RNA–Protein interactions for RNA: ENST00000409529.6

CCDC138-202, Transcript of coiled-coil domain containing 138, humanhuman

TSL 2

Gene CCDC138, Length 2,364 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-202ENST00000409529 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.31
CCDC138-202ENST00000409529 TMPOP42166 694 aaKnown RBP16.96■□□□□ 0.31
CCDC138-202ENST00000409529 COL3A1P02461 1466 aaPredicted RBP16.96■□□□□ 0.3
CCDC138-202ENST00000409529 ZMYM3Q14202 1370 aa16.96■□□□□ 0.3
CCDC138-202ENST00000409529 TRIM35Q9UPQ4 493 aa16.95■□□□□ 0.3
CCDC138-202ENST00000409529 DIAPH1O60610 1272 aaKnown RBP16.94■□□□□ 0.3
CCDC138-202ENST00000409529 MYH16Q9H6N6 1097 aa16.94■□□□□ 0.3
CCDC138-202ENST00000409529 MAPK8IP3Q9UPT6 1336 aa16.94■□□□□ 0.3
CCDC138-202ENST00000409529 ZRANB1Q9UGI0 708 aa16.93■□□□□ 0.3
CCDC138-202ENST00000409529 ADGRB2O60241 1585 aa16.93■□□□□ 0.3
CCDC138-202ENST00000409529 C8orf34Q49A92 452 aa16.92■□□□□ 0.3
CCDC138-202ENST00000409529 SETD1AO15047 1707 aaKnown RBP16.92■□□□□ 0.3
CCDC138-202ENST00000409529 RIPK4P57078 832 aa16.92■□□□□ 0.3
CCDC138-202ENST00000409529 EXOSC9Q06265 439 aaKnown RBP16.92■□□□□ 0.3
CCDC138-202ENST00000409529 ANKRD26Q9UPS8 1709 aa16.91■□□□□ 0.3
CCDC138-202ENST00000409529 KIF13AQ9H1H9 1805 aa16.91■□□□□ 0.3
CCDC138-202ENST00000409529 POLKQ9UBT6 870 aa16.91■□□□□ 0.3
CCDC138-202ENST00000409529 MED14O60244 1454 aa16.91■□□□□ 0.3
CCDC138-202ENST00000409529 WASLO00401 505 aaPredicted RBP16.91■□□□□ 0.3
CCDC138-202ENST00000409529 FAM161AQ3B820 660 aa16.9■□□□□ 0.3
CCDC138-202ENST00000409529 NME9Q86XW9 330 aa16.9■□□□□ 0.3
CCDC138-202ENST00000409529 PCDHB15Q9Y5E8 787 aa16.9■□□□□ 0.3
CCDC138-202ENST00000409529 NRXN3Q9Y4C0 1643 aa16.89■□□□□ 0.3
CCDC138-202ENST00000409529 DLC1Q96QB1 1528 aa16.89■□□□□ 0.29
CCDC138-202ENST00000409529 HMOX1P09601 288 aa16.89■□□□□ 0.29
CCDC138-202ENST00000409529 EMILIN1Q9Y6C2 1016 aa16.89■□□□□ 0.29
CCDC138-202ENST00000409529 PNPLA6Q8IY17 1366 aa16.89■□□□□ 0.29
CCDC138-202ENST00000409529 KIF20BQ96Q89 1820 aa16.88■□□□□ 0.29
CCDC138-202ENST00000409529 PPIP5K1Q6PFW1 1433 aa16.88■□□□□ 0.29
CCDC138-202ENST00000409529 PLPPR3Q6T4P5 718 aa16.88■□□□□ 0.29
CCDC138-202ENST00000409529 PRKAR2BP31323 418 aa16.87■□□□□ 0.29
CCDC138-202ENST00000409529 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.87■□□□□ 0.29
CCDC138-202ENST00000409529 LAS1LQ9Y4W2 734 aaKnown RBP16.87■□□□□ 0.29
CCDC138-202ENST00000409529 NUDT16Q96DE0 195 aaKnown RBP16.87■□□□□ 0.29
CCDC138-202ENST00000409529 SLC4A3P48751 1232 aa16.86■□□□□ 0.29
CCDC138-202ENST00000409529 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
CCDC138-202ENST00000409529 SMC4Q9NTJ3 1288 aa16.86■□□□□ 0.29
CCDC138-202ENST00000409529 NUTM2FA1L443 756 aa16.86■□□□□ 0.29
CCDC138-202ENST00000409529 SSH1Q8WYL5 1049 aa16.86■□□□□ 0.29
CCDC138-202ENST00000409529 CEBPAP49715 358 aaPredicted RBP16.85■□□□□ 0.29
CCDC138-202ENST00000409529 PHACTR3Q96KR7 559 aa16.85■□□□□ 0.29
CCDC138-202ENST00000409529 ATP7BP35670 1465 aa16.85■□□□□ 0.29
CCDC138-202ENST00000409529 ZKSCAN2Q63HK3 967 aa16.85■□□□□ 0.29
CCDC138-202ENST00000409529 RSPH6AQ9H0K4 717 aa16.85■□□□□ 0.29
CCDC138-202ENST00000409529 TNRQ92752 1358 aa16.85■□□□□ 0.29
CCDC138-202ENST00000409529 MAP2P11137 1827 aaKnown RBP16.84■□□□□ 0.29
CCDC138-202ENST00000409529 RRS1Q15050 365 aaKnown RBP16.84■□□□□ 0.29
CCDC138-202ENST00000409529 FTSJ3Q8IY81 847 aaKnown RBP16.84■□□□□ 0.29
CCDC138-202ENST00000409529 THUMPD2Q9BTF0 503 aaKnown RBP16.84■□□□□ 0.29
CCDC138-202ENST00000409529 FCHSD2O94868 740 aa16.84■□□□□ 0.29
CCDC138-202ENST00000409529 CPSF1Q10570 1443 aaKnown RBP16.83■□□□□ 0.28
CCDC138-202ENST00000409529 DZIP1LQ8IYY4 767 aaKnown RBP16.83■□□□□ 0.28
CCDC138-202ENST00000409529 MVPQ14764 893 aaKnown RBP16.82■□□□□ 0.28
CCDC138-202ENST00000409529 LRRC7Q96NW7 1537 aa16.82■□□□□ 0.28
CCDC138-202ENST00000409529 TRIM27P14373 513 aa16.82■□□□□ 0.28
CCDC138-202ENST00000409529 CCDC61Q9Y6R9 512 aa16.82■□□□□ 0.28
CCDC138-202ENST00000409529 PRR36Q9H6K5 1346 aa16.81■□□□□ 0.28
CCDC138-202ENST00000409529 LTKP29376 864 aa16.81■□□□□ 0.28
CCDC138-202ENST00000409529 NOB1Q9ULX3 412 aaKnown RBP16.81■□□□□ 0.28
CCDC138-202ENST00000409529 TMEM2Q9UHN6 1383 aa16.81■□□□□ 0.28
CCDC138-202ENST00000409529 CPS1P31327 1500 aa16.81■□□□□ 0.28
CCDC138-202ENST00000409529 HDGFP51858 240 aaKnown RBP16.81■□□□□ 0.28
CCDC138-202ENST00000409529 EDC4Q6P2E9 1401 aaKnown RBP16.81■□□□□ 0.28
CCDC138-202ENST00000409529 ROBO2Q9HCK4 1378 aa16.81■□□□□ 0.28
CCDC138-202ENST00000409529 PMFBP1Q8TBY8 1022 aa16.8■□□□□ 0.28
CCDC138-202ENST00000409529 PNNQ9H307 717 aaKnown RBP16.8■□□□□ 0.28
CCDC138-202ENST00000409529 SEC24BO95487 1268 aa16.79■□□□□ 0.28
CCDC138-202ENST00000409529 IL13P35225 146 aa16.79■□□□□ 0.28
CCDC138-202ENST00000409529 COG3Q96JB2 828 aa16.79■□□□□ 0.28
CCDC138-202ENST00000409529 SLC26A8Q96RN1 970 aa16.79■□□□□ 0.28
CCDC138-202ENST00000409529 IL16Q14005 1332 aa16.79■□□□□ 0.28
CCDC138-202ENST00000409529 FAM135BQ49AJ0 1406 aa16.79■□□□□ 0.28
CCDC138-202ENST00000409529 ITPRIPQ8IWB1 547 aa16.79■□□□□ 0.28
CCDC138-202ENST00000409529 PDZRN3Q9UPQ7 1066 aa16.79■□□□□ 0.28
CCDC138-202ENST00000409529 NEFMP07197 916 aa16.78■□□□□ 0.28
CCDC138-202ENST00000409529 CT47B1P0C2W7 299 aaPredicted RBP16.78■□□□□ 0.28
CCDC138-202ENST00000409529 DDRGK1Q96HY6 314 aa16.78■□□□□ 0.28
CCDC138-202ENST00000409529 ATF7IPQ6VMQ6 1270 aa16.78■□□□□ 0.28
CCDC138-202ENST00000409529 ADAMTS13Q76LX8 1427 aa16.76■□□□□ 0.27
CCDC138-202ENST00000409529 UBR1Q8IWV7 1749 aa16.76■□□□□ 0.27
CCDC138-202ENST00000409529 ELL2O00472 640 aaPredicted RBP16.76■□□□□ 0.27
CCDC138-202ENST00000409529 DEKP35659 375 aaKnown RBP16.76■□□□□ 0.27
CCDC138-202ENST00000409529 NFE2L2Q16236 605 aa16.76■□□□□ 0.27
CCDC138-202ENST00000409529 TMEM57Q8N5G2 664 aa16.76■□□□□ 0.27
CCDC138-202ENST00000409529 RWDD1Q9H446 243 aaPredicted RBP16.76■□□□□ 0.27
CCDC138-202ENST00000409529 TECPR2O15040 1411 aa16.75■□□□□ 0.27
CCDC138-202ENST00000409529 CDC42BPGQ6DT37 1551 aa16.75■□□□□ 0.27
CCDC138-202ENST00000409529 FAM83GA6ND36 823 aa16.74■□□□□ 0.27
CCDC138-202ENST00000409529 SOX12O15370 315 aa16.74■□□□□ 0.27
CCDC138-202ENST00000409529 AAMPQ13685 434 aa16.74■□□□□ 0.27
CCDC138-202ENST00000409529 RTL5Q5HYW3 569 aaPredicted RBP16.74■□□□□ 0.27
CCDC138-202ENST00000409529 TSPYL6Q8N831 410 aa16.74■□□□□ 0.27
CCDC138-202ENST00000409529 SIRT1Q96EB6 747 aa16.74■□□□□ 0.27
CCDC138-202ENST00000409529 DCTN1Q14203 1278 aa16.73■□□□□ 0.27
CCDC138-202ENST00000409529 USP19O94966 1318 aa16.73■□□□□ 0.27
CCDC138-202ENST00000409529 KNDC1Q76NI1 1749 aa16.73■□□□□ 0.27
CCDC138-202ENST00000409529 ACEP12821 1306 aa16.72■□□□□ 0.27
CCDC138-202ENST00000409529 DAXXQ9UER7 740 aaPredicted RBP16.72■□□□□ 0.27
CCDC138-202ENST00000409529 DDX19BQ9UMR2 479 aa16.72■□□□□ 0.27
CCDC138-202ENST00000409529 AATKQ6ZMQ8 1374 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms