RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 CABP1Q9NZU7 370 aa13.94□□□□□ -0.18
LINC00649-202ENST00000400353 PNPLA6Q8IY17 1366 aa13.94□□□□□ -0.18
LINC00649-202ENST00000400353 CDC42BPGQ6DT37 1551 aa13.93□□□□□ -0.18
LINC00649-202ENST00000400353 EDC4Q6P2E9 1401 aaKnown RBP13.93□□□□□ -0.18
LINC00649-202ENST00000400353 KDM2BQ8NHM5 1336 aa13.93□□□□□ -0.18
LINC00649-202ENST00000400353 WASLO00401 505 aaPredicted RBP13.93□□□□□ -0.18
LINC00649-202ENST00000400353 CT47B1P0C2W7 299 aaPredicted RBP13.93□□□□□ -0.18
LINC00649-202ENST00000400353 AAMPQ13685 434 aa13.93□□□□□ -0.18
LINC00649-202ENST00000400353 SENP3Q9H4L4 574 aaPredicted RBP13.93□□□□□ -0.18
LINC00649-202ENST00000400353 MSH5O43196 834 aa13.92□□□□□ -0.18
LINC00649-202ENST00000400353 ANP32AP39687 249 aaKnown RBP13.92□□□□□ -0.18
LINC00649-202ENST00000400353 DMRT2Q9Y5R5 561 aa13.92□□□□□ -0.18
LINC00649-202ENST00000400353 FER1L4A9Z1Z3 1794 aa13.92□□□□□ -0.18
LINC00649-202ENST00000400353 METP08581 1390 aa13.92□□□□□ -0.18
LINC00649-202ENST00000400353 WAPLQ7Z5K2 1190 aa13.92□□□□□ -0.18
LINC00649-202ENST00000400353 KLHL34Q8N239 644 aa13.92□□□□□ -0.18
LINC00649-202ENST00000400353 CPSF1Q10570 1443 aaKnown RBP13.91□□□□□ -0.18
LINC00649-202ENST00000400353 MAPK8IP3Q9UPT6 1336 aa13.91□□□□□ -0.18
LINC00649-202ENST00000400353 DIAPH1O60610 1272 aaKnown RBP13.91□□□□□ -0.18
LINC00649-202ENST00000400353 NEUROD2Q15784 382 aa13.91□□□□□ -0.18
LINC00649-202ENST00000400353 PPIP5K1Q6PFW1 1433 aa13.9□□□□□ -0.18
LINC00649-202ENST00000400353 PLEKHG1Q9ULL1 1385 aa13.9□□□□□ -0.18
LINC00649-202ENST00000400353 IL16Q14005 1332 aa13.9□□□□□ -0.18
LINC00649-202ENST00000400353 BCAR3O75815 825 aa13.9□□□□□ -0.18
LINC00649-202ENST00000400353 PLEKHF1Q96S99 279 aa13.9□□□□□ -0.18
LINC00649-202ENST00000400353 RRP7AQ9Y3A4 280 aaKnown RBP13.9□□□□□ -0.18
LINC00649-202ENST00000400353 U2SURPO15042 1029 aaKnown RBP13.89□□□□□ -0.19
LINC00649-202ENST00000400353 CANXP27824 592 aaKnown RBP13.89□□□□□ -0.19
LINC00649-202ENST00000400353 RIMS1Q86UR5 1692 aaKnown RBP13.88□□□□□ -0.19
LINC00649-202ENST00000400353 PDE4AP27815 886 aa13.88□□□□□ -0.19
LINC00649-202ENST00000400353 RARSP54136 660 aaKnown RBP13.88□□□□□ -0.19
LINC00649-202ENST00000400353 MON2Q7Z3U7 1717 aa13.88□□□□□ -0.19
LINC00649-202ENST00000400353 AATKQ6ZMQ8 1374 aa13.87□□□□□ -0.19
LINC00649-202ENST00000400353 C3P01024 1663 aa13.87□□□□□ -0.19
LINC00649-202ENST00000400353 ADAMTSL3P82987 1691 aa13.87□□□□□ -0.19
LINC00649-202ENST00000400353 FCHSD2O94868 740 aa13.87□□□□□ -0.19
LINC00649-202ENST00000400353 TMPOP42166 694 aaKnown RBP13.87□□□□□ -0.19
LINC00649-202ENST00000400353 TXNDC2Q86VQ3 553 aa13.87□□□□□ -0.19
LINC00649-202ENST00000400353 NUDT16Q96DE0 195 aaKnown RBP13.87□□□□□ -0.19
LINC00649-202ENST00000400353 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
LINC00649-202ENST00000400353 BACH2Q9BYV9 841 aa13.87□□□□□ -0.19
LINC00649-202ENST00000400353 CCDC61Q9Y6R9 512 aa13.87□□□□□ -0.19
LINC00649-202ENST00000400353 ADAMTS13Q76LX8 1427 aa13.87□□□□□ -0.19
LINC00649-202ENST00000400353 AKAP12Q02952 1782 aa13.86□□□□□ -0.19
LINC00649-202ENST00000400353 ITSN1Q15811 1721 aa13.86□□□□□ -0.19
LINC00649-202ENST00000400353 NEFMP07197 916 aa13.86□□□□□ -0.19
LINC00649-202ENST00000400353 CDK12Q9NYV4 1490 aaPredicted RBP13.85□□□□□ -0.19
LINC00649-202ENST00000400353 IPO9Q96P70 1041 aaKnown RBP13.85□□□□□ -0.19
LINC00649-202ENST00000400353 SLIT1O75093 1534 aa13.84□□□□□ -0.19
LINC00649-202ENST00000400353 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.84□□□□□ -0.19
LINC00649-202ENST00000400353 POLKQ9UBT6 870 aa13.84□□□□□ -0.19
LINC00649-202ENST00000400353 NOP58Q9Y2X3 529 aaKnown RBP13.84□□□□□ -0.19
LINC00649-202ENST00000400353 EID1Q9Y6B2 187 aa13.84□□□□□ -0.19
LINC00649-202ENST00000400353 ARHGAP23Q9P227 1491 aa13.84□□□□□ -0.19
LINC00649-202ENST00000400353 DIP2AQ14689 1571 aa13.83□□□□□ -0.19
LINC00649-202ENST00000400353 CLUAP1Q96AJ1 413 aa13.83□□□□□ -0.2
LINC00649-202ENST00000400353 COG3Q96JB2 828 aa13.83□□□□□ -0.2
LINC00649-202ENST00000400353 TRIM35Q9UPQ4 493 aa13.83□□□□□ -0.2
LINC00649-202ENST00000400353 LRRC7Q96NW7 1537 aa13.82□□□□□ -0.2
LINC00649-202ENST00000400353 TOPAZ1Q8N9V7 1692 aa13.82□□□□□ -0.2
LINC00649-202ENST00000400353 KDM4FA0A1W2PPD8 638 aa13.82□□□□□ -0.2
LINC00649-202ENST00000400353 ROBO2Q9HCK4 1378 aa13.82□□□□□ -0.2
LINC00649-202ENST00000400353 RIPK4P57078 832 aa13.81□□□□□ -0.2
LINC00649-202ENST00000400353 CALD1Q05682 793 aaKnown RBP13.81□□□□□ -0.2
LINC00649-202ENST00000400353 PMFBP1Q8TBY8 1022 aa13.81□□□□□ -0.2
LINC00649-202ENST00000400353 PDIA4P13667 645 aaKnown RBP13.81□□□□□ -0.2
LINC00649-202ENST00000400353 FRAT1Q92837 279 aaPredicted RBP13.81□□□□□ -0.2
LINC00649-202ENST00000400353 RSPH6AQ9H0K4 717 aa13.81□□□□□ -0.2
LINC00649-202ENST00000400353 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
LINC00649-202ENST00000400353 PLEKHG3A1L390 1219 aa13.79□□□□□ -0.2
LINC00649-202ENST00000400353 ZKSCAN2Q63HK3 967 aa13.79□□□□□ -0.2
LINC00649-202ENST00000400353 PANK1Q8TE04 598 aa13.79□□□□□ -0.2
LINC00649-202ENST00000400353 COG6Q9Y2V7 657 aa13.79□□□□□ -0.2
LINC00649-202ENST00000400353 PTCH1Q13635 1447 aa13.79□□□□□ -0.2
LINC00649-202ENST00000400353 NRKQ7Z2Y5 1582 aa13.79□□□□□ -0.2
LINC00649-202ENST00000400353 NME9Q86XW9 330 aa13.79□□□□□ -0.2
LINC00649-202ENST00000400353 ZNF428Q96B54 188 aa13.79□□□□□ -0.2
LINC00649-202ENST00000400353 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.79□□□□□ -0.2
LINC00649-202ENST00000400353 ZBTB47Q9UFB7 747 aaPredicted RBP13.79□□□□□ -0.2
LINC00649-202ENST00000400353 TBX22Q9Y458 520 aa13.79□□□□□ -0.2
LINC00649-202ENST00000400353 LTKP29376 864 aa13.78□□□□□ -0.2
LINC00649-202ENST00000400353 IL13P35225 146 aa13.78□□□□□ -0.2
LINC00649-202ENST00000400353 FAM161AQ3B820 660 aa13.78□□□□□ -0.2
LINC00649-202ENST00000400353 PRR36Q9H6K5 1346 aa13.78□□□□□ -0.2
LINC00649-202ENST00000400353 PRKAR2BP31323 418 aa13.78□□□□□ -0.2
LINC00649-202ENST00000400353 EXOSC9Q06265 439 aaKnown RBP13.78□□□□□ -0.2
LINC00649-202ENST00000400353 NFE2L2Q16236 605 aa13.78□□□□□ -0.2
LINC00649-202ENST00000400353 LMOD3Q0VAK6 560 aa13.77□□□□□ -0.21
LINC00649-202ENST00000400353 THEMISQ8N1K5 641 aaPredicted RBP13.77□□□□□ -0.21
LINC00649-202ENST00000400353 DDRGK1Q96HY6 314 aa13.77□□□□□ -0.21
LINC00649-202ENST00000400353 PPM1GO15355 546 aaPredicted RBP13.76□□□□□ -0.21
LINC00649-202ENST00000400353 MVPQ14764 893 aaKnown RBP13.76□□□□□ -0.21
LINC00649-202ENST00000400353 ALDH1L2Q3SY69 923 aa13.76□□□□□ -0.21
LINC00649-202ENST00000400353 DZIP1LQ8IYY4 767 aaKnown RBP13.76□□□□□ -0.21
LINC00649-202ENST00000400353 SMC4Q9NTJ3 1288 aa13.76□□□□□ -0.21
LINC00649-202ENST00000400353 PTPRUQ92729 1446 aa13.76□□□□□ -0.21
LINC00649-202ENST00000400353 TTC21BQ7Z4L5 1316 aa13.75□□□□□ -0.21
LINC00649-202ENST00000400353 TSR2Q969E8 191 aaKnown RBP13.75□□□□□ -0.21
LINC00649-202ENST00000400353 EMILIN1Q9Y6C2 1016 aa13.75□□□□□ -0.21
LINC00649-202ENST00000400353 KIF16BQ96L93 1317 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms