RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 ATRNO75882 1429 aa11.71□□□□□ -0.53
GPC3-203ENST00000406757 LRPPRCP42704 1394 aaKnown RBP11.71□□□□□ -0.53
GPC3-203ENST00000406757 PLEKHH1Q9ULM0 1364 aa11.71□□□□□ -0.53
GPC3-203ENST00000406757 C11orf95C9JLR9 678 aaPredicted RBP11.71□□□□□ -0.53
GPC3-203ENST00000406757 FXR2P51116 673 aaKnown RBP eCLIP11.71□□□□□ -0.53
GPC3-203ENST00000406757 PRAM1Q96QH2 718 aa11.71□□□□□ -0.53
GPC3-203ENST00000406757 POGKQ9P215 609 aa11.71□□□□□ -0.53
GPC3-203ENST00000406757 ZNF316A6NFI3 1004 aaPredicted RBP11.7□□□□□ -0.54
GPC3-203ENST00000406757 POLR3GLQ9BT43 218 aa11.7□□□□□ -0.54
GPC3-203ENST00000406757 BCL9LQ86UU0 1499 aa11.7□□□□□ -0.54
GPC3-203ENST00000406757 TECPR2O15040 1411 aa11.69□□□□□ -0.54
GPC3-203ENST00000406757 ABCC11Q96J66 1382 aa11.68□□□□□ -0.54
GPC3-203ENST00000406757 MINK1Q8N4C8 1332 aaPredicted RBP11.68□□□□□ -0.54
GPC3-203ENST00000406757 CENPJQ9HC77 1338 aaPredicted RBP11.68□□□□□ -0.54
GPC3-203ENST00000406757 GJD4Q96KN9 370 aaPredicted RBP11.67□□□□□ -0.54
GPC3-203ENST00000406757 TESK2Q96S53 571 aa11.67□□□□□ -0.54
GPC3-203ENST00000406757 ARHGEF28Q8N1W1 1705 aaKnown RBP11.66□□□□□ -0.54
GPC3-203ENST00000406757 KNDC1Q76NI1 1749 aa11.66□□□□□ -0.54
GPC3-203ENST00000406757 MARF1Q9Y4F3 1742 aaKnown RBP11.66□□□□□ -0.54
GPC3-203ENST00000406757 EIF3AQ14152 1382 aaKnown RBP11.66□□□□□ -0.54
GPC3-203ENST00000406757 SPATA31A3Q5VYP0 1347 aa11.65□□□□□ -0.54
GPC3-203ENST00000406757 PLEKHG5O94827 1062 aa11.65□□□□□ -0.54
GPC3-203ENST00000406757 KRT28Q7Z3Y7 464 aa11.65□□□□□ -0.54
GPC3-203ENST00000406757 FMN2Q9NZ56 1722 aa11.65□□□□□ -0.54
GPC3-203ENST00000406757 HAX1O00165 279 aa11.64□□□□□ -0.55
GPC3-203ENST00000406757 UNC5CLQ8IV45 518 aa11.64□□□□□ -0.55
GPC3-203ENST00000406757 KIF1AQ12756 1690 aa11.63□□□□□ -0.55
GPC3-203ENST00000406757 QRICH2Q9H0J4 1663 aa11.63□□□□□ -0.55
GPC3-203ENST00000406757 CABLES1Q8TDN4 633 aa11.63□□□□□ -0.55
GPC3-203ENST00000406757 SIRT1Q96EB6 747 aa11.63□□□□□ -0.55
GPC3-203ENST00000406757 CABP2Q9NPB3 220 aa11.63□□□□□ -0.55
GPC3-203ENST00000406757 ZRANB1Q9UGI0 708 aa11.63□□□□□ -0.55
GPC3-203ENST00000406757 DLC1Q96QB1 1528 aa11.63□□□□□ -0.55
GPC3-203ENST00000406757 WASHC2AQ641Q2 1341 aa11.62□□□□□ -0.55
GPC3-203ENST00000406757 SLIT2O94813 1529 aa11.62□□□□□ -0.55
GPC3-203ENST00000406757 HAP1P54257 671 aaPredicted RBP11.62□□□□□ -0.55
GPC3-203ENST00000406757 TMF1P82094 1093 aa11.62□□□□□ -0.55
GPC3-203ENST00000406757 CCDC125Q86Z20 511 aa11.62□□□□□ -0.55
GPC3-203ENST00000406757 PHF8Q9UPP1 1060 aa11.62□□□□□ -0.55
GPC3-203ENST00000406757 GLI3P10071 1580 aa11.62□□□□□ -0.55
GPC3-203ENST00000406757 KIF7Q2M1P5 1343 aa11.61□□□□□ -0.55
GPC3-203ENST00000406757 USP32Q8NFA0 1604 aa11.61□□□□□ -0.55
GPC3-203ENST00000406757 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.61□□□□□ -0.55
GPC3-203ENST00000406757 SPDYE2BA6NHP3 402 aa11.61□□□□□ -0.55
GPC3-203ENST00000406757 SPDYE6P0CI01 402 aa11.61□□□□□ -0.55
GPC3-203ENST00000406757 SPDYE2Q495Y8 402 aa11.61□□□□□ -0.55
GPC3-203ENST00000406757 LMOD2Q6P5Q4 547 aa11.61□□□□□ -0.55
GPC3-203ENST00000406757 CDK19Q9BWU1 502 aa11.61□□□□□ -0.55
GPC3-203ENST00000406757 TNS3Q68CZ2 1445 aa11.6□□□□□ -0.55
GPC3-203ENST00000406757 RGPD8O14715 1765 aaPredicted RBP11.6□□□□□ -0.55
GPC3-203ENST00000406757 SRPK2P78362 688 aaKnown RBP11.6□□□□□ -0.55
GPC3-203ENST00000406757 PSME1Q06323 249 aa11.6□□□□□ -0.55
GPC3-203ENST00000406757 DDX10Q13206 875 aaKnown RBP11.6□□□□□ -0.55
GPC3-203ENST00000406757 CCDC7Q96M83 1385 aa11.59□□□□□ -0.55
GPC3-203ENST00000406757 PMFBP1Q8TBY8 1022 aa11.59□□□□□ -0.55
GPC3-203ENST00000406757 CCDC9Q9Y3X0 531 aaKnown RBP11.59□□□□□ -0.55
GPC3-203ENST00000406757 EVC2Q86UK5 1308 aa11.59□□□□□ -0.55
GPC3-203ENST00000406757 WASLO00401 505 aaPredicted RBP11.58□□□□□ -0.56
GPC3-203ENST00000406757 VPS72Q15906 364 aa11.58□□□□□ -0.56
GPC3-203ENST00000406757 SEPT12Q8IYM1 358 aa11.58□□□□□ -0.56
GPC3-203ENST00000406757 TULP4Q9NRJ4 1543 aa11.58□□□□□ -0.56
GPC3-203ENST00000406757 BLMP54132 1417 aaPredicted RBP11.58□□□□□ -0.56
GPC3-203ENST00000406757 SBNO1A3KN83 1393 aa11.57□□□□□ -0.56
GPC3-203ENST00000406757 DEFB132Q7Z7B7 95 aa11.57□□□□□ -0.56
GPC3-203ENST00000406757 TMC1Q8TDI8 760 aa11.57□□□□□ -0.56
GPC3-203ENST00000406757 ARHGEF10O15013 1369 aa11.56□□□□□ -0.56
GPC3-203ENST00000406757 PLCH1Q4KWH8 1693 aa11.56□□□□□ -0.56
GPC3-203ENST00000406757 FAM83GA6ND36 823 aa11.56□□□□□ -0.56
GPC3-203ENST00000406757 BRWD3Q6RI45 1802 aa11.56□□□□□ -0.56
GPC3-203ENST00000406757 SBNO2Q9Y2G9 1366 aa11.55□□□□□ -0.56
GPC3-203ENST00000406757 ABCA3Q99758 1704 aa11.55□□□□□ -0.56
GPC3-203ENST00000406757 SF3B2Q13435 895 aaKnown RBP11.55□□□□□ -0.56
GPC3-203ENST00000406757 CNGB1Q14028 1251 aaPredicted RBP11.55□□□□□ -0.56
GPC3-203ENST00000406757 NUDT16Q96DE0 195 aaKnown RBP11.55□□□□□ -0.56
GPC3-203ENST00000406757 SLC12A5Q9H2X9 1139 aa11.55□□□□□ -0.56
GPC3-203ENST00000406757 PRR36Q9H6K5 1346 aa11.55□□□□□ -0.56
GPC3-203ENST00000406757 ANKARQ7Z5J8 1434 aa11.54□□□□□ -0.56
GPC3-203ENST00000406757 A0A0G2JS52 829 aa11.54□□□□□ -0.56
GPC3-203ENST00000406757 ONECUT3O60422 494 aaPredicted RBP11.54□□□□□ -0.56
GPC3-203ENST00000406757 MYT1Q01538 1121 aa11.54□□□□□ -0.56
GPC3-203ENST00000406757 CDCA8Q53HL2 280 aa11.54□□□□□ -0.56
GPC3-203ENST00000406757 KRT27Q7Z3Y8 459 aa11.54□□□□□ -0.56
GPC3-203ENST00000406757 NWD2Q9ULI1 1742 aa11.53□□□□□ -0.56
GPC3-203ENST00000406757 SLC24A1O60721 1099 aa11.53□□□□□ -0.56
GPC3-203ENST00000406757 BTG4Q9NY30 223 aa11.53□□□□□ -0.56
GPC3-203ENST00000406757 CABP1Q9NZU7 370 aa11.53□□□□□ -0.56
GPC3-203ENST00000406757 ADGRB2O60241 1585 aa11.53□□□□□ -0.56
GPC3-203ENST00000406757 FAM98CQ17RN3 349 aaKnown RBP11.52□□□□□ -0.57
GPC3-203ENST00000406757 PANK3Q9H999 370 aa11.52□□□□□ -0.57
GPC3-203ENST00000406757 TRPM3Q9HCF6 1732 aaPredicted RBP11.51□□□□□ -0.57
GPC3-203ENST00000406757 NRAPQ86VF7 1730 aa11.5□□□□□ -0.57
GPC3-203ENST00000406757 PAK3O75914 559 aaPredicted RBP11.5□□□□□ -0.57
GPC3-203ENST00000406757 EVX2Q03828 476 aa11.5□□□□□ -0.57
GPC3-203ENST00000406757 MKRN4PQ13434 485 aaPredicted RBP11.49□□□□□ -0.57
GPC3-203ENST00000406757 FAM182BQ5T319 152 aa11.49□□□□□ -0.57
GPC3-203ENST00000406757 DIEXFQ68CQ4 756 aaKnown RBP11.49□□□□□ -0.57
GPC3-203ENST00000406757 NGDNQ8NEJ9 315 aaKnown RBP11.49□□□□□ -0.57
GPC3-203ENST00000406757 PUS7Q96PZ0 661 aaKnown RBP11.49□□□□□ -0.57
GPC3-203ENST00000406757 CCDC61Q9Y6R9 512 aa11.49□□□□□ -0.57
GPC3-203ENST00000406757 PPIP5K1Q6PFW1 1433 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms