RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ZNF428Q96B54 188 aa21.11■□□□□ 0.97
SMPD4-202ENST00000409031 C1orf115Q9H7X2 142 aa21.11■□□□□ 0.97
SMPD4-202ENST00000409031 CNTROBQ8N137 903 aa21.11■□□□□ 0.97
SMPD4-202ENST00000409031 SMC2O95347 1197 aa21.11■□□□□ 0.97
SMPD4-202ENST00000409031 PDIA4P13667 645 aaKnown RBP21.1■□□□□ 0.97
SMPD4-202ENST00000409031 BAG4O95429 457 aaKnown RBP21.1■□□□□ 0.97
SMPD4-202ENST00000409031 LRRFIP1Q32MZ4 808 aaKnown RBP21.1■□□□□ 0.97
SMPD4-202ENST00000409031 TRIM29Q14134 588 aa21.1■□□□□ 0.97
SMPD4-202ENST00000409031 GNAI3P08754 354 aa21.1■□□□□ 0.97
SMPD4-202ENST00000409031 RARSP54136 660 aaKnown RBP21.1■□□□□ 0.97
SMPD4-202ENST00000409031 ERBINQ96RT1 1412 aa21.09■□□□□ 0.97
SMPD4-202ENST00000409031 AMPHP49418 695 aa21.09■□□□□ 0.97
SMPD4-202ENST00000409031 OLFM4Q6UX06 510 aa21.09■□□□□ 0.97
SMPD4-202ENST00000409031 FGD5Q6ZNL6 1462 aa21.09■□□□□ 0.97
SMPD4-202ENST00000409031 DEF6Q9H4E7 631 aa21.09■□□□□ 0.97
SMPD4-202ENST00000409031 EIF3JO75822 258 aaKnown RBP21.08■□□□□ 0.96
SMPD4-202ENST00000409031 CDR1P51861 262 aa21.08■□□□□ 0.96
SMPD4-202ENST00000409031 NUP62CLQ9H1M0 184 aa21.08■□□□□ 0.96
SMPD4-202ENST00000409031 ANKRD30BQ9BXX2 1392 aa21.08■□□□□ 0.96
SMPD4-202ENST00000409031 CCDC183Q5T5S1 534 aa21.07■□□□□ 0.96
SMPD4-202ENST00000409031 UBXN4Q92575 508 aa21.07■□□□□ 0.96
SMPD4-202ENST00000409031 GTPBP4Q9BZE4 634 aaKnown RBP21.07■□□□□ 0.96
SMPD4-202ENST00000409031 C9orf78Q9NZ63 289 aaPredicted RBP21.07■□□□□ 0.96
SMPD4-202ENST00000409031 EFCAB5A4FU69 1503 aa21.07■□□□□ 0.96
SMPD4-202ENST00000409031 USP8P40818 1118 aa21.07■□□□□ 0.96
SMPD4-202ENST00000409031 JPH4Q96JJ6 628 aa21.07■□□□□ 0.96
SMPD4-202ENST00000409031 ZKSCAN5Q9Y2L8 839 aa21.07■□□□□ 0.96
SMPD4-202ENST00000409031 DHX29Q7Z478 1369 aaKnown RBP21.07■□□□□ 0.96
SMPD4-202ENST00000409031 PDILTQ8N807 584 aa21.06■□□□□ 0.96
SMPD4-202ENST00000409031 EHBP1L1Q8N3D4 1523 aa21.06■□□□□ 0.96
SMPD4-202ENST00000409031 ERLIN1O75477 346 aa21.06■□□□□ 0.96
SMPD4-202ENST00000409031 NUTM2DQ5VT03 806 aaPredicted RBP21.06■□□□□ 0.96
SMPD4-202ENST00000409031 UVSSAQ2YD98 709 aa21.06■□□□□ 0.96
SMPD4-202ENST00000409031 PTPN14Q15678 1187 aa21.05■□□□□ 0.96
SMPD4-202ENST00000409031 TWISTNBQ3B726 338 aaPredicted RBP21.05■□□□□ 0.96
SMPD4-202ENST00000409031 TMCO3Q6UWJ1 677 aa21.05■□□□□ 0.96
SMPD4-202ENST00000409031 IGHDP01880 384 aa21.05■□□□□ 0.96
SMPD4-202ENST00000409031 SMAP1Q8IYB5 467 aaPredicted RBP21.05■□□□□ 0.96
SMPD4-202ENST00000409031 USP25Q9UHP3 1055 aa21.04■□□□□ 0.96
SMPD4-202ENST00000409031 G3BP1Q13283 466 aaKnown RBP eCLIP21.04■□□□□ 0.964e-7■□□□□ 10.4
SMPD4-202ENST00000409031 MAP3K11Q16584 847 aa21.04■□□□□ 0.96
SMPD4-202ENST00000409031 GGNBP2Q9H3C7 697 aa21.04■□□□□ 0.96
SMPD4-202ENST00000409031 MAPKBP1O60336 1514 aa21.04■□□□□ 0.96
SMPD4-202ENST00000409031 TAF7LQ5H9L4 462 aa21.04■□□□□ 0.96
SMPD4-202ENST00000409031 KIF18AQ8NI77 898 aa21.04■□□□□ 0.96
SMPD4-202ENST00000409031 FMNL2Q96PY5 1086 aa21.03■□□□□ 0.96
SMPD4-202ENST00000409031 TMEM57Q8N5G2 664 aa21.03■□□□□ 0.96
SMPD4-202ENST00000409031 UBTFL1P0CB47 393 aaPredicted RBP21.03■□□□□ 0.96
SMPD4-202ENST00000409031 ZNF396Q96N95 335 aaPredicted RBP21.03■□□□□ 0.96
SMPD4-202ENST00000409031 TOMM22Q9NS69 142 aa21.03■□□□□ 0.96
SMPD4-202ENST00000409031 CYP46A1Q9Y6A2 500 aa21.03■□□□□ 0.96
SMPD4-202ENST00000409031 HMOX1P09601 288 aa21.02■□□□□ 0.96
SMPD4-202ENST00000409031 AKAP17AQ02040 695 aaKnown RBP21.02■□□□□ 0.96
SMPD4-202ENST00000409031 ZSCAN23Q3MJ62 389 aa21.02■□□□□ 0.96
SMPD4-202ENST00000409031 CCDC94Q9BW85 323 aaPredicted RBP21.02■□□□□ 0.96
SMPD4-202ENST00000409031 BBXQ8WY36 941 aaPredicted RBP21.02■□□□□ 0.96
SMPD4-202ENST00000409031 MAPK8IP2Q13387 824 aaPredicted RBP21.02■□□□□ 0.96
SMPD4-202ENST00000409031 FILIP1Q7Z7B0 1213 aa21.02■□□□□ 0.96
SMPD4-202ENST00000409031 LARP1BQ659C4 914 aaKnown RBP21.01■□□□□ 0.95
SMPD4-202ENST00000409031 CLASRPQ8N2M8 674 aaKnown RBP21.01■□□□□ 0.95
SMPD4-202ENST00000409031 ZSCAN31Q96LW9 406 aaPredicted RBP21.01■□□□□ 0.95
SMPD4-202ENST00000409031 LRSAM1Q6UWE0 723 aa21.01■□□□□ 0.95
SMPD4-202ENST00000409031 RPAP2Q8IXW5 612 aaPredicted RBP21.01■□□□□ 0.95
SMPD4-202ENST00000409031 MINK1Q8N4C8 1332 aaPredicted RBP21■□□□□ 0.95
SMPD4-202ENST00000409031 TNNT1P13805 278 aa21■□□□□ 0.95
SMPD4-202ENST00000409031 BMP2KLQ5H9B9 411 aa21■□□□□ 0.95
SMPD4-202ENST00000409031 TIGD1Q96MW7 591 aa21■□□□□ 0.95
SMPD4-202ENST00000409031 PDE4CQ08493 712 aa21■□□□□ 0.95
SMPD4-202ENST00000409031 ANKRD1Q15327 319 aa21■□□□□ 0.95
SMPD4-202ENST00000409031 SRCIN1Q9C0H9 1055 aa21■□□□□ 0.95
SMPD4-202ENST00000409031 TSPYL4Q9UJ04 414 aa21■□□□□ 0.95
SMPD4-202ENST00000409031 CEP57L1Q8IYX8 460 aa21■□□□□ 0.95
SMPD4-202ENST00000409031 HIP1O00291 1037 aa20.99■□□□□ 0.95
SMPD4-202ENST00000409031 TERF1P54274 439 aa20.99■□□□□ 0.95
SMPD4-202ENST00000409031 SPDYE4A6NLX3 237 aa20.99■□□□□ 0.95
SMPD4-202ENST00000409031 GNAI2P04899 355 aa20.99■□□□□ 0.95
SMPD4-202ENST00000409031 SNX21Q969T3 373 aa20.99■□□□□ 0.95
SMPD4-202ENST00000409031 SURF6O75683 361 aaKnown RBP20.99■□□□□ 0.95
SMPD4-202ENST00000409031 PLEKHH1Q9ULM0 1364 aa20.99■□□□□ 0.95
SMPD4-202ENST00000409031 PCMTD1Q96MG8 357 aaPredicted RBP20.98■□□□□ 0.95
SMPD4-202ENST00000409031 PRKAR2BP31323 418 aa20.98■□□□□ 0.95
SMPD4-202ENST00000409031 NEXNQ0ZGT2 675 aa20.98■□□□□ 0.95
SMPD4-202ENST00000409031 AXDND1Q5T1B0 1012 aaPredicted RBP20.98■□□□□ 0.95
SMPD4-202ENST00000409031 ADCY5O95622 1261 aa20.98■□□□□ 0.95
SMPD4-202ENST00000409031 TRDNQ13061 729 aa20.98■□□□□ 0.95
SMPD4-202ENST00000409031 SPATA32Q96LK8 384 aa20.98■□□□□ 0.95
SMPD4-202ENST00000409031 FOSBP53539 338 aa20.97■□□□□ 0.95
SMPD4-202ENST00000409031 NOLC1Q14978 699 aaKnown RBP eCLIP20.97■□□□□ 0.953e-9■□□□□ 10.1
SMPD4-202ENST00000409031 LRRCC1Q9C099 1032 aa20.97■□□□□ 0.95
SMPD4-202ENST00000409031 FANCD2Q9BXW9 1451 aa20.97■□□□□ 0.95
SMPD4-202ENST00000409031 NEMFO60524 1076 aa20.97■□□□□ 0.95
SMPD4-202ENST00000409031 DCTN1Q14203 1278 aa20.97■□□□□ 0.95
SMPD4-202ENST00000409031 PPP6R1Q9UPN7 881 aa20.97■□□□□ 0.95
SMPD4-202ENST00000409031 CCDC47Q96A33 483 aaKnown RBP20.96■□□□□ 0.95
SMPD4-202ENST00000409031 POLA1P09884 1462 aaPredicted RBP20.96■□□□□ 0.95
SMPD4-202ENST00000409031 CEP89Q96ST8 783 aa20.96■□□□□ 0.95
SMPD4-202ENST00000409031 SERPINC1P01008 464 aa20.96■□□□□ 0.95
SMPD4-202ENST00000409031 SAFBQ15424 915 aaKnown RBP eCLIP20.96■□□□□ 0.95
SMPD4-202ENST00000409031 KIAA0754O94854 1291 aa20.95■□□□□ 0.95
SMPD4-202ENST00000409031 EIF2S2P20042 333 aaKnown RBP20.95■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms