RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 TRIM44Q96DX7 344 aaPredicted RBP13.84□□□□□ -0.19
IFT140-202ENST00000397417 SIL1Q9H173 461 aa13.84□□□□□ -0.19
IFT140-202ENST00000397417 RPGRIP1LQ68CZ1 1315 aa13.84□□□□□ -0.19
IFT140-202ENST00000397417 SSH1Q8WYL5 1049 aa13.84□□□□□ -0.19
IFT140-202ENST00000397417 NUP160Q12769 1436 aa13.83□□□□□ -0.19
IFT140-202ENST00000397417 PTMAP06454 111 aaKnown RBP13.83□□□□□ -0.19
IFT140-202ENST00000397417 MPRIPQ6WCQ1 1025 aa13.83□□□□□ -0.19
IFT140-202ENST00000397417 API5Q9BZZ5 524 aaKnown RBP13.83□□□□□ -0.19
IFT140-202ENST00000397417 FYB1O15117 783 aa13.83□□□□□ -0.2
IFT140-202ENST00000397417 MAP4K4O95819 1239 aaPredicted RBP13.83□□□□□ -0.2
IFT140-202ENST00000397417 MCCP23508 829 aa13.83□□□□□ -0.2
IFT140-202ENST00000397417 SLFN5Q08AF3 891 aa13.83□□□□□ -0.2
IFT140-202ENST00000397417 NEXNQ0ZGT2 675 aa13.83□□□□□ -0.2
IFT140-202ENST00000397417 ANO2Q9NQ90 1003 aa13.83□□□□□ -0.2
IFT140-202ENST00000397417 ZNF692Q9BU19 519 aaPredicted RBP13.82□□□□□ -0.2
IFT140-202ENST00000397417 ACEP12821 1306 aa13.82□□□□□ -0.2
IFT140-202ENST00000397417 SURF6O75683 361 aaKnown RBP13.82□□□□□ -0.2
IFT140-202ENST00000397417 NEUROD6Q96NK8 337 aa13.82□□□□□ -0.2
IFT140-202ENST00000397417 TMEM57Q8N5G2 664 aa13.82□□□□□ -0.2
IFT140-202ENST00000397417 WDR7Q9Y4E6 1490 aa13.82□□□□□ -0.2
IFT140-202ENST00000397417 KRT24Q2M2I5 525 aa13.81□□□□□ -0.2
IFT140-202ENST00000397417 A2MP01023 1474 aa13.81□□□□□ -0.2
IFT140-202ENST00000397417 KIF16BQ96L93 1317 aa13.81□□□□□ -0.2
IFT140-202ENST00000397417 IL1RAPL2Q9NP60 686 aa13.81□□□□□ -0.2
IFT140-202ENST00000397417 CEP170Q5SW79 1584 aa13.81□□□□□ -0.2
IFT140-202ENST00000397417 KDM4AO75164 1064 aa13.8□□□□□ -0.2
IFT140-202ENST00000397417 PHF8Q9UPP1 1060 aa13.8□□□□□ -0.2
IFT140-202ENST00000397417 ATAD2Q6PL18 1390 aa13.8□□□□□ -0.2
IFT140-202ENST00000397417 GOLGA6L4A6NEF3 574 aa13.8□□□□□ -0.2
IFT140-202ENST00000397417 PIP4K2AP48426 406 aaPredicted RBP13.8□□□□□ -0.2
IFT140-202ENST00000397417 JARID2Q92833 1246 aaPredicted RBP13.8□□□□□ -0.2
IFT140-202ENST00000397417 SPINK5Q9NQ38 1064 aaPredicted RBP13.8□□□□□ -0.2
IFT140-202ENST00000397417 FAM135AQ9P2D6 1515 aa13.79□□□□□ -0.2
IFT140-202ENST00000397417 RALGAPBQ86X10 1494 aa13.79□□□□□ -0.2
IFT140-202ENST00000397417 UBTFL1P0CB47 393 aaPredicted RBP13.79□□□□□ -0.2
IFT140-202ENST00000397417 FOSBP53539 338 aa13.79□□□□□ -0.2
IFT140-202ENST00000397417 ATF7IPQ6VMQ6 1270 aa13.79□□□□□ -0.2
IFT140-202ENST00000397417 MEX3CQ5U5Q3 659 aaKnown RBP13.79□□□□□ -0.2
IFT140-202ENST00000397417 ITSN2Q9NZM3 1697 aa13.79□□□□□ -0.2
IFT140-202ENST00000397417 HSP90B1P14625 803 aaKnown RBP13.79□□□□□ -0.2
IFT140-202ENST00000397417 EXOC6BQ9Y2D4 811 aa13.79□□□□□ -0.2
IFT140-202ENST00000397417 DDX17Q92841 729 aaKnown RBP13.78□□□□□ -0.2
IFT140-202ENST00000397417 KCNA6P17658 529 aa13.78□□□□□ -0.2
IFT140-202ENST00000397417 DUSP27Q5VZP5 1158 aa13.78□□□□□ -0.2
IFT140-202ENST00000397417 GAS2L2Q8NHY3 880 aa13.77□□□□□ -0.2
IFT140-202ENST00000397417 IFIT2P09913 472 aaKnown RBP13.77□□□□□ -0.21
IFT140-202ENST00000397417 NFE2L2Q16236 605 aa13.77□□□□□ -0.21
IFT140-202ENST00000397417 SMARCA5O60264 1052 aaPredicted RBP13.76□□□□□ -0.21
IFT140-202ENST00000397417 ZRSR1Q15695 479 aaKnown RBP13.76□□□□□ -0.21
IFT140-202ENST00000397417 PRAG1Q86YV5 1406 aa13.76□□□□□ -0.21
IFT140-202ENST00000397417 DMRT2Q9Y5R5 561 aa13.76□□□□□ -0.21
IFT140-202ENST00000397417 FCHSD2O94868 740 aa13.76□□□□□ -0.21
IFT140-202ENST00000397417 PLEKHO1Q53GL0 409 aaPredicted RBP13.76□□□□□ -0.21
IFT140-202ENST00000397417 LRRC59Q96AG4 307 aaKnown RBP13.76□□□□□ -0.21
IFT140-202ENST00000397417 SCAF11Q99590 1463 aaKnown RBP13.76□□□□□ -0.21
IFT140-202ENST00000397417 RARSP54136 660 aaKnown RBP13.75□□□□□ -0.21
IFT140-202ENST00000397417 CHMP4CQ96CF2 233 aa13.75□□□□□ -0.21
IFT140-202ENST00000397417 PER1O15534 1290 aaPredicted RBP13.75□□□□□ -0.21
IFT140-202ENST00000397417 STK11IPQ8N1F8 1099 aa13.75□□□□□ -0.21
IFT140-202ENST00000397417 KLHL34Q8N239 644 aa13.75□□□□□ -0.21
IFT140-202ENST00000397417 PHACTR3Q96KR7 559 aa13.75□□□□□ -0.21
IFT140-202ENST00000397417 DIAPH3Q9NSV4 1193 aa13.75□□□□□ -0.21
IFT140-202ENST00000397417 TATP17735 454 aaPredicted RBP13.74□□□□□ -0.21
IFT140-202ENST00000397417 ADGRL2O95490 1459 aa13.74□□□□□ -0.21
IFT140-202ENST00000397417 G3BP1Q13283 466 aaKnown RBP eCLIP13.74□□□□□ -0.21
IFT140-202ENST00000397417 RNF123Q5XPI4 1314 aa13.74□□□□□ -0.21
IFT140-202ENST00000397417 DNTTIP2Q5QJE6 756 aaKnown RBP13.74□□□□□ -0.21
IFT140-202ENST00000397417 ERCC6L2Q5T890 1561 aa13.74□□□□□ -0.21
IFT140-202ENST00000397417 BTBD11A6QL63 1104 aa13.74□□□□□ -0.21
IFT140-202ENST00000397417 APPP05067 770 aa13.74□□□□□ -0.21
IFT140-202ENST00000397417 TSHZ3Q63HK5 1081 aa13.74□□□□□ -0.21
IFT140-202ENST00000397417 GPATCH3Q96I76 525 aa13.73□□□□□ -0.21
IFT140-202ENST00000397417 POGZQ7Z3K3 1410 aa13.73□□□□□ -0.21
IFT140-202ENST00000397417 CABP4P57796 275 aa13.73□□□□□ -0.21
IFT140-202ENST00000397417 CCDC30Q5VVM6 783 aa13.73□□□□□ -0.21
IFT140-202ENST00000397417 UHRF1BP1Q6BDS2 1440 aa13.73□□□□□ -0.21
IFT140-202ENST00000397417 DDX58O95786 925 aaKnown RBP13.73□□□□□ -0.21
IFT140-202ENST00000397417 MVPQ14764 893 aaKnown RBP13.73□□□□□ -0.21
IFT140-202ENST00000397417 BACH2Q9BYV9 841 aa13.73□□□□□ -0.21
IFT140-202ENST00000397417 ABCC2Q92887 1545 aa13.72□□□□□ -0.21
IFT140-202ENST00000397417 TNRQ92752 1358 aa13.72□□□□□ -0.21
IFT140-202ENST00000397417 GNL2Q13823 731 aaKnown RBP13.72□□□□□ -0.21
IFT140-202ENST00000397417 C22orf23Q9BZE7 217 aa13.72□□□□□ -0.21
IFT140-202ENST00000397417 WDR63Q8IWG1 891 aa13.71□□□□□ -0.21
IFT140-202ENST00000397417 POLKQ9UBT6 870 aa13.71□□□□□ -0.21
IFT140-202ENST00000397417 TRIM27P14373 513 aa13.71□□□□□ -0.21
IFT140-202ENST00000397417 SLC39A6Q13433 755 aa13.71□□□□□ -0.21
IFT140-202ENST00000397417 BICDL1Q6ZP65 573 aa13.71□□□□□ -0.22
IFT140-202ENST00000397417 KRT28Q7Z3Y7 464 aa13.71□□□□□ -0.22
IFT140-202ENST00000397417 DNAJC2Q99543 621 aaKnown RBP13.71□□□□□ -0.22
IFT140-202ENST00000397417 MTMR7Q9Y216 660 aa13.71□□□□□ -0.22
IFT140-202ENST00000397417 CHD1O14646 1710 aa13.71□□□□□ -0.22
IFT140-202ENST00000397417 ZNF518AQ6AHZ1 1483 aa13.7□□□□□ -0.22
IFT140-202ENST00000397417 TSPYL6Q8N831 410 aa13.7□□□□□ -0.22
IFT140-202ENST00000397417 ORAI2Q96SN7 254 aa13.7□□□□□ -0.22
IFT140-202ENST00000397417 LRPPRCP42704 1394 aaKnown RBP13.7□□□□□ -0.22
IFT140-202ENST00000397417 YEATS2Q9ULM3 1422 aa13.7□□□□□ -0.22
IFT140-202ENST00000397417 ZMYM3Q14202 1370 aa13.7□□□□□ -0.22
IFT140-202ENST00000397417 ABCC10Q5T3U5 1492 aa13.7□□□□□ -0.22
IFT140-202ENST00000397417 RAD21O60216 631 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms