RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 DIAPH1O60610 1272 aaKnown RBP22.98■■□□□ 1.27
HLA-DQB1-204ENST00000399084 PLEKHF1Q96S99 279 aa22.96■■□□□ 1.27
HLA-DQB1-204ENST00000399084 AATKQ6ZMQ8 1374 aa22.96■■□□□ 1.27
HLA-DQB1-204ENST00000399084 FCHSD2O94868 740 aa22.96■■□□□ 1.27
HLA-DQB1-204ENST00000399084 C20orf194Q5TEA3 1177 aa22.96■■□□□ 1.27
HLA-DQB1-204ENST00000399084 ANP32EQ9BTT0 268 aa22.96■■□□□ 1.27
HLA-DQB1-204ENST00000399084 KDM2BQ8NHM5 1336 aa22.95■■□□□ 1.26
HLA-DQB1-204ENST00000399084 MAPK8IP3Q9UPT6 1336 aa22.95■■□□□ 1.26
HLA-DQB1-204ENST00000399084 PPIP5K1Q6PFW1 1433 aa22.95■■□□□ 1.26
HLA-DQB1-204ENST00000399084 DMRT2Q9Y5R5 561 aa22.94■■□□□ 1.26
HLA-DQB1-204ENST00000399084 EID1Q9Y6B2 187 aa22.94■■□□□ 1.26
HLA-DQB1-204ENST00000399084 NUDT16Q96DE0 195 aaKnown RBP22.94■■□□□ 1.26
HLA-DQB1-204ENST00000399084 ADAMTS13Q76LX8 1427 aa22.93■■□□□ 1.26
HLA-DQB1-204ENST00000399084 TXNDC2Q86VQ3 553 aa22.93■■□□□ 1.26
HLA-DQB1-204ENST00000399084 SENP3Q9H4L4 574 aaPredicted RBP22.92■■□□□ 1.26
HLA-DQB1-204ENST00000399084 SLIT1O75093 1534 aa22.92■■□□□ 1.26
HLA-DQB1-204ENST00000399084 TMPOP42166 694 aaKnown RBP22.91■■□□□ 1.26
HLA-DQB1-204ENST00000399084 NEUROD2Q15784 382 aa22.91■■□□□ 1.26
HLA-DQB1-204ENST00000399084 U2SURPO15042 1029 aaKnown RBP22.91■■□□□ 1.26
HLA-DQB1-204ENST00000399084 BCAR3O75815 825 aa22.91■■□□□ 1.26
HLA-DQB1-204ENST00000399084 NEFMP07197 916 aa22.91■■□□□ 1.26
HLA-DQB1-204ENST00000399084 RARSP54136 660 aaKnown RBP22.91■■□□□ 1.26
HLA-DQB1-204ENST00000399084 ARHGAP23Q9P227 1491 aa22.9■■□□□ 1.26
HLA-DQB1-204ENST00000399084 POLKQ9UBT6 870 aa22.89■■□□□ 1.26
HLA-DQB1-204ENST00000399084 RRP7AQ9Y3A4 280 aaKnown RBP22.89■■□□□ 1.26
HLA-DQB1-204ENST00000399084 TBX22Q9Y458 520 aa22.89■■□□□ 1.26
HLA-DQB1-204ENST00000399084 MON2Q7Z3U7 1717 aa22.89■■□□□ 1.25
HLA-DQB1-204ENST00000399084 ANP32AP39687 249 aaKnown RBP22.88■■□□□ 1.25
HLA-DQB1-204ENST00000399084 THEMISQ8N1K5 641 aaPredicted RBP22.87■■□□□ 1.25
HLA-DQB1-204ENST00000399084 KDM4FA0A1W2PPD8 638 aa22.86■■□□□ 1.25
HLA-DQB1-204ENST00000399084 CANXP27824 592 aaKnown RBP22.86■■□□□ 1.25
HLA-DQB1-204ENST00000399084 CDK12Q9NYV4 1490 aaPredicted RBP22.86■■□□□ 1.25
HLA-DQB1-204ENST00000399084 DIP2AQ14689 1571 aa22.86■■□□□ 1.25
HLA-DQB1-204ENST00000399084 AKAP12Q02952 1782 aa22.86■■□□□ 1.25
HLA-DQB1-204ENST00000399084 PLEKHG3A1L390 1219 aa22.85■■□□□ 1.25
HLA-DQB1-204ENST00000399084 COG3Q96JB2 828 aa22.85■■□□□ 1.25
HLA-DQB1-204ENST00000399084 CALD1Q05682 793 aaKnown RBP22.85■■□□□ 1.25
HLA-DQB1-204ENST00000399084 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.85■■□□□ 1.25
HLA-DQB1-204ENST00000399084 BACH2Q9BYV9 841 aa22.85■■□□□ 1.25
HLA-DQB1-204ENST00000399084 ROBO2Q9HCK4 1378 aa22.84■■□□□ 1.25
HLA-DQB1-204ENST00000399084 PDE4AP27815 886 aa22.84■■□□□ 1.25
HLA-DQB1-204ENST00000399084 ZNF428Q96B54 188 aa22.84■■□□□ 1.25
HLA-DQB1-204ENST00000399084 C3P01024 1663 aa22.84■■□□□ 1.25
HLA-DQB1-204ENST00000399084 LTKP29376 864 aa22.83■■□□□ 1.25
HLA-DQB1-204ENST00000399084 TRIM35Q9UPQ4 493 aa22.83■■□□□ 1.25
HLA-DQB1-204ENST00000399084 ITSN1Q15811 1721 aa22.83■■□□□ 1.25
HLA-DQB1-204ENST00000399084 MSH5O43196 834 aa22.82■■□□□ 1.24
HLA-DQB1-204ENST00000399084 RIPK4P57078 832 aa22.81■■□□□ 1.24
HLA-DQB1-204ENST00000399084 ERICH6Q7L0X2 663 aa22.81■■□□□ 1.24
HLA-DQB1-204ENST00000399084 PTCH1Q13635 1447 aa22.81■■□□□ 1.24
HLA-DQB1-204ENST00000399084 MAP2P11137 1827 aaKnown RBP22.81■■□□□ 1.24
HLA-DQB1-204ENST00000399084 CLUAP1Q96AJ1 413 aa22.8■■□□□ 1.24
HLA-DQB1-204ENST00000399084 ILDR1Q86SU0 546 aaPredicted RBP22.79■■□□□ 1.24
HLA-DQB1-204ENST00000399084 RSPH6AQ9H0K4 717 aa22.79■■□□□ 1.24
HLA-DQB1-204ENST00000399084 FER1L4A9Z1Z3 1794 aa22.79■■□□□ 1.24
HLA-DQB1-204ENST00000399084 PIK3R4Q99570 1358 aa22.78■■□□□ 1.24
HLA-DQB1-204ENST00000399084 PMFBP1Q8TBY8 1022 aa22.78■■□□□ 1.24
HLA-DQB1-204ENST00000399084 IPO9Q96P70 1041 aaKnown RBP22.78■■□□□ 1.24
HLA-DQB1-204ENST00000399084 IL13P35225 146 aa22.77■■□□□ 1.24
HLA-DQB1-204ENST00000399084 TOPAZ1Q8N9V7 1692 aa22.77■■□□□ 1.24
HLA-DQB1-204ENST00000399084 PRR36Q9H6K5 1346 aa22.77■■□□□ 1.24
HLA-DQB1-204ENST00000399084 LMOD3Q0VAK6 560 aa22.77■■□□□ 1.23
HLA-DQB1-204ENST00000399084 ZKSCAN2Q63HK3 967 aa22.77■■□□□ 1.23
HLA-DQB1-204ENST00000399084 NME9Q86XW9 330 aa22.77■■□□□ 1.23
HLA-DQB1-204ENST00000399084 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.75■■□□□ 1.23
HLA-DQB1-204ENST00000399084 NFE2L2Q16236 605 aa22.75■■□□□ 1.23
HLA-DQB1-204ENST00000399084 LRRC7Q96NW7 1537 aa22.75■■□□□ 1.23
HLA-DQB1-204ENST00000399084 FRAT1Q92837 279 aaPredicted RBP22.74■■□□□ 1.23
HLA-DQB1-204ENST00000399084 TTC21AQ8NDW8 1320 aa22.74■■□□□ 1.23
HLA-DQB1-204ENST00000399084 PRKAR2BP31323 418 aa22.74■■□□□ 1.23
HLA-DQB1-204ENST00000399084 CEBPAP49715 358 aaPredicted RBP22.74■■□□□ 1.23
HLA-DQB1-204ENST00000399084 ALDH1L2Q3SY69 923 aa22.74■■□□□ 1.23
HLA-DQB1-204ENST00000399084 TTC21BQ7Z4L5 1316 aa22.73■■□□□ 1.23
HLA-DQB1-204ENST00000399084 BRPF1P55201 1214 aaPredicted RBP22.73■■□□□ 1.23
HLA-DQB1-204ENST00000399084 AMOTL2Q9Y2J4 779 aa22.73■■□□□ 1.23
HLA-DQB1-204ENST00000399084 PTPRUQ92729 1446 aa22.72■■□□□ 1.23
HLA-DQB1-204ENST00000399084 PPM1GO15355 546 aaPredicted RBP22.72■■□□□ 1.23
HLA-DQB1-204ENST00000399084 IPO8O15397 1037 aaKnown RBP22.72■■□□□ 1.23
HLA-DQB1-204ENST00000399084 COG6Q9Y2V7 657 aa22.72■■□□□ 1.23
HLA-DQB1-204ENST00000399084 PANK1Q8TE04 598 aa22.71■■□□□ 1.23
HLA-DQB1-204ENST00000399084 NRKQ7Z2Y5 1582 aa22.71■■□□□ 1.23
HLA-DQB1-204ENST00000399084 USP6P35125 1406 aa22.71■■□□□ 1.23
HLA-DQB1-204ENST00000399084 ACEP12821 1306 aa22.71■■□□□ 1.23
HLA-DQB1-204ENST00000399084 EXOSC9Q06265 439 aaKnown RBP22.71■■□□□ 1.23
HLA-DQB1-204ENST00000399084 NOP58Q9Y2X3 529 aaKnown RBP22.71■■□□□ 1.23
HLA-DQB1-204ENST00000399084 KIF16BQ96L93 1317 aa22.7■■□□□ 1.22
HLA-DQB1-204ENST00000399084 EMILIN1Q9Y6C2 1016 aa22.7■■□□□ 1.22
HLA-DQB1-204ENST00000399084 USP31Q70CQ4 1352 aa22.69■■□□□ 1.22
HLA-DQB1-204ENST00000399084 GNAI1P63096 354 aa22.69■■□□□ 1.22
HLA-DQB1-204ENST00000399084 FAM161AQ3B820 660 aa22.69■■□□□ 1.22
HLA-DQB1-204ENST00000399084 DZIP1LQ8IYY4 767 aaKnown RBP22.69■■□□□ 1.22
HLA-DQB1-204ENST00000399084 MVPQ14764 893 aaKnown RBP22.68■■□□□ 1.22
HLA-DQB1-204ENST00000399084 SLC26A8Q96RN1 970 aa22.68■■□□□ 1.22
HLA-DQB1-204ENST00000399084 OVOS2A0A0J9YW53 1432 aa22.68■■□□□ 1.22
HLA-DQB1-204ENST00000399084 OVOS2Q6IE36 1432 aa22.68■■□□□ 1.22
HLA-DQB1-204ENST00000399084 SSH2Q76I76 1423 aa22.68■■□□□ 1.22
HLA-DQB1-204ENST00000399084 ANKARQ7Z5J8 1434 aa22.68■■□□□ 1.22
HLA-DQB1-204ENST00000399084 RWDD1Q9H446 243 aaPredicted RBP22.68■■□□□ 1.22
HLA-DQB1-204ENST00000399084 SMC4Q9NTJ3 1288 aa22.68■■□□□ 1.22
HLA-DQB1-204ENST00000399084 IFT57Q9NWB7 429 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms