RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 KTN1Q86UP2 1357 aaKnown RBP19.13■□□□□ 0.65
MINDY4-202ENST00000409881 CPSF1Q10570 1443 aaKnown RBP19.12■□□□□ 0.65
MINDY4-202ENST00000409881 SLAIN2Q9P270 581 aa19.11■□□□□ 0.65
MINDY4-202ENST00000409881 POLR3AO14802 1390 aaPredicted RBP19.1■□□□□ 0.65
MINDY4-202ENST00000409881 ZNF692Q9BU19 519 aaPredicted RBP19.1■□□□□ 0.65
MINDY4-202ENST00000409881 NOP58Q9Y2X3 529 aaKnown RBP19.09■□□□□ 0.65
MINDY4-202ENST00000409881 AKAP12Q02952 1782 aa19.09■□□□□ 0.65
MINDY4-202ENST00000409881 CCDC184Q52MB2 194 aa19.08■□□□□ 0.65
MINDY4-202ENST00000409881 FOXO3O43524 673 aa19.08■□□□□ 0.64
MINDY4-202ENST00000409881 PAK3O75914 559 aaPredicted RBP19.08■□□□□ 0.64
MINDY4-202ENST00000409881 CC2D1BQ5T0F9 858 aaKnown RBP19.08■□□□□ 0.64
MINDY4-202ENST00000409881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.08■□□□□ 0.64
MINDY4-202ENST00000409881 USP6P35125 1406 aa19.07■□□□□ 0.64
MINDY4-202ENST00000409881 MON2Q7Z3U7 1717 aa19.07■□□□□ 0.64
MINDY4-202ENST00000409881 KIF1AQ12756 1690 aa19.07■□□□□ 0.64
MINDY4-202ENST00000409881 AMER1Q5JTC6 1135 aaPredicted RBP19.07■□□□□ 0.64
MINDY4-202ENST00000409881 CGNL1Q0VF96 1302 aa19.07■□□□□ 0.64
MINDY4-202ENST00000409881 EDC4Q6P2E9 1401 aaKnown RBP19.06■□□□□ 0.64
MINDY4-202ENST00000409881 BRINP3Q76B58 766 aa19.06■□□□□ 0.64
MINDY4-202ENST00000409881 PSME1Q06323 249 aa19.06■□□□□ 0.64
MINDY4-202ENST00000409881 XPCQ01831 940 aaPredicted RBP19.05■□□□□ 0.64
MINDY4-202ENST00000409881 CERKQ8TCT0 537 aa19.05■□□□□ 0.64
MINDY4-202ENST00000409881 DDX17Q92841 729 aaKnown RBP19.04■□□□□ 0.64
MINDY4-202ENST00000409881 TTC21BQ7Z4L5 1316 aa19.03■□□□□ 0.64
MINDY4-202ENST00000409881 NRKQ7Z2Y5 1582 aa19.02■□□□□ 0.64
MINDY4-202ENST00000409881 TOM1O60784 492 aa19.02■□□□□ 0.64
MINDY4-202ENST00000409881 FAM9BQ8IZU0 186 aa19.02■□□□□ 0.64
MINDY4-202ENST00000409881 IQSEC2Q5JU85 1478 aa19.01■□□□□ 0.63
MINDY4-202ENST00000409881 NME9Q86XW9 330 aa19.01■□□□□ 0.63
MINDY4-202ENST00000409881 GGNBP2Q9H3C7 697 aa19.01■□□□□ 0.63
MINDY4-202ENST00000409881 PRKRIP1Q9H875 184 aaPredicted RBP19.01■□□□□ 0.63
MINDY4-202ENST00000409881 UBAP1LF5GYI3 381 aa19.01■□□□□ 0.63
MINDY4-202ENST00000409881 SSH2Q76I76 1423 aa19.01■□□□□ 0.63
MINDY4-202ENST00000409881 NPC1L1Q9UHC9 1359 aa19.01■□□□□ 0.63
MINDY4-202ENST00000409881 NPHP3Q7Z494 1330 aa19.01■□□□□ 0.63
MINDY4-202ENST00000409881 FYB1O15117 783 aa19■□□□□ 0.63
MINDY4-202ENST00000409881 KRT28Q7Z3Y7 464 aa19■□□□□ 0.63
MINDY4-202ENST00000409881 PIP4K2BP78356 416 aa18.99■□□□□ 0.63
MINDY4-202ENST00000409881 KIF20BQ96Q89 1820 aa18.99■□□□□ 0.63
MINDY4-202ENST00000409881 NSD2O96028 1365 aa18.99■□□□□ 0.63
MINDY4-202ENST00000409881 ZRANB1Q9UGI0 708 aa18.98■□□□□ 0.63
MINDY4-202ENST00000409881 TTC21AQ8NDW8 1320 aa18.98■□□□□ 0.63
MINDY4-202ENST00000409881 ROBO1Q9Y6N7 1651 aa18.98■□□□□ 0.63
MINDY4-202ENST00000409881 MORC1Q86VD1 984 aa18.98■□□□□ 0.63
MINDY4-202ENST00000409881 BRD4O60885 1362 aaPredicted RBP18.97■□□□□ 0.63
MINDY4-202ENST00000409881 PARD3Q8TEW0 1356 aa18.97■□□□□ 0.63
MINDY4-202ENST00000409881 RALBP1Q15311 655 aa18.97■□□□□ 0.63
MINDY4-202ENST00000409881 ANO8Q9HCE9 1232 aaPredicted RBP18.97■□□□□ 0.63
MINDY4-202ENST00000409881 TNNT2P45379 298 aaPredicted RBP18.96■□□□□ 0.63
MINDY4-202ENST00000409881 NUTM2GQ5VZR2 741 aa18.96■□□□□ 0.63
MINDY4-202ENST00000409881 LMOD2Q6P5Q4 547 aa18.96■□□□□ 0.63
MINDY4-202ENST00000409881 ABTB2Q8N961 1025 aa18.96■□□□□ 0.63
MINDY4-202ENST00000409881 PXDNQ92626 1479 aa18.95■□□□□ 0.62
MINDY4-202ENST00000409881 COG3Q96JB2 828 aa18.95■□□□□ 0.62
MINDY4-202ENST00000409881 PIK3C2AO00443 1686 aa18.94■□□□□ 0.62
MINDY4-202ENST00000409881 TRPM3Q9HCF6 1732 aaPredicted RBP18.94■□□□□ 0.62
MINDY4-202ENST00000409881 MRS2Q9HD23 443 aa18.94■□□□□ 0.62
MINDY4-202ENST00000409881 ZBED9Q6R2W3 1325 aa18.93■□□□□ 0.62
MINDY4-202ENST00000409881 NHSL1Q5SYE7 1610 aa18.93■□□□□ 0.62
MINDY4-202ENST00000409881 NLRP6P59044 892 aa18.93■□□□□ 0.62
MINDY4-202ENST00000409881 ANKRD26Q9UPS8 1709 aa18.92■□□□□ 0.62
MINDY4-202ENST00000409881 SBNO1A3KN83 1393 aa18.92■□□□□ 0.62
MINDY4-202ENST00000409881 SOS2Q07890 1332 aaPredicted RBP18.92■□□□□ 0.62
MINDY4-202ENST00000409881 MYBBP1AQ9BQG0 1328 aaKnown RBP18.91■□□□□ 0.62
MINDY4-202ENST00000409881 PLEKHG5O94827 1062 aa18.91■□□□□ 0.62
MINDY4-202ENST00000409881 OVOS2A0A0J9YW53 1432 aa18.91■□□□□ 0.62
MINDY4-202ENST00000409881 OVOS2Q6IE36 1432 aa18.91■□□□□ 0.62
MINDY4-202ENST00000409881 TNS3Q68CZ2 1445 aa18.9■□□□□ 0.62
MINDY4-202ENST00000409881 USP31Q70CQ4 1352 aa18.9■□□□□ 0.62
MINDY4-202ENST00000409881 SOX12O15370 315 aa18.89■□□□□ 0.61
MINDY4-202ENST00000409881 PPP2R1AP30153 589 aa18.89■□□□□ 0.61
MINDY4-202ENST00000409881 SPATA31A3Q5VYP0 1347 aa18.89■□□□□ 0.61
MINDY4-202ENST00000409881 AHDC1Q5TGY3 1603 aaPredicted RBP18.88■□□□□ 0.61
MINDY4-202ENST00000409881 RTL5Q5HYW3 569 aaPredicted RBP18.88■□□□□ 0.61
MINDY4-202ENST00000409881 ANP32AP39687 249 aaKnown RBP18.88■□□□□ 0.61
MINDY4-202ENST00000409881 NLRP13Q86W25 1043 aa18.88■□□□□ 0.61
MINDY4-202ENST00000409881 IPO9Q96P70 1041 aaKnown RBP18.88■□□□□ 0.61
MINDY4-202ENST00000409881 ALS2Q96Q42 1657 aa18.87■□□□□ 0.61
MINDY4-202ENST00000409881 FBLN1P23142 703 aa18.87■□□□□ 0.61
MINDY4-202ENST00000409881 ARHGEF10O15013 1369 aa18.85■□□□□ 0.61
MINDY4-202ENST00000409881 SALL2Q9Y467 1007 aaPredicted RBP18.85■□□□□ 0.61
MINDY4-202ENST00000409881 MARF1Q9Y4F3 1742 aaKnown RBP18.85■□□□□ 0.61
MINDY4-202ENST00000409881 ZBTB47Q9UFB7 747 aaPredicted RBP18.84■□□□□ 0.61
MINDY4-202ENST00000409881 PHLPP1O60346 1717 aa18.84■□□□□ 0.61
MINDY4-202ENST00000409881 USP54Q70EL1 1684 aa18.84■□□□□ 0.61
MINDY4-202ENST00000409881 RRS1Q15050 365 aaKnown RBP18.82■□□□□ 0.6
MINDY4-202ENST00000409881 LRRC59Q96AG4 307 aaKnown RBP18.82■□□□□ 0.6
MINDY4-202ENST00000409881 CCDC136Q96JN2 1154 aa18.82■□□□□ 0.6
MINDY4-202ENST00000409881 USP19O94966 1318 aa18.82■□□□□ 0.6
MINDY4-202ENST00000409881 PPM1GO15355 546 aaPredicted RBP18.81■□□□□ 0.6
MINDY4-202ENST00000409881 MTHFSP49914 203 aa18.81■□□□□ 0.6
MINDY4-202ENST00000409881 IL27Q8NEV9 243 aa18.81■□□□□ 0.6
MINDY4-202ENST00000409881 CABLES1Q8TDN4 633 aa18.81■□□□□ 0.6
MINDY4-202ENST00000409881 AATKQ6ZMQ8 1374 aa18.81■□□□□ 0.6
MINDY4-202ENST00000409881 COL16A1Q07092 1604 aaPredicted RBP18.81■□□□□ 0.6
MINDY4-202ENST00000409881 EMILIN1Q9Y6C2 1016 aa18.8■□□□□ 0.6
MINDY4-202ENST00000409881 MED1Q15648 1581 aaPredicted RBP18.8■□□□□ 0.6
MINDY4-202ENST00000409881 POLKQ9UBT6 870 aa18.8■□□□□ 0.6
MINDY4-202ENST00000409881 KCNH5Q8NCM2 988 aa18.79■□□□□ 0.6
MINDY4-202ENST00000409881 SLIT3O75094 1523 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms