RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 BECN1Q14457 450 aa16.73■□□□□ 0.27
PRAME-201ENST00000398741 PDZRN3Q9UPQ7 1066 aa16.73■□□□□ 0.27
PRAME-201ENST00000398741 VIRMAQ69YN4 1812 aaKnown RBP16.73■□□□□ 0.27
PRAME-201ENST00000398741 MLECQ14165 292 aa16.72■□□□□ 0.27
PRAME-201ENST00000398741 POGKQ9P215 609 aa16.72■□□□□ 0.27
PRAME-201ENST00000398741 ZMYM3Q14202 1370 aa16.72■□□□□ 0.27
PRAME-201ENST00000398741 SEC24BO95487 1268 aa16.72■□□□□ 0.27
PRAME-201ENST00000398741 DZIP1LQ8IYY4 767 aaKnown RBP16.72■□□□□ 0.27
PRAME-201ENST00000398741 TSR2Q969E8 191 aaKnown RBP16.72■□□□□ 0.27
PRAME-201ENST00000398741 MINK1Q8N4C8 1332 aaPredicted RBP16.71■□□□□ 0.27
PRAME-201ENST00000398741 PREX1Q8TCU6 1659 aa16.71■□□□□ 0.27
PRAME-201ENST00000398741 SMC4Q9NTJ3 1288 aa16.71■□□□□ 0.27
PRAME-201ENST00000398741 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
PRAME-201ENST00000398741 TMPOP42166 694 aaKnown RBP16.7■□□□□ 0.26
PRAME-201ENST00000398741 PRAM1Q96QH2 718 aa16.7■□□□□ 0.26
PRAME-201ENST00000398741 PLEKHF1Q96S99 279 aa16.7■□□□□ 0.26
PRAME-201ENST00000398741 EXOSC9Q06265 439 aaKnown RBP16.69■□□□□ 0.26
PRAME-201ENST00000398741 HDGFL2Q7Z4V5 671 aaPredicted RBP16.69■□□□□ 0.26
PRAME-201ENST00000398741 FYB1O15117 783 aa16.68■□□□□ 0.26
PRAME-201ENST00000398741 FRAT2O75474 233 aaPredicted RBP16.68■□□□□ 0.26
PRAME-201ENST00000398741 PTPRMP28827 1452 aa16.68■□□□□ 0.26
PRAME-201ENST00000398741 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
PRAME-201ENST00000398741 YTHDC2Q9H6S0 1430 aaKnown RBP16.67■□□□□ 0.26
PRAME-201ENST00000398741 COL3A1P02461 1466 aaPredicted RBP16.67■□□□□ 0.26
PRAME-201ENST00000398741 TRIM35Q9UPQ4 493 aa16.67■□□□□ 0.26
PRAME-201ENST00000398741 MED14O60244 1454 aa16.67■□□□□ 0.26
PRAME-201ENST00000398741 IL16Q14005 1332 aa16.66■□□□□ 0.26
PRAME-201ENST00000398741 DIAPH1O60610 1272 aaKnown RBP16.66■□□□□ 0.26
PRAME-201ENST00000398741 FBXO31Q5XUX0 539 aaPredicted RBP16.66■□□□□ 0.26
PRAME-201ENST00000398741 NLRP1Q9C000 1473 aa16.65■□□□□ 0.26
PRAME-201ENST00000398741 TRIM27P14373 513 aa16.65■□□□□ 0.26
PRAME-201ENST00000398741 RIPK4P57078 832 aa16.65■□□□□ 0.26
PRAME-201ENST00000398741 ITPRIPQ8IWB1 547 aa16.65■□□□□ 0.26
PRAME-201ENST00000398741 IL27Q8NEV9 243 aa16.65■□□□□ 0.26
PRAME-201ENST00000398741 DDX19BQ9UMR2 479 aa16.65■□□□□ 0.26
PRAME-201ENST00000398741 SSH1Q8WYL5 1049 aa16.65■□□□□ 0.26
PRAME-201ENST00000398741 STAG3Q9UJ98 1225 aa16.64■□□□□ 0.25
PRAME-201ENST00000398741 TMEM131LA2VDJ0 1609 aa16.64■□□□□ 0.25
PRAME-201ENST00000398741 ATF7IPQ6VMQ6 1270 aa16.64■□□□□ 0.25
PRAME-201ENST00000398741 TBC1D32Q96NH3 1257 aa16.64■□□□□ 0.25
PRAME-201ENST00000398741 CDK19Q9BWU1 502 aa16.64■□□□□ 0.25
PRAME-201ENST00000398741 CD163L1Q9NR16 1453 aa16.63■□□□□ 0.25
PRAME-201ENST00000398741 SPATA31D1Q6ZQQ2 1576 aa16.62■□□□□ 0.25
PRAME-201ENST00000398741 SLKQ9H2G2 1235 aaPredicted RBP16.62■□□□□ 0.25
PRAME-201ENST00000398741 NOB1Q9ULX3 412 aaKnown RBP16.62■□□□□ 0.25
PRAME-201ENST00000398741 MYO5BQ9ULV0 1848 aa16.61■□□□□ 0.25
PRAME-201ENST00000398741 KIF16BQ96L93 1317 aa16.61■□□□□ 0.25
PRAME-201ENST00000398741 HDAC1Q13547 482 aaPredicted RBP16.61■□□□□ 0.25
PRAME-201ENST00000398741 CABP1Q9NZU7 370 aa16.61■□□□□ 0.25
PRAME-201ENST00000398741 ANKRD26Q9UPS8 1709 aa16.61■□□□□ 0.25
PRAME-201ENST00000398741 IPO8O15397 1037 aaKnown RBP16.61■□□□□ 0.25
PRAME-201ENST00000398741 PNPLA6Q8IY17 1366 aa16.6■□□□□ 0.25
PRAME-201ENST00000398741 ALKQ9UM73 1620 aa16.59■□□□□ 0.25
PRAME-201ENST00000398741 FCHSD2O94868 740 aa16.59■□□□□ 0.25
PRAME-201ENST00000398741 TMEM57Q8N5G2 664 aa16.58■□□□□ 0.25
PRAME-201ENST00000398741 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.58■□□□□ 0.24
PRAME-201ENST00000398741 ALDH1L2Q3SY69 923 aa16.57■□□□□ 0.24
PRAME-201ENST00000398741 ESF1Q9H501 851 aaKnown RBP16.57■□□□□ 0.24
PRAME-201ENST00000398741 RTN4Q9NQC3 1192 aaKnown RBP16.57■□□□□ 0.24
PRAME-201ENST00000398741 TBC1D2Q9BYX2 928 aa16.57■□□□□ 0.24
PRAME-201ENST00000398741 PRKAR2BP31323 418 aa16.56■□□□□ 0.24
PRAME-201ENST00000398741 BRPF3Q9ULD4 1205 aa16.56■□□□□ 0.24
PRAME-201ENST00000398741 FER1L4A9Z1Z3 1794 aa16.56■□□□□ 0.24
PRAME-201ENST00000398741 MFAP1P55081 439 aaKnown RBP16.55■□□□□ 0.24
PRAME-201ENST00000398741 SMC5Q8IY18 1101 aa16.55■□□□□ 0.24
PRAME-201ENST00000398741 C22orf23Q9BZE7 217 aa16.54■□□□□ 0.24
PRAME-201ENST00000398741 RSPH6AQ9H0K4 717 aa16.54■□□□□ 0.24
PRAME-201ENST00000398741 ZBTB40Q9NUA8 1239 aa16.54■□□□□ 0.24
PRAME-201ENST00000398741 LRRC7Q96NW7 1537 aa16.54■□□□□ 0.24
PRAME-201ENST00000398741 KIF20BQ96Q89 1820 aa16.54■□□□□ 0.24
PRAME-201ENST00000398741 FAM135BQ49AJ0 1406 aa16.54■□□□□ 0.24
PRAME-201ENST00000398741 CDC42BPGQ6DT37 1551 aa16.53■□□□□ 0.24
PRAME-201ENST00000398741 ZNF428Q96B54 188 aa16.53■□□□□ 0.24
PRAME-201ENST00000398741 ANTXR1Q9H6X2 564 aa16.53■□□□□ 0.24
PRAME-201ENST00000398741 POLKQ9UBT6 870 aa16.53■□□□□ 0.24
PRAME-201ENST00000398741 ATP7BP35670 1465 aa16.53■□□□□ 0.24
PRAME-201ENST00000398741 C3P01024 1663 aa16.53■□□□□ 0.24
PRAME-201ENST00000398741 CALD1Q05682 793 aaKnown RBP16.53■□□□□ 0.24
PRAME-201ENST00000398741 WAPLQ7Z5K2 1190 aa16.53■□□□□ 0.24
PRAME-201ENST00000398741 NFE2L2Q16236 605 aa16.51■□□□□ 0.23
PRAME-201ENST00000398741 DLC1Q96QB1 1528 aa16.51■□□□□ 0.23
PRAME-201ENST00000398741 HMOX1P09601 288 aa16.5■□□□□ 0.23
PRAME-201ENST00000398741 FBLN1P23142 703 aa16.5■□□□□ 0.23
PRAME-201ENST00000398741 CEBPAP49715 358 aaPredicted RBP16.5■□□□□ 0.23
PRAME-201ENST00000398741 CHMP4BQ9H444 224 aaKnown RBP16.5■□□□□ 0.23
PRAME-201ENST00000398741 NUCB1Q02818 461 aa16.49■□□□□ 0.23
PRAME-201ENST00000398741 SPRYD3Q8NCJ5 442 aa16.49■□□□□ 0.23
PRAME-201ENST00000398741 A2ML1A8K2U0 1454 aa16.49■□□□□ 0.23
PRAME-201ENST00000398741 PPIP5K1Q6PFW1 1433 aa16.49■□□□□ 0.23
PRAME-201ENST00000398741 RIMS2Q9UQ26 1411 aa16.49■□□□□ 0.23
PRAME-201ENST00000398741 BRPF1P55201 1214 aaPredicted RBP16.49■□□□□ 0.23
PRAME-201ENST00000398741 GNAI1P63096 354 aa16.48■□□□□ 0.23
PRAME-201ENST00000398741 PHACTR3Q96KR7 559 aa16.48■□□□□ 0.23
PRAME-201ENST00000398741 TNRQ92752 1358 aa16.48■□□□□ 0.23
PRAME-201ENST00000398741 LNPKQ9C0E8 428 aa16.47■□□□□ 0.23
PRAME-201ENST00000398741 EMILIN1Q9Y6C2 1016 aa16.47■□□□□ 0.23
PRAME-201ENST00000398741 CHD1LQ86WJ1 897 aa16.47■□□□□ 0.23
PRAME-201ENST00000398741 IFT57Q9NWB7 429 aa16.47■□□□□ 0.23
PRAME-201ENST00000398741 EDC4Q6P2E9 1401 aaKnown RBP16.47■□□□□ 0.23
PRAME-201ENST00000398741 HSCBQ8IWL3 235 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms