RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 UBR1Q8IWV7 1749 aa21.46■■□□□ 1.03
TRIM39-205ENST00000396551 TNRQ92752 1358 aa21.45■■□□□ 1.02
TRIM39-205ENST00000396551 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.44■■□□□ 1.02
TRIM39-205ENST00000396551 TMPOP42166 694 aaKnown RBP21.44■■□□□ 1.02
TRIM39-205ENST00000396551 NPM2Q86SE8 214 aaKnown RBP21.44■■□□□ 1.02
TRIM39-205ENST00000396551 COG6Q9Y2V7 657 aa21.44■■□□□ 1.02
TRIM39-205ENST00000396551 CANXP27824 592 aaKnown RBP21.43■■□□□ 1.02
TRIM39-205ENST00000396551 MAP2P11137 1827 aaKnown RBP21.43■■□□□ 1.02
TRIM39-205ENST00000396551 CDC42BPGQ6DT37 1551 aa21.43■■□□□ 1.02
TRIM39-205ENST00000396551 CPSF1Q10570 1443 aaKnown RBP21.43■■□□□ 1.02
TRIM39-205ENST00000396551 WASLO00401 505 aaPredicted RBP21.43■■□□□ 1.02
TRIM39-205ENST00000396551 TXNDC2Q86VQ3 553 aa21.43■■□□□ 1.02
TRIM39-205ENST00000396551 FRAT1Q92837 279 aaPredicted RBP21.43■■□□□ 1.02
TRIM39-205ENST00000396551 MYH16Q9H6N6 1097 aa21.43■■□□□ 1.02
TRIM39-205ENST00000396551 TRIM35Q9UPQ4 493 aa21.43■■□□□ 1.02
TRIM39-205ENST00000396551 DIAPH1O60610 1272 aaKnown RBP21.42■■□□□ 1.02
TRIM39-205ENST00000396551 TNNQ9UQP3 1299 aa21.42■■□□□ 1.02
TRIM39-205ENST00000396551 CPS1P31327 1500 aa21.42■■□□□ 1.02
TRIM39-205ENST00000396551 FBLN1P23142 703 aa21.42■■□□□ 1.02
TRIM39-205ENST00000396551 TECPR2O15040 1411 aa21.42■■□□□ 1.02
TRIM39-205ENST00000396551 PPIP5K1Q6PFW1 1433 aa21.42■■□□□ 1.02
TRIM39-205ENST00000396551 IGHDP01880 384 aa21.41■■□□□ 1.02
TRIM39-205ENST00000396551 BCL2L13Q9BXK5 485 aa21.41■■□□□ 1.02
TRIM39-205ENST00000396551 FAM135BQ49AJ0 1406 aa21.4■■□□□ 1.02
TRIM39-205ENST00000396551 CLUAP1Q96AJ1 413 aa21.4■■□□□ 1.02
TRIM39-205ENST00000396551 LRRC7Q96NW7 1537 aa21.39■■□□□ 1.02
TRIM39-205ENST00000396551 RLBP1P12271 317 aa21.39■■□□□ 1.02
TRIM39-205ENST00000396551 POLKQ9UBT6 870 aa21.39■■□□□ 1.02
TRIM39-205ENST00000396551 MON2Q7Z3U7 1717 aa21.39■■□□□ 1.01
TRIM39-205ENST00000396551 TSR2Q969E8 191 aaKnown RBP21.39■■□□□ 1.01
TRIM39-205ENST00000396551 MAPK8IP3Q9UPT6 1336 aa21.39■■□□□ 1.01
TRIM39-205ENST00000396551 TMEM2Q9UHN6 1383 aa21.39■■□□□ 1.01
TRIM39-205ENST00000396551 EDC4Q6P2E9 1401 aaKnown RBP21.38■■□□□ 1.01
TRIM39-205ENST00000396551 ZBTB47Q9UFB7 747 aaPredicted RBP21.38■■□□□ 1.01
TRIM39-205ENST00000396551 AKAP12Q02952 1782 aa21.37■■□□□ 1.01
TRIM39-205ENST00000396551 NCKAP5LQ9HCH0 1330 aa21.37■■□□□ 1.01
TRIM39-205ENST00000396551 SIRT1Q96EB6 747 aa21.37■■□□□ 1.01
TRIM39-205ENST00000396551 NUDT16Q96DE0 195 aaKnown RBP21.36■■□□□ 1.01
TRIM39-205ENST00000396551 HDGFP51858 240 aaKnown RBP21.35■■□□□ 1.01
TRIM39-205ENST00000396551 ADAMTS13Q76LX8 1427 aa21.35■■□□□ 1.01
TRIM39-205ENST00000396551 NME9Q86XW9 330 aa21.35■■□□□ 1.01
TRIM39-205ENST00000396551 RGS3P49796 1198 aa21.34■■□□□ 1.01
TRIM39-205ENST00000396551 ZRANB1Q9UGI0 708 aa21.34■■□□□ 1.01
TRIM39-205ENST00000396551 ITSN1Q15811 1721 aa21.34■■□□□ 1.01
TRIM39-205ENST00000396551 RIPK4P57078 832 aa21.34■■□□□ 1.01
TRIM39-205ENST00000396551 EXOSC9Q06265 439 aaKnown RBP21.34■■□□□ 1.01
TRIM39-205ENST00000396551 C8orf34Q49A92 452 aa21.34■■□□□ 1.01
TRIM39-205ENST00000396551 C3P01024 1663 aa21.33■■□□□ 1.01
TRIM39-205ENST00000396551 IL16Q14005 1332 aa21.33■■□□□ 1.01
TRIM39-205ENST00000396551 PPM1GO15355 546 aaPredicted RBP21.33■■□□□ 1
TRIM39-205ENST00000396551 RSPH6AQ9H0K4 717 aa21.33■■□□□ 1
TRIM39-205ENST00000396551 ROBO2Q9HCK4 1378 aa21.33■■□□□ 1
TRIM39-205ENST00000396551 FCHSD2O94868 740 aa21.32■■□□□ 1
TRIM39-205ENST00000396551 CT47B1P0C2W7 299 aaPredicted RBP21.32■■□□□ 1
TRIM39-205ENST00000396551 FAM161AQ3B820 660 aa21.32■■□□□ 1
TRIM39-205ENST00000396551 EMILIN1Q9Y6C2 1016 aa21.32■■□□□ 1
TRIM39-205ENST00000396551 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.32■■□□□ 1
TRIM39-205ENST00000396551 PRR36Q9H6K5 1346 aa21.32■■□□□ 1
TRIM39-205ENST00000396551 PNNQ9H307 717 aaKnown RBP21.31■■□□□ 1
TRIM39-205ENST00000396551 CCDC61Q9Y6R9 512 aa21.31■■□□□ 1
TRIM39-205ENST00000396551 PRKAR2BP31323 418 aa21.3■■□□□ 1
TRIM39-205ENST00000396551 PCDHB15Q9Y5E8 787 aa21.3■■□□□ 1
TRIM39-205ENST00000396551 CDK12Q9NYV4 1490 aaPredicted RBP21.29■■□□□ 1
TRIM39-205ENST00000396551 LTKP29376 864 aa21.29■■□□□ 1
TRIM39-205ENST00000396551 VIRMAQ69YN4 1812 aaKnown RBP21.29■■□□□ 1
TRIM39-205ENST00000396551 AATKQ6ZMQ8 1374 aa21.28■■□□□ 1
TRIM39-205ENST00000396551 AAMPQ13685 434 aa21.28■■□□□ 1
TRIM39-205ENST00000396551 PLEKHG1Q9ULL1 1385 aa21.28■■□□□ 1
TRIM39-205ENST00000396551 ZKSCAN2Q63HK3 967 aa21.27■■□□□ 1
TRIM39-205ENST00000396551 TOPAZ1Q8N9V7 1692 aa21.27■■□□□ 1
TRIM39-205ENST00000396551 CEBPAP49715 358 aaPredicted RBP21.27■■□□□ 1
TRIM39-205ENST00000396551 SSH1Q8WYL5 1049 aa21.27■■□□□ 1
TRIM39-205ENST00000396551 IL13P35225 146 aa21.27■□□□□ 0.99
TRIM39-205ENST00000396551 HMOX1P09601 288 aa21.26■□□□□ 0.99
TRIM39-205ENST00000396551 PHACTR3Q96KR7 559 aa21.26■□□□□ 0.99
TRIM39-205ENST00000396551 SMC4Q9NTJ3 1288 aa21.26■□□□□ 0.99
TRIM39-205ENST00000396551 MVPQ14764 893 aaKnown RBP21.26■□□□□ 0.99
TRIM39-205ENST00000396551 NRKQ7Z2Y5 1582 aa21.26■□□□□ 0.99
TRIM39-205ENST00000396551 PMFBP1Q8TBY8 1022 aa21.25■□□□□ 0.99
TRIM39-205ENST00000396551 DZIP1LQ8IYY4 767 aaKnown RBP21.24■□□□□ 0.99
TRIM39-205ENST00000396551 COG3Q96JB2 828 aa21.24■□□□□ 0.99
TRIM39-205ENST00000396551 PTPRUQ92729 1446 aa21.24■□□□□ 0.99
TRIM39-205ENST00000396551 RRS1Q15050 365 aaKnown RBP21.23■□□□□ 0.99
TRIM39-205ENST00000396551 DLG5Q8TDM6 1919 aa21.23■□□□□ 0.99
TRIM39-205ENST00000396551 TRIM27P14373 513 aa21.23■□□□□ 0.99
TRIM39-205ENST00000396551 NFE2L2Q16236 605 aa21.22■□□□□ 0.99
TRIM39-205ENST00000396551 NBR1Q14596 966 aa21.22■□□□□ 0.99
TRIM39-205ENST00000396551 ZNF692Q9BU19 519 aaPredicted RBP21.22■□□□□ 0.99
TRIM39-205ENST00000396551 FTSJ3Q8IY81 847 aaKnown RBP21.21■□□□□ 0.99
TRIM39-205ENST00000396551 SLC26A8Q96RN1 970 aa21.19■□□□□ 0.98
TRIM39-205ENST00000396551 NOB1Q9ULX3 412 aaKnown RBP21.19■□□□□ 0.98
TRIM39-205ENST00000396551 SLIT1O75093 1534 aa21.19■□□□□ 0.98
TRIM39-205ENST00000396551 ATF7IPQ6VMQ6 1270 aa21.19■□□□□ 0.98
TRIM39-205ENST00000396551 ARHGAP23Q9P227 1491 aa21.19■□□□□ 0.98
TRIM39-205ENST00000396551 FER1L4A9Z1Z3 1794 aa21.19■□□□□ 0.98
TRIM39-205ENST00000396551 NEFMP07197 916 aa21.19■□□□□ 0.98
TRIM39-205ENST00000396551 THUMPD2Q9BTF0 503 aaKnown RBP21.19■□□□□ 0.98
TRIM39-205ENST00000396551 DDRGK1Q96HY6 314 aa21.18■□□□□ 0.98
TRIM39-205ENST00000396551 ACEP12821 1306 aa21.17■□□□□ 0.98
TRIM39-205ENST00000396551 TTC21BQ7Z4L5 1316 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms