RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 ZBTB47Q9UFB7 747 aaPredicted RBP17.89■□□□□ 0.45
PRAME-202ENST00000398743 METP08581 1390 aa17.89■□□□□ 0.45
PRAME-202ENST00000398743 DIAPH1O60610 1272 aaKnown RBP17.89■□□□□ 0.45
PRAME-202ENST00000398743 PAK3O75914 559 aaPredicted RBP17.89■□□□□ 0.45
PRAME-202ENST00000398743 TNRQ92752 1358 aa17.88■□□□□ 0.45
PRAME-202ENST00000398743 WASLO00401 505 aaPredicted RBP17.87■□□□□ 0.45
PRAME-202ENST00000398743 TMPOP42166 694 aaKnown RBP17.87■□□□□ 0.45
PRAME-202ENST00000398743 PANK1Q8TE04 598 aa17.87■□□□□ 0.45
PRAME-202ENST00000398743 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.87■□□□□ 0.45
PRAME-202ENST00000398743 CLUAP1Q96AJ1 413 aa17.87■□□□□ 0.45
PRAME-202ENST00000398743 PNNQ9H307 717 aaKnown RBP17.87■□□□□ 0.45
PRAME-202ENST00000398743 COG6Q9Y2V7 657 aa17.87■□□□□ 0.45
PRAME-202ENST00000398743 FAM135BQ49AJ0 1406 aa17.86■□□□□ 0.45
PRAME-202ENST00000398743 TECPR2O15040 1411 aa17.85■□□□□ 0.45
PRAME-202ENST00000398743 PPIP5K1Q6PFW1 1433 aa17.85■□□□□ 0.45
PRAME-202ENST00000398743 CT47B1P0C2W7 299 aaPredicted RBP17.85■□□□□ 0.45
PRAME-202ENST00000398743 AAMPQ13685 434 aa17.85■□□□□ 0.45
PRAME-202ENST00000398743 KNDC1Q76NI1 1749 aa17.85■□□□□ 0.45
PRAME-202ENST00000398743 TXNDC2Q86VQ3 553 aa17.84■□□□□ 0.45
PRAME-202ENST00000398743 SIRT1Q96EB6 747 aa17.84■□□□□ 0.45
PRAME-202ENST00000398743 CPSF1Q10570 1443 aaKnown RBP17.84■□□□□ 0.45
PRAME-202ENST00000398743 EDC4Q6P2E9 1401 aaKnown RBP17.84■□□□□ 0.45
PRAME-202ENST00000398743 CDC42BPGQ6DT37 1551 aa17.84■□□□□ 0.45
PRAME-202ENST00000398743 TRIM35Q9UPQ4 493 aa17.84■□□□□ 0.45
PRAME-202ENST00000398743 TMEM2Q9UHN6 1383 aa17.83■□□□□ 0.44
PRAME-202ENST00000398743 BCL2L13Q9BXK5 485 aa17.83■□□□□ 0.44
PRAME-202ENST00000398743 CPS1P31327 1500 aa17.83■□□□□ 0.44
PRAME-202ENST00000398743 FAM161AQ3B820 660 aa17.82■□□□□ 0.44
PRAME-202ENST00000398743 POLKQ9UBT6 870 aa17.82■□□□□ 0.44
PRAME-202ENST00000398743 IL16Q14005 1332 aa17.82■□□□□ 0.44
PRAME-202ENST00000398743 IGHDP01880 384 aa17.81■□□□□ 0.44
PRAME-202ENST00000398743 TSR2Q969E8 191 aaKnown RBP17.81■□□□□ 0.44
PRAME-202ENST00000398743 FCHSD2O94868 740 aa17.81■□□□□ 0.44
PRAME-202ENST00000398743 RGS3P49796 1198 aa17.81■□□□□ 0.44
PRAME-202ENST00000398743 RIPK4P57078 832 aa17.81■□□□□ 0.44
PRAME-202ENST00000398743 UBR1Q8IWV7 1749 aa17.8■□□□□ 0.44
PRAME-202ENST00000398743 NUDT16Q96DE0 195 aaKnown RBP17.8■□□□□ 0.44
PRAME-202ENST00000398743 PPM1GO15355 546 aaPredicted RBP17.8■□□□□ 0.44
PRAME-202ENST00000398743 CCDC61Q9Y6R9 512 aa17.8■□□□□ 0.44
PRAME-202ENST00000398743 LRRC7Q96NW7 1537 aa17.8■□□□□ 0.44
PRAME-202ENST00000398743 RLBP1P12271 317 aa17.79■□□□□ 0.44
PRAME-202ENST00000398743 NEFMP07197 916 aa17.78■□□□□ 0.44
PRAME-202ENST00000398743 EXOSC9Q06265 439 aaKnown RBP17.78■□□□□ 0.44
PRAME-202ENST00000398743 C8orf34Q49A92 452 aa17.78■□□□□ 0.44
PRAME-202ENST00000398743 PMFBP1Q8TBY8 1022 aa17.78■□□□□ 0.44
PRAME-202ENST00000398743 FBLN1P23142 703 aa17.77■□□□□ 0.44
PRAME-202ENST00000398743 ZKSCAN2Q63HK3 967 aa17.77■□□□□ 0.44
PRAME-202ENST00000398743 RSPH6AQ9H0K4 717 aa17.77■□□□□ 0.44
PRAME-202ENST00000398743 TNNQ9UQP3 1299 aa17.77■□□□□ 0.44
PRAME-202ENST00000398743 NME9Q86XW9 330 aa17.77■□□□□ 0.43
PRAME-202ENST00000398743 AATKQ6ZMQ8 1374 aa17.76■□□□□ 0.43
PRAME-202ENST00000398743 DDRGK1Q96HY6 314 aa17.76■□□□□ 0.43
PRAME-202ENST00000398743 PRKAR2BP31323 418 aa17.76■□□□□ 0.43
PRAME-202ENST00000398743 SMC4Q9NTJ3 1288 aa17.76■□□□□ 0.43
PRAME-202ENST00000398743 CDK12Q9NYV4 1490 aaPredicted RBP17.76■□□□□ 0.43
PRAME-202ENST00000398743 ADAMTS13Q76LX8 1427 aa17.75■□□□□ 0.43
PRAME-202ENST00000398743 MON2Q7Z3U7 1717 aa17.75■□□□□ 0.43
PRAME-202ENST00000398743 MVPQ14764 893 aaKnown RBP17.75■□□□□ 0.43
PRAME-202ENST00000398743 FTSJ3Q8IY81 847 aaKnown RBP17.75■□□□□ 0.43
PRAME-202ENST00000398743 COG3Q96JB2 828 aa17.75■□□□□ 0.43
PRAME-202ENST00000398743 EMILIN1Q9Y6C2 1016 aa17.74■□□□□ 0.43
PRAME-202ENST00000398743 ROBO2Q9HCK4 1378 aa17.74■□□□□ 0.43
PRAME-202ENST00000398743 PLEKHG1Q9ULL1 1385 aa17.74■□□□□ 0.43
PRAME-202ENST00000398743 NCKAP5LQ9HCH0 1330 aa17.74■□□□□ 0.43
PRAME-202ENST00000398743 DZIP1LQ8IYY4 767 aaKnown RBP17.74■□□□□ 0.43
PRAME-202ENST00000398743 ZNF692Q9BU19 519 aaPredicted RBP17.74■□□□□ 0.43
PRAME-202ENST00000398743 PCDHB15Q9Y5E8 787 aa17.73■□□□□ 0.43
PRAME-202ENST00000398743 IL13P35225 146 aa17.72■□□□□ 0.43
PRAME-202ENST00000398743 SSH1Q8WYL5 1049 aa17.72■□□□□ 0.43
PRAME-202ENST00000398743 MAP2P11137 1827 aaKnown RBP17.72■□□□□ 0.43
PRAME-202ENST00000398743 PRR36Q9H6K5 1346 aa17.72■□□□□ 0.43
PRAME-202ENST00000398743 NBR1Q14596 966 aa17.72■□□□□ 0.43
PRAME-202ENST00000398743 ZRANB1Q9UGI0 708 aa17.72■□□□□ 0.43
PRAME-202ENST00000398743 C3P01024 1663 aa17.71■□□□□ 0.43
PRAME-202ENST00000398743 ITSN1Q15811 1721 aa17.71■□□□□ 0.43
PRAME-202ENST00000398743 AKAP12Q02952 1782 aa17.71■□□□□ 0.43
PRAME-202ENST00000398743 HMOX1P09601 288 aa17.71■□□□□ 0.43
PRAME-202ENST00000398743 NFE2L2Q16236 605 aa17.71■□□□□ 0.43
PRAME-202ENST00000398743 LTKP29376 864 aa17.7■□□□□ 0.42
PRAME-202ENST00000398743 RWDD1Q9H446 243 aaPredicted RBP17.7■□□□□ 0.42
PRAME-202ENST00000398743 TRIM27P14373 513 aa17.7■□□□□ 0.42
PRAME-202ENST00000398743 ATF7IPQ6VMQ6 1270 aa17.69■□□□□ 0.42
PRAME-202ENST00000398743 KIF16BQ96L93 1317 aa17.69■□□□□ 0.42
PRAME-202ENST00000398743 CALD1Q05682 793 aaKnown RBP17.69■□□□□ 0.42
PRAME-202ENST00000398743 PHACTR3Q96KR7 559 aa17.69■□□□□ 0.42
PRAME-202ENST00000398743 ALDH1L2Q3SY69 923 aa17.68■□□□□ 0.42
PRAME-202ENST00000398743 EID1Q9Y6B2 187 aa17.68■□□□□ 0.42
PRAME-202ENST00000398743 CEBPAP49715 358 aaPredicted RBP17.67■□□□□ 0.42
PRAME-202ENST00000398743 RRS1Q15050 365 aaKnown RBP17.67■□□□□ 0.42
PRAME-202ENST00000398743 NOB1Q9ULX3 412 aaKnown RBP17.67■□□□□ 0.42
PRAME-202ENST00000398743 DDX19BQ9UMR2 479 aa17.67■□□□□ 0.42
PRAME-202ENST00000398743 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.67■□□□□ 0.42
PRAME-202ENST00000398743 ZNF428Q96B54 188 aa17.66■□□□□ 0.42
PRAME-202ENST00000398743 TOPAZ1Q8N9V7 1692 aa17.66■□□□□ 0.42
PRAME-202ENST00000398743 IPO8O15397 1037 aaKnown RBP17.66■□□□□ 0.42
PRAME-202ENST00000398743 ITPRIPQ8IWB1 547 aa17.66■□□□□ 0.42
PRAME-202ENST00000398743 LAS1LQ9Y4W2 734 aaKnown RBP17.65■□□□□ 0.42
PRAME-202ENST00000398743 NRKQ7Z2Y5 1582 aa17.65■□□□□ 0.42
PRAME-202ENST00000398743 PLEKHG3A1L390 1219 aa17.64■□□□□ 0.42
PRAME-202ENST00000398743 SLC26A8Q96RN1 970 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms