827 CCDC184Q52MB2 194 aa20.32■□□□□ 0.84
PUDP-202ENST00000412827 MEX3CQ5U5Q3 659 aaKnown RBP20.32■□□□□ 0.84
PUDP-202ENST00000412827 ABCC6O95255 1503 aa20.31■□□□□ 0.84
PUDP-202ENST00000412827 PPP2R1AP30153 589 aa20.31■□□□□ 0.84
PUDP-202ENST00000412827 PNISRQ8TF01 805 aaKnown RBP20.31■□□□□ 0.84
PUDP-202ENST00000412827 ZRANB1Q9UGI0 708 aa20.31■□□□□ 0.84
PUDP-202ENST00000412827 AATKQ6ZMQ8 1374 aa20.3■□□□□ 0.84
PUDP-202ENST00000412827 PRDM11Q9NQV5 511 aa20.3■□□□□ 0.84
PUDP-202ENST00000412827 LRP6O75581 1613 aa20.29■□□□□ 0.84
PUDP-202ENST00000412827 SOX12O15370 315 aa20.29■□□□□ 0.84
PUDP-202ENST00000412827 RTL1A6NKG5 1358 aa20.27■□□□□ 0.84
PUDP-202ENST00000412827 KIF24Q5T7B8 1368 aa20.27■□□□□ 0.84
PUDP-202ENST00000412827 KIAA0232Q92628 1395 aa20.27■□□□□ 0.84
PUDP-202ENST00000412827 ADAMTS2O95450 1211 aa20.27■□□□□ 0.84
PUDP-202ENST00000412827 CNGB1Q14028 1251 aaPredicted RBP20.27■□□□□ 0.84
PUDP-202ENST00000412827 COL14A1Q05707 1796 aaKnown RBP20.27■□□□□ 0.84
PUDP-202ENST00000412827 ZC3H6P61129 1189 aaKnown RBP20.25■□□□□ 0.83
PUDP-202ENST00000412827 ZBTB7CA1YPR0 619 aa20.23■□□□□ 0.83
PUDP-202ENST00000412827 TNNT2P45379 298 aaPredicted RBP20.23■□□□□ 0.83
PUDP-202ENST00000412827 ARHGEF25Q86VW2 580 aa20.23■□□□□ 0.83
PUDP-202ENST00000412827 FAM9BQ8IZU0 186 aa20.23■□□□□ 0.83
PUDP-202ENST00000412827 LTN1O94822 1766 aa20.23■□□□□ 0.83
PUDP-202ENST00000412827 SMG6Q86US8 1419 aaKnown RBP20.23■□□□□ 0.83
PUDP-202ENST00000412827 AMPHP49418 695 aa20.22■□□□□ 0.83
PUDP-202ENST00000412827 C8orf37Q96NL8 207 aa20.22■□□□□ 0.83
PUDP-202ENST00000412827 FLT4P35916 1363 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms